Wall clock time and date at job start Sun Mar 7 2021 06:26:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 H 1.00898 * 109.46959 * 2 1 4 4 C 1.46898 * 109.46989 * 120.00373 * 2 1 3 5 5 C 1.46899 * 109.46905 * 240.00187 * 2 1 3 6 6 C 1.53002 * 109.46944 * 65.00073 * 5 2 1 7 7 H 1.08992 * 112.85307 * 316.19283 * 6 5 2 8 8 C 1.53781 * 113.61321 * 87.50483 * 6 5 2 9 9 C 1.53785 * 87.08223 * 139.97978 * 8 6 5 10 10 H 1.08994 * 113.61703 * 89.11305 * 9 8 6 11 11 N 1.46502 * 113.68634 * 220.00842 * 9 8 6 12 12 C 1.34779 * 119.99637 * 252.53011 * 11 9 8 13 13 O 1.21656 * 119.99936 * 0.02562 * 12 11 9 14 14 C 1.47040 * 120.00089 * 180.02562 * 12 11 9 15 15 C 1.36224 * 123.49496 * 180.02562 * 14 12 11 16 16 Cl 1.73596 * 124.60341 * 359.96415 * 15 14 12 17 17 S 1.70453 * 110.79097 * 179.97438 * 15 14 12 18 18 C 1.75495 * 92.46366 * 0.02562 * 17 15 14 19 19 C 1.50701 * 124.68278 * 179.97438 * 18 17 15 20 20 O 1.42900 * 109.46851 * 245.02588 * 19 18 17 21 21 Si 1.86298 * 109.47152 * 5.02483 * 19 18 17 22 22 C 1.32692 * 110.62909 * 359.73793 * 18 17 15 23 23 C 1.53782 * 87.07789 * 334.56336 * 9 8 6 24 24 H 1.08992 * 109.47459 * 179.97438 * 1 2 3 25 25 H 1.09004 * 109.47040 * 299.99723 * 1 2 3 26 26 H 1.09000 * 109.47033 * 59.99675 * 1 2 3 27 27 H 1.09001 * 109.47062 * 59.99929 * 4 2 1 28 28 H 1.09002 * 109.46774 * 180.02562 * 4 2 1 29 29 H 1.09004 * 109.47151 * 299.99836 * 4 2 1 30 30 H 1.09000 * 109.47275 * 184.99740 * 5 2 1 31 31 H 1.08994 * 109.47490 * 305.00235 * 5 2 1 32 32 H 1.09003 * 113.61175 * 254.52216 * 8 6 5 33 33 H 1.08999 * 113.61765 * 25.42675 * 8 6 5 34 34 H 0.96995 * 120.00246 * 72.53938 * 11 9 8 35 35 H 1.09000 * 109.46843 * 125.02964 * 19 18 17 36 36 H 0.96711 * 113.99707 * 180.02562 * 20 19 18 37 37 H 1.48494 * 110.00137 * 300.00001 * 21 19 18 38 38 H 1.48508 * 109.99610 * 61.32014 * 21 19 18 39 39 H 1.08009 * 123.45034 * 180.26610 * 22 18 17 40 40 H 1.08994 * 113.61667 * 270.88071 * 23 9 8 41 41 H 1.09003 * 113.61103 * 139.98117 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6926 1.1994 5 6 1.9587 -0.6925 -1.1995 6 6 1.5539 0.0978 -2.4455 7 1 0.5238 0.4517 -2.4061 8 6 2.5664 1.1857 -2.8408 9 6 2.3145 0.7783 -4.3022 10 1 1.4927 1.3196 -4.7710 11 7 3.5264 0.7597 -5.1252 12 6 3.7276 1.7194 -6.0500 13 8 2.9032 2.6012 -6.2008 14 6 4.9436 1.7005 -6.8764 15 6 5.2191 2.6335 -7.8300 16 17 4.1922 3.9779 -8.2195 17 16 6.7088 2.3015 -8.5889 18 6 6.9770 0.8721 -7.6066 19 6 8.1836 -0.0248 -7.7091 20 8 7.7785 -1.3185 -8.1611 21 14 9.3979 0.7038 -8.9197 22 6 5.9729 0.6931 -6.7578 23 6 1.9136 -0.6057 -3.7648 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 1.5953 -1.7202 1.1993 28 1 3.0487 -0.6921 1.1996 29 1 1.5954 -0.1788 2.0894 30 1 3.0450 -0.7707 -1.1559 31 1 1.5241 -1.6909 -1.2455 32 1 2.2344 2.1971 -2.6062 33 1 3.5814 0.9823 -2.4995 34 1 4.1837 0.0568 -5.0047 35 1 8.6549 -0.1130 -6.7302 36 1 8.5058 -1.9496 -8.2501 37 1 8.7674 0.8293 -10.2582 38 1 9.8512 2.0359 -8.4448 39 1 5.9283 -0.1233 -6.0521 40 1 2.7501 -1.2988 -3.6762 41 1 1.0546 -1.0404 -4.2761 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13431040.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:25 Heat of formation + Delta-G solvation = 96.736777 kcal Electronic energy + Delta-G solvation = -23855.321987 eV Core-core repulsion = 20202.057562 eV Total energy + Delta-G solvation = -3653.264425 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.087 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.18913 -41.17385 -39.47187 -38.63508 -38.07172 -37.07223 -34.70345 -31.90850 -30.15905 -29.38728 -27.08946 -26.84743 -26.49670 -25.36905 -23.32041 -22.14192 -21.11354 -20.56009 -19.38544 -19.25311 -18.44106 -18.15329 -17.68536 -17.35860 -16.95984 -16.39943 -16.31220 -16.10172 -15.68383 -15.36499 -14.89200 -14.56343 -14.52381 -14.33638 -14.27665 -13.84871 -13.56076 -13.47841 -13.41674 -13.25396 -13.18562 -13.07010 -12.93482 -12.64892 -12.52326 -12.28930 -12.18589 -12.07966 -11.75257 -11.49986 -11.03937 -10.46324 -10.22192 -10.00492 -9.83430 -5.27352 -0.76756 -0.29732 0.35241 0.61380 0.88081 1.03378 1.15385 1.52599 1.86367 2.04158 2.10699 2.92608 2.97499 3.14405 3.17752 3.40449 3.43766 3.59889 3.74089 3.75887 3.77320 3.86178 3.90926 4.17209 4.24015 4.27825 4.36979 4.37323 4.41139 4.51468 4.65074 4.67885 4.71680 4.72692 4.81154 4.86112 4.88120 4.88895 4.96778 5.05944 5.17029 5.50804 6.37626 6.84267 7.07072 Molecular weight = 332.09amu Principal moments of inertia in cm(-1) A = 0.015217 B = 0.003028 C = 0.002633 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1839.603484 B = 9246.277887 C =10633.096124 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.046 4.046 5 C 0.013 3.987 6 C -0.119 4.119 7 H 0.125 0.875 8 C -0.151 4.151 9 C 0.095 3.905 10 H 0.085 0.915 11 N -0.696 5.696 12 C 0.574 3.426 13 O -0.560 6.560 14 C -0.163 4.163 15 C -0.135 4.135 16 Cl 0.002 6.998 17 S 0.174 5.826 18 C -0.190 4.190 19 C -0.020 4.020 20 O -0.556 6.556 21 Si 0.729 3.271 22 C -0.055 4.055 23 C -0.126 4.126 24 H 0.124 0.876 25 H 0.125 0.875 26 H 0.118 0.882 27 H 0.121 0.879 28 H 0.127 0.873 29 H 0.123 0.877 30 H 0.147 0.853 31 H 0.145 0.855 32 H 0.072 0.928 33 H 0.113 0.887 34 H 0.417 0.583 35 H 0.131 0.869 36 H 0.410 0.590 37 H -0.285 1.285 38 H -0.271 1.271 39 H 0.201 0.799 40 H 0.117 0.883 41 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.899 -14.058 30.948 34.897 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.188 4.188 5 C -0.109 4.109 6 C -0.138 4.138 7 H 0.143 0.857 8 C -0.189 4.189 9 C -0.009 4.009 10 H 0.103 0.897 11 N -0.348 5.348 12 C 0.359 3.641 13 O -0.440 6.440 14 C -0.183 4.183 15 C -0.281 4.281 16 Cl 0.031 6.969 17 S 0.439 5.561 18 C -0.307 4.307 19 C -0.134 4.134 20 O -0.367 6.367 21 Si 0.635 3.365 22 C -0.083 4.083 23 C -0.164 4.164 24 H 0.142 0.858 25 H 0.144 0.856 26 H 0.136 0.864 27 H 0.140 0.860 28 H 0.145 0.855 29 H 0.141 0.859 30 H 0.165 0.835 31 H 0.163 0.837 32 H 0.091 0.909 33 H 0.132 0.868 34 H 0.256 0.744 35 H 0.148 0.852 36 H 0.263 0.737 37 H -0.212 1.212 38 H -0.197 1.197 39 H 0.218 0.782 40 H 0.135 0.865 41 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -8.247 -11.927 29.128 32.538 hybrid contribution -1.003 0.287 0.342 1.098 sum -9.250 -11.641 29.470 33.008 Atomic orbital electron populations 1.24194 0.76469 1.09725 1.09332 1.44815 1.15797 1.19496 1.14781 0.72799 1.24140 1.05812 1.02391 0.86454 1.23897 1.06038 0.99482 0.81524 1.22770 1.01379 0.96390 0.93295 0.85744 1.23745 1.01185 0.99788 0.94191 1.22748 0.87242 1.00098 0.90846 0.89713 1.45646 1.24181 1.28293 1.36655 1.17537 0.84308 0.82288 0.79973 1.90877 1.46119 1.37591 1.69368 1.20539 0.99317 0.97717 1.00700 1.25801 1.00586 0.97629 1.04095 1.98426 1.65037 1.40911 1.92493 1.83920 1.11697 1.22930 1.37589 1.23740 1.03417 1.01231 1.02322 1.23792 0.95532 0.86739 1.07380 1.86448 1.39909 1.20671 1.89692 0.93966 0.83390 0.82164 0.77022 1.21259 0.89490 0.97801 0.99779 1.23347 1.03394 0.95068 0.94626 0.85756 0.85632 0.86399 0.85999 0.85485 0.85873 0.83476 0.83735 0.90898 0.86848 0.74433 0.85155 0.73730 1.21197 1.19659 0.78190 0.86459 0.90389 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.44 8.98 127.69 1.15 4.58 16 2 N -0.37 24.56 0.66 -948.84 -0.62 23.94 16 3 H 0.44 -29.66 8.44 -89.70 -0.76 -30.42 16 4 C -0.05 2.98 9.19 127.69 1.17 4.15 16 5 C 0.01 -0.78 4.48 86.30 0.39 -0.39 16 6 C -0.12 6.27 3.58 -10.27 -0.04 6.23 16 7 H 0.12 -6.66 6.10 -2.39 -0.01 -6.67 16 8 C -0.15 6.64 7.43 31.12 0.23 6.87 16 9 C 0.10 -3.20 4.24 45.52 0.19 -3.01 16 10 H 0.08 -2.16 7.46 -2.39 -0.02 -2.18 16 11 N -0.70 19.54 5.34 -443.65 -2.37 17.17 16 12 C 0.57 -8.91 7.79 86.55 0.67 -8.24 16 13 O -0.56 3.75 14.51 -4.21 -0.06 3.69 16 14 C -0.16 2.30 5.98 -19.84 -0.12 2.18 16 15 C -0.13 1.14 6.87 67.35 0.46 1.61 16 16 Cl 0.00 -0.01 27.20 -2.72 -0.07 -0.08 16 17 S 0.17 -1.75 20.19 -56.49 -1.14 -2.89 16 18 C -0.19 3.21 5.68 24.52 0.14 3.35 16 19 C -0.02 0.45 2.93 71.24 0.21 0.66 16 20 O -0.56 12.54 12.86 -148.98 -1.92 10.63 16 21 Si 0.73 -13.53 30.92 68.60 2.12 -11.41 16 22 C -0.06 1.14 9.75 22.70 0.22 1.36 16 23 C -0.13 5.49 7.39 31.12 0.23 5.72 16 24 H 0.12 -7.72 8.11 -2.39 -0.02 -7.74 16 25 H 0.13 -7.78 8.14 -2.38 -0.02 -7.80 16 26 H 0.12 -7.16 6.10 -2.39 -0.01 -7.17 16 27 H 0.12 -7.74 8.14 -2.39 -0.02 -7.76 16 28 H 0.13 -8.19 8.11 -2.39 -0.02 -8.20 16 29 H 0.12 -7.79 8.14 -2.38 -0.02 -7.81 16 30 H 0.15 -9.45 7.79 -2.39 -0.02 -9.47 16 31 H 0.14 -9.15 8.09 -2.39 -0.02 -9.17 16 32 H 0.07 -2.95 8.14 -2.39 -0.02 -2.97 16 33 H 0.11 -5.35 7.90 -2.39 -0.02 -5.36 16 34 H 0.42 -14.54 7.27 -92.71 -0.67 -15.22 16 35 H 0.13 -3.88 7.96 -2.39 -0.02 -3.90 16 36 H 0.41 -13.16 8.74 -74.05 -0.65 -13.81 16 37 H -0.29 2.71 7.11 99.48 0.71 3.42 16 38 H -0.27 3.47 7.11 99.48 0.71 4.17 16 39 H 0.20 -6.10 7.10 -2.91 -0.02 -6.12 16 40 H 0.12 -5.52 8.08 -2.39 -0.02 -5.54 16 41 H 0.08 -3.10 8.14 -2.39 -0.02 -3.12 16 Total: 1.00 -86.63 358.13 -0.11 -86.74 By element: Atomic # 1 Polarization: -151.89 SS G_CDS: -0.96 Total: -152.85 kcal Atomic # 6 Polarization: 20.16 SS G_CDS: 4.91 Total: 25.07 kcal Atomic # 7 Polarization: 44.10 SS G_CDS: -2.99 Total: 41.11 kcal Atomic # 8 Polarization: 16.29 SS G_CDS: -1.98 Total: 14.31 kcal Atomic # 14 Polarization: -13.53 SS G_CDS: 2.12 Total: -11.41 kcal Atomic # 16 Polarization: -1.75 SS G_CDS: -1.14 Total: -2.89 kcal Atomic # 17 Polarization: -0.01 SS G_CDS: -0.07 Total: -0.08 kcal Total: -86.63 -0.11 -86.74 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13431040.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 183.475 kcal (2) G-P(sol) polarization free energy of solvation -86.626 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 96.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.113 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.738 kcal (6) G-S(sol) free energy of system = (1) + (5) 96.737 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds