Wall clock time and date at job start Sun Mar 7 2021 06:26:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46894 * 1 3 3 C 1.46895 * 111.00366 * 2 1 4 4 C 1.39049 * 110.99608 * 123.95322 * 2 1 3 5 5 C 1.39207 * 119.93223 * 120.02401 * 4 2 1 6 6 C 1.50699 * 119.96124 * 0.02562 * 5 4 2 7 7 O 1.42894 * 109.47164 * 75.00327 * 6 5 4 8 8 Si 1.86303 * 109.46593 * 195.00351 * 6 5 4 9 9 C 1.37630 * 120.06973 * 179.76126 * 5 4 2 10 10 C 1.39781 * 119.92705 * 0.48824 * 9 5 4 11 11 C 1.47520 * 120.06155 * 179.76500 * 10 9 5 12 12 O 1.21594 * 120.00866 * 359.72288 * 11 10 9 13 13 N 1.34779 * 119.99594 * 179.72002 * 11 10 9 14 14 C 1.46506 * 120.00065 * 179.97438 * 13 11 10 15 15 H 1.09003 * 112.84662 * 23.80940 * 14 13 11 16 16 C 1.53780 * 113.61173 * 155.00258 * 14 13 11 17 17 C 1.53779 * 87.07818 * 139.98483 * 16 14 13 18 18 H 1.09001 * 113.61514 * 89.19942 * 17 16 14 19 19 C 1.53006 * 113.61334 * 220.01959 * 17 16 14 20 20 N 1.46898 * 109.47006 * 184.99842 * 19 17 16 21 21 H 1.00907 * 109.46945 * 55.00252 * 20 19 17 22 22 C 1.46905 * 109.47110 * 174.99627 * 20 19 17 23 23 C 1.46895 * 109.47492 * 294.99809 * 20 19 17 24 24 C 1.53779 * 113.61404 * 252.49954 * 14 13 11 25 25 C 1.39806 * 119.86311 * 359.48906 * 10 9 5 26 26 C 1.37588 * 119.93625 * 0.25294 * 25 10 9 27 27 H 1.09001 * 109.47141 * 296.05363 * 1 2 3 28 28 H 1.09003 * 109.46805 * 56.04779 * 1 2 3 29 29 H 1.09001 * 109.47391 * 176.04886 * 1 2 3 30 30 H 1.09000 * 109.47714 * 183.95122 * 3 2 1 31 31 H 1.08999 * 109.46799 * 303.94972 * 3 2 1 32 32 H 1.09001 * 109.47222 * 63.95163 * 3 2 1 33 33 H 1.09006 * 109.47318 * 314.99752 * 6 5 4 34 34 H 0.96700 * 113.99967 * 179.97438 * 7 6 5 35 35 H 1.48499 * 110.00121 * 299.99664 * 8 6 5 36 36 H 1.48491 * 110.00310 * 61.32047 * 8 6 5 37 37 H 1.08000 * 120.03214 * 180.22458 * 9 5 4 38 38 H 0.96998 * 120.00085 * 0.02562 * 13 11 10 39 39 H 1.08997 * 113.61807 * 25.43836 * 16 14 13 40 40 H 1.08995 * 113.61266 * 254.53018 * 16 14 13 41 41 H 1.09001 * 109.47002 * 304.99624 * 19 17 16 42 42 H 1.08993 * 109.46955 * 65.00062 * 19 17 16 43 43 H 1.08998 * 109.47037 * 60.00086 * 22 20 19 44 44 H 1.09000 * 109.47157 * 180.02562 * 22 20 19 45 45 H 1.08998 * 109.47266 * 300.00131 * 22 20 19 46 46 H 1.09000 * 109.46971 * 59.99785 * 23 20 19 47 47 H 1.09000 * 109.47433 * 180.02562 * 23 20 19 48 48 H 1.08998 * 109.46901 * 300.00065 * 23 20 19 49 49 H 1.09008 * 113.61411 * 105.47303 * 24 14 13 50 50 H 1.08990 * 113.61765 * 334.56937 * 24 14 13 51 51 H 1.08007 * 120.03333 * 180.23174 * 25 10 9 52 52 H 1.08000 * 119.96901 * 180.02562 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4689 0.0000 0.0000 3 6 1.9954 1.3714 0.0000 4 6 1.9672 -0.7250 1.0768 5 6 2.7796 -1.8329 0.8520 6 6 3.1182 -2.2441 -0.5577 7 8 4.0875 -1.3432 -1.0969 8 14 3.8133 -3.9726 -0.5502 9 6 3.2783 -2.5496 1.9158 10 6 2.9598 -2.1702 3.2229 11 6 3.4885 -2.9395 4.3652 12 8 4.1979 -3.9076 4.1703 13 7 3.1852 -2.5691 5.6252 14 6 3.7097 -3.3333 6.7597 15 1 4.6180 -3.8842 6.5153 16 6 3.8160 -2.5148 8.0573 17 6 3.3161 -3.7677 8.7956 18 1 4.1163 -4.4378 9.1099 19 6 2.3221 -3.4619 9.9179 20 7 1.9976 -4.7018 10.6359 21 1 2.8492 -5.1355 10.9598 22 6 1.1383 -4.3910 11.7862 23 6 1.2928 -5.6208 9.7324 24 6 2.6457 -4.1823 7.4752 25 6 2.1440 -1.0569 3.4454 26 6 1.6529 -0.3412 2.3779 27 1 -0.3633 0.4514 0.9232 28 1 -0.3633 0.5740 -0.8525 29 1 -0.3634 -1.0252 -0.0708 30 1 3.0828 1.3432 -0.0708 31 1 1.5899 1.9162 -0.8525 32 1 1.7044 1.8723 0.9233 33 1 2.2170 -2.2176 -1.1704 34 1 4.3533 -1.5481 -2.0038 35 1 5.0424 -4.0222 0.2817 36 1 2.8033 -4.9239 -0.0213 37 1 3.9115 -3.4068 1.7407 38 1 2.6190 -1.7970 5.7807 39 1 3.1220 -1.6755 8.1022 40 1 4.8375 -2.2350 8.3145 41 1 2.7650 -2.7463 10.6106 42 1 1.4118 -3.0399 9.4921 43 1 0.2185 -3.9224 11.4364 44 1 0.8980 -5.3109 12.3192 45 1 1.6613 -3.7091 12.4567 46 1 1.9304 -5.8514 8.8789 47 1 1.0517 -6.5406 10.2653 48 1 0.3730 -5.1522 9.3826 49 1 2.7225 -5.2487 7.2625 50 1 1.6319 -3.7989 7.3610 51 1 1.8993 -0.7590 4.4543 52 1 1.0230 0.5192 2.5492 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13422196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:15 Heat of formation + Delta-G solvation = 110.932984 kcal Electronic energy + Delta-G solvation = -29575.918731 eV Core-core repulsion = 25661.878679 eV Total energy + Delta-G solvation = -3914.040053 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.212 amu Computer time = 0.97 seconds Orbital eigenvalues (eV) -42.32835 -41.75341 -40.68723 -39.17037 -37.78290 -37.32984 -35.02367 -33.00025 -31.53312 -30.08763 -29.52706 -28.57967 -26.97793 -26.81521 -26.62963 -25.58325 -24.04267 -23.08867 -22.81417 -21.46481 -20.93383 -19.12439 -18.91004 -18.38068 -18.21478 -17.85952 -17.58035 -17.25168 -16.62580 -16.34225 -16.29501 -16.05509 -15.97235 -15.79156 -15.19939 -14.99091 -14.65388 -14.61464 -14.18434 -13.98536 -13.90409 -13.71118 -13.61907 -13.58134 -13.46617 -13.37644 -13.32108 -13.16568 -13.08566 -12.88726 -12.81207 -12.68634 -12.41094 -12.22872 -12.10602 -11.84764 -11.57261 -11.27811 -10.33562 -10.31732 -10.23274 -9.88935 -9.58049 -5.07410 -0.55012 -0.02405 1.00689 1.22349 1.44222 1.52163 1.84819 1.91151 2.44419 2.70606 2.85625 2.93399 3.16400 3.28270 3.33047 3.41696 3.48444 3.54989 3.65981 3.73248 3.79844 3.91889 3.93781 4.04117 4.11413 4.11925 4.18516 4.30017 4.31949 4.35398 4.37613 4.39127 4.43601 4.53519 4.55979 4.61786 4.64258 4.67404 4.72182 4.73926 4.80343 4.86210 4.86331 4.88495 4.93853 4.95647 4.97075 5.00710 5.08022 5.12839 5.38349 5.44181 5.80371 6.19526 6.27902 6.89017 6.95851 Molecular weight = 335.21amu Principal moments of inertia in cm(-1) A = 0.016857 B = 0.002594 C = 0.002401 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1660.586179 B =10792.262537 C =11659.571007 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 N -0.522 5.522 3 C 0.034 3.966 4 C 0.140 3.860 5 C -0.084 4.084 6 C -0.049 4.049 7 O -0.555 6.555 8 Si 0.750 3.250 9 C -0.085 4.085 10 C -0.156 4.156 11 C 0.559 3.441 12 O -0.586 6.586 13 N -0.696 5.696 14 C 0.090 3.910 15 H 0.083 0.917 16 C -0.125 4.125 17 C -0.115 4.115 18 H 0.126 0.874 19 C 0.013 3.987 20 N -0.370 5.370 21 H 0.438 0.562 22 C -0.046 4.046 23 C -0.058 4.058 24 C -0.152 4.152 25 C -0.050 4.050 26 C -0.156 4.156 27 H 0.046 0.954 28 H 0.085 0.915 29 H 0.067 0.933 30 H 0.059 0.941 31 H 0.084 0.916 32 H 0.042 0.958 33 H 0.090 0.910 34 H 0.400 0.600 35 H -0.302 1.302 36 H -0.292 1.292 37 H 0.110 0.890 38 H 0.418 0.582 39 H 0.118 0.882 40 H 0.079 0.921 41 H 0.151 0.849 42 H 0.141 0.859 43 H 0.120 0.880 44 H 0.123 0.877 45 H 0.128 0.872 46 H 0.113 0.887 47 H 0.126 0.874 48 H 0.123 0.877 49 H 0.076 0.924 50 H 0.114 0.886 51 H 0.175 0.825 52 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -9.167 -4.784 32.236 33.854 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.122 4.122 2 N -0.244 5.244 3 C -0.112 4.112 4 C 0.046 3.954 5 C -0.085 4.085 6 C -0.161 4.161 7 O -0.364 6.364 8 Si 0.658 3.342 9 C -0.104 4.104 10 C -0.159 4.159 11 C 0.347 3.653 12 O -0.468 6.468 13 N -0.348 5.348 14 C -0.015 4.015 15 H 0.101 0.899 16 C -0.164 4.164 17 C -0.134 4.134 18 H 0.144 0.856 19 C -0.109 4.109 20 N 0.053 4.947 21 H 0.275 0.725 22 C -0.188 4.188 23 C -0.200 4.200 24 C -0.190 4.190 25 C -0.069 4.069 26 C -0.176 4.176 27 H 0.064 0.936 28 H 0.103 0.897 29 H 0.086 0.914 30 H 0.078 0.922 31 H 0.103 0.897 32 H 0.061 0.939 33 H 0.108 0.892 34 H 0.250 0.750 35 H -0.231 1.231 36 H -0.219 1.219 37 H 0.127 0.873 38 H 0.257 0.743 39 H 0.136 0.864 40 H 0.097 0.903 41 H 0.169 0.831 42 H 0.159 0.841 43 H 0.138 0.862 44 H 0.142 0.858 45 H 0.146 0.854 46 H 0.131 0.869 47 H 0.145 0.855 48 H 0.141 0.859 49 H 0.094 0.906 50 H 0.132 0.868 51 H 0.193 0.807 52 H 0.175 0.825 Dipole moment (debyes) X Y Z Total from point charges -8.621 -5.970 32.644 34.287 hybrid contribution 0.036 0.568 0.355 0.671 sum -8.585 -5.402 32.999 34.523 Atomic orbital electron populations 1.22560 0.84256 1.02981 1.02376 1.59304 1.09414 1.15163 1.40485 1.22424 1.00646 0.86137 1.01944 1.19001 0.93768 0.92457 0.90211 1.19496 0.98755 0.96073 0.94211 1.24391 0.96258 1.02860 0.92571 1.86418 1.59966 1.54622 1.35410 0.94583 0.77097 0.74472 0.88025 1.21070 0.97706 0.98760 0.92895 1.19935 1.03716 0.99641 0.92586 1.18326 0.79338 0.83170 0.84447 1.90803 1.39779 1.29990 1.86185 1.45716 1.52062 1.33073 1.03941 1.22822 0.98666 0.95512 0.84459 0.89896 1.23340 1.04025 0.97550 0.91489 1.22688 0.98794 0.99260 0.92700 0.85614 1.23895 1.03792 0.86200 0.97035 1.44838 1.18845 1.15439 1.15531 0.72472 1.24132 0.98278 1.08253 0.88100 1.24271 1.01961 0.96543 0.97240 1.23874 0.99687 1.00903 0.94568 1.21472 0.93039 0.91383 1.01023 1.21978 1.01822 1.01676 0.92106 0.93578 0.89664 0.91419 0.92205 0.89725 0.93899 0.89183 0.74993 1.23068 1.21889 0.87279 0.74272 0.86413 0.90265 0.83076 0.84090 0.86162 0.85831 0.85396 0.86877 0.85538 0.85893 0.90564 0.86803 0.80748 0.82518 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.41 9.34 127.69 1.19 0.78 16 2 N -0.52 6.71 4.20 -745.11 -3.13 3.58 16 3 C 0.03 -0.49 9.38 127.69 1.20 0.70 16 4 C 0.14 -1.66 4.70 38.47 0.18 -1.48 16 5 C -0.08 0.65 5.30 -19.78 -0.10 0.55 16 6 C -0.05 0.49 2.32 71.24 0.17 0.65 16 7 O -0.56 5.35 12.86 -148.98 -1.92 3.44 16 8 Si 0.75 -7.08 30.20 68.60 2.07 -5.01 16 9 C -0.09 0.51 8.19 22.50 0.18 0.70 16 10 C -0.16 2.02 5.88 -20.08 -0.12 1.90 16 11 C 0.56 -7.78 7.76 86.69 0.67 -7.11 16 12 O -0.59 1.97 15.94 -4.01 -0.06 1.91 16 13 N -0.70 19.02 5.30 -443.20 -2.35 16.67 16 14 C 0.09 -2.95 4.24 45.52 0.19 -2.76 16 15 H 0.08 -2.01 7.46 -2.39 -0.02 -2.03 16 16 C -0.13 5.43 7.39 31.12 0.23 5.66 16 17 C -0.12 6.03 3.31 -10.27 -0.03 6.00 16 18 H 0.13 -6.73 8.09 -2.39 -0.02 -6.75 16 19 C 0.01 -0.79 4.57 86.31 0.39 -0.39 16 20 N -0.37 24.34 0.66 -948.85 -0.62 23.72 16 21 H 0.44 -30.25 8.41 -89.69 -0.75 -31.01 16 22 C -0.05 2.95 9.19 127.69 1.17 4.12 16 23 C -0.06 3.53 8.57 127.69 1.09 4.63 16 24 C -0.15 6.65 5.69 31.12 0.18 6.83 16 25 C -0.05 1.05 9.53 22.50 0.21 1.27 16 26 C -0.16 2.81 8.53 22.36 0.19 3.00 16 27 H 0.05 -0.90 7.10 -2.39 -0.02 -0.92 16 28 H 0.08 -1.51 8.12 -2.39 -0.02 -1.53 16 29 H 0.07 -1.08 8.14 -2.39 -0.02 -1.10 16 30 H 0.06 -0.62 8.14 -2.39 -0.02 -0.64 16 31 H 0.08 -1.32 8.12 -2.39 -0.02 -1.34 16 32 H 0.04 -0.74 7.32 -2.39 -0.02 -0.75 16 33 H 0.09 -1.08 7.78 -2.38 -0.02 -1.10 16 34 H 0.40 -7.55 8.74 -74.06 -0.65 -8.20 16 35 H -0.30 0.22 6.74 99.48 0.67 0.89 16 36 H -0.29 1.16 7.11 99.48 0.71 1.86 16 37 H 0.11 -0.11 4.47 -2.91 -0.01 -0.12 16 38 H 0.42 -14.50 6.75 -92.71 -0.63 -15.13 16 39 H 0.12 -5.53 8.08 -2.39 -0.02 -5.55 16 40 H 0.08 -3.12 8.14 -2.39 -0.02 -3.14 16 41 H 0.15 -9.70 8.09 -2.39 -0.02 -9.72 16 42 H 0.14 -8.91 7.79 -2.39 -0.02 -8.92 16 43 H 0.12 -7.60 8.14 -2.39 -0.02 -7.62 16 44 H 0.12 -7.80 8.14 -2.39 -0.02 -7.82 16 45 H 0.13 -8.23 8.11 -2.39 -0.02 -8.25 16 46 H 0.11 -6.53 5.13 -2.39 -0.01 -6.54 16 47 H 0.13 -7.72 8.14 -2.39 -0.02 -7.74 16 48 H 0.12 -7.49 8.11 -2.39 -0.02 -7.51 16 49 H 0.08 -3.11 7.18 -2.38 -0.02 -3.13 16 50 H 0.11 -5.34 7.89 -2.39 -0.02 -5.36 16 51 H 0.18 -5.53 6.39 -2.91 -0.02 -5.55 16 52 H 0.16 -3.60 6.99 -2.91 -0.02 -3.62 16 Total: 1.00 -88.88 401.85 -0.10 -88.98 By element: Atomic # 1 Polarization: -157.24 SS G_CDS: -1.09 Total: -158.33 kcal Atomic # 6 Polarization: 18.05 SS G_CDS: 7.00 Total: 25.05 kcal Atomic # 7 Polarization: 50.07 SS G_CDS: -6.10 Total: 43.97 kcal Atomic # 8 Polarization: 7.32 SS G_CDS: -1.98 Total: 5.34 kcal Atomic # 14 Polarization: -7.08 SS G_CDS: 2.07 Total: -5.01 kcal Total: -88.88 -0.10 -88.98 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13422196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 199.915 kcal (2) G-P(sol) polarization free energy of solvation -88.883 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 111.032 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.099 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.982 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.933 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.97 seconds