Wall clock time and date at job start Sun Mar 7 2021 06:26:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00899 * 109.46920 * 2 1 4 4 C 1.46900 * 109.47002 * 119.99497 * 2 1 3 5 5 C 1.46891 * 109.47291 * 239.99291 * 2 1 3 6 6 C 1.53005 * 109.46866 * 65.00222 * 5 2 1 7 7 H 1.09000 * 112.85133 * 43.80361 * 6 5 2 8 8 C 1.53787 * 113.61178 * 175.00030 * 6 5 2 9 9 C 1.53784 * 87.07923 * 140.06478 * 8 6 5 10 10 H 1.09002 * 113.61478 * 89.11632 * 9 8 6 11 11 N 1.46497 * 113.61569 * 220.01663 * 9 8 6 12 12 C 1.34769 * 120.00274 * 204.99925 * 11 9 8 13 13 O 1.21611 * 119.99948 * 0.02562 * 12 11 9 14 14 C 1.47384 * 120.00211 * 179.97438 * 12 11 9 15 15 C 1.36418 * 127.19089 * 0.02809 * 14 12 11 16 16 O 1.33649 * 108.39813 * 179.97438 * 15 14 12 17 17 C 1.34219 * 110.90768 * 0.02562 * 16 15 14 18 18 C 1.50703 * 125.43508 * 179.97438 * 17 16 15 19 19 O 1.42904 * 109.46746 * 119.97397 * 18 17 16 20 20 Si 1.86294 * 109.47358 * 359.97218 * 18 17 16 21 21 C 1.34175 * 109.12110 * 359.70439 * 17 16 15 22 22 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 23 23 H 1.08992 * 109.46947 * 180.02562 * 1 2 3 24 24 H 1.09001 * 109.46911 * 300.00426 * 1 2 3 25 25 H 1.08995 * 109.46861 * 60.00399 * 1 2 3 26 26 H 1.09001 * 109.47119 * 180.02562 * 4 2 1 27 27 H 1.09001 * 109.47350 * 299.99808 * 4 2 1 28 28 H 1.09002 * 109.47603 * 59.99992 * 4 2 1 29 29 H 1.08995 * 109.47633 * 305.00449 * 5 2 1 30 30 H 1.09006 * 109.47627 * 184.99903 * 5 2 1 31 31 H 1.09004 * 113.61202 * 254.61231 * 8 6 5 32 32 H 1.08994 * 113.61447 * 25.51662 * 8 6 5 33 33 H 0.97009 * 119.99534 * 24.99936 * 11 9 8 34 34 H 1.08002 * 125.79791 * 0.02562 * 15 14 12 35 35 H 1.09002 * 109.46699 * 239.96862 * 18 17 16 36 36 H 0.96696 * 113.99827 * 299.99551 * 19 18 17 37 37 H 1.48503 * 110.00070 * 179.97438 * 20 18 17 38 38 H 1.48493 * 110.00261 * 301.32275 * 20 18 17 39 39 H 1.08002 * 127.02147 * 180.27359 * 21 17 16 40 40 H 1.09006 * 113.61307 * 270.88660 * 22 9 8 41 41 H 1.08999 * 113.69146 * 139.99146 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 1.5539 0.0975 -2.4454 7 1 1.7120 1.1705 -2.3362 8 6 2.1235 -0.4792 -3.7524 9 6 0.7631 -0.1595 -4.3941 10 1 0.7049 0.8432 -4.8177 11 7 0.2908 -1.1959 -5.3155 12 6 -0.5693 -0.8784 -6.3033 13 8 -0.9531 0.2686 -6.4300 14 6 -1.0440 -1.9210 -7.2306 15 6 -0.7111 -3.2439 -7.2242 16 8 -1.3561 -3.8461 -8.2280 17 6 -2.1105 -2.9682 -8.9075 18 6 -2.9719 -3.2956 -10.1000 19 8 -4.3336 -2.9772 -9.8057 20 14 -2.8290 -5.1118 -10.4895 21 6 -1.9799 -1.7539 -8.3520 22 6 0.1606 -0.2683 -2.9835 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3633 0.5139 0.8900 25 1 -0.3633 0.5138 -0.8900 26 1 3.0486 -0.6920 1.1998 27 1 1.5953 -0.1785 2.0895 28 1 1.5953 -1.7201 1.1997 29 1 1.5241 -1.6911 -1.2452 30 1 3.0450 -0.7708 -1.1557 31 1 2.9480 0.1032 -4.1638 32 1 2.3419 -1.5457 -3.7003 33 1 0.5973 -2.1108 -5.2146 34 1 -0.0410 -3.7234 -6.5260 35 1 -2.6399 -2.7125 -10.9590 36 1 -4.6961 -3.4604 -9.0506 37 1 -3.6743 -5.4476 -11.6633 38 1 -1.4127 -5.4620 -10.7661 39 1 -2.4618 -0.8398 -8.6661 40 1 -0.1576 -1.2774 -2.7212 41 1 -0.6000 0.4835 -2.7729 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:30 Heat of formation + Delta-G solvation = 110.403902 kcal Electronic energy + Delta-G solvation = -22066.048553 eV Core-core repulsion = 18649.105893 eV Total energy + Delta-G solvation = -3416.942660 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.154 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -44.60476 -44.51907 -42.15917 -40.41670 -38.72698 -36.05038 -34.70680 -32.82861 -32.10404 -31.95911 -28.61266 -28.27316 -27.50540 -26.57224 -24.85930 -23.14002 -22.84916 -22.01565 -21.44161 -20.35258 -20.13315 -19.81335 -18.66228 -18.48798 -18.35385 -18.11400 -17.80965 -17.20536 -16.99534 -16.53763 -16.41326 -16.28940 -15.98307 -15.92264 -15.85009 -15.62432 -15.33114 -15.20455 -14.86982 -14.77639 -14.70896 -14.47067 -14.13125 -13.58943 -13.53228 -13.30988 -12.75955 -12.09630 -11.73007 -11.38749 -11.34213 -10.62132 -5.69426 -1.49521 -0.68015 0.07584 0.42993 0.47661 0.49696 0.64980 0.71616 0.90136 1.09660 1.22769 1.31886 1.33362 1.37858 1.58124 1.63115 1.74210 1.81899 1.90517 1.97544 2.10735 2.14701 2.23524 2.26761 2.31904 2.43822 2.56632 2.70177 2.84568 2.87280 2.98053 3.02566 3.12262 3.27679 3.44661 3.59153 3.65285 3.78583 3.93016 4.15126 4.42402 5.01317 5.25918 5.71925 6.10887 Molecular weight = 282.15amu Principal moments of inertia in cm(-1) A = 0.035336 B = 0.003042 C = 0.002997 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 792.199187 B = 9202.236327 C = 9341.350781 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.386 5.386 3 H 0.427 0.573 4 C -0.048 4.048 5 C 0.003 3.997 6 C -0.144 4.144 7 H 0.118 0.882 8 C -0.132 4.132 9 C 0.131 3.869 10 H 0.125 0.875 11 N -0.724 5.724 12 C 0.593 3.407 13 O -0.524 6.524 14 C -0.244 4.244 15 C 0.033 3.967 16 O -0.162 6.162 17 C -0.049 4.049 18 C -0.031 4.031 19 O -0.527 6.527 20 Si 0.705 3.295 21 C -0.125 4.125 22 C -0.161 4.161 23 H 0.121 0.879 24 H 0.124 0.876 25 H 0.127 0.873 26 H 0.123 0.877 27 H 0.125 0.875 28 H 0.121 0.879 29 H 0.130 0.870 30 H 0.133 0.867 31 H 0.093 0.907 32 H 0.098 0.902 33 H 0.401 0.599 34 H 0.212 0.788 35 H 0.136 0.864 36 H 0.384 0.616 37 H -0.245 1.245 38 H -0.253 1.253 39 H 0.164 0.836 40 H 0.097 0.903 41 H 0.087 0.913 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.054 2.359 28.970 31.097 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 N 0.039 4.961 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.119 4.119 6 C -0.163 4.163 7 H 0.136 0.864 8 C -0.171 4.171 9 C 0.025 3.975 10 H 0.143 0.857 11 N -0.376 5.376 12 C 0.382 3.618 13 O -0.400 6.400 14 C -0.249 4.249 15 C -0.038 4.038 16 O -0.058 6.058 17 C -0.098 4.098 18 C -0.141 4.141 19 O -0.332 6.332 20 Si 0.604 3.396 21 C -0.145 4.145 22 C -0.200 4.200 23 H 0.140 0.860 24 H 0.142 0.858 25 H 0.145 0.855 26 H 0.142 0.858 27 H 0.143 0.857 28 H 0.140 0.860 29 H 0.148 0.852 30 H 0.151 0.849 31 H 0.112 0.888 32 H 0.117 0.883 33 H 0.235 0.765 34 H 0.228 0.772 35 H 0.153 0.847 36 H 0.232 0.768 37 H -0.169 1.169 38 H -0.177 1.177 39 H 0.181 0.819 40 H 0.115 0.885 41 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges 10.973 2.420 27.659 29.854 hybrid contribution 0.618 0.677 0.231 0.946 sum 11.592 3.098 27.890 30.361 Atomic orbital electron populations 1.24322 0.75899 1.09694 1.09856 1.45078 1.16467 1.19008 1.15587 0.73752 1.24142 1.05654 1.02445 0.86741 1.24065 1.05112 0.99704 0.82996 1.22942 0.99596 1.01132 0.92601 0.86392 1.23373 0.98396 1.02813 0.92537 1.22315 0.92792 0.94653 0.87698 0.85747 1.45723 1.48042 1.11962 1.31837 1.17332 0.77830 0.87394 0.79242 1.90851 1.56594 1.20490 1.72034 1.21417 1.07053 0.93863 1.02563 1.24400 0.96909 0.91515 0.90931 1.83723 1.47642 1.38824 1.35600 1.22859 0.99513 0.88388 0.99013 1.24497 0.81779 1.14676 0.93177 1.86609 1.22344 1.69900 1.54390 0.94386 0.82565 0.75561 0.87040 1.22551 0.98665 0.98515 0.94775 1.23911 0.95237 1.03476 0.97365 0.86015 0.85781 0.85477 0.85820 0.85687 0.86012 0.85183 0.84875 0.88818 0.88326 0.76453 0.77193 0.84743 0.76801 1.16860 1.17687 0.81886 0.88470 0.89444 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 1.75 8.57 60.06 0.51 2.26 16 2 N -0.39 12.77 0.66 -251.27 -0.17 12.60 16 3 H 0.43 -14.81 8.40 -39.29 -0.33 -15.14 16 4 C -0.05 1.54 9.19 60.06 0.55 2.10 16 5 C 0.00 -0.09 4.57 -3.83 -0.02 -0.10 16 6 C -0.14 3.86 3.30 -89.80 -0.30 3.57 16 7 H 0.12 -3.25 8.09 -51.93 -0.42 -3.67 16 8 C -0.13 3.02 7.39 -25.91 -0.19 2.83 16 9 C 0.13 -2.46 4.24 -67.12 -0.28 -2.75 16 10 H 0.12 -1.96 7.46 -51.93 -0.39 -2.35 16 11 N -0.72 11.72 5.35 -54.11 -0.29 11.43 16 12 C 0.59 -6.16 7.81 -12.54 -0.10 -6.26 16 13 O -0.52 3.00 16.58 5.27 0.09 3.08 16 14 C -0.24 2.44 6.31 -103.28 -0.65 1.79 16 15 C 0.03 -0.42 11.61 30.08 0.35 -0.07 16 16 O -0.16 1.62 8.89 7.65 0.07 1.68 16 17 C -0.05 0.43 6.20 -35.74 -0.22 0.20 16 18 C -0.03 0.27 2.97 36.01 0.11 0.37 16 19 O -0.53 4.26 12.86 -35.23 -0.45 3.81 16 20 Si 0.71 -6.25 32.09 -169.99 -5.45 -11.70 16 21 C -0.13 0.96 10.87 -37.46 -0.41 0.56 16 22 C -0.16 3.78 5.70 -25.92 -0.15 3.63 16 23 H 0.12 -3.77 8.11 -51.93 -0.42 -4.19 16 24 H 0.12 -3.88 8.14 -51.93 -0.42 -4.30 16 25 H 0.13 -3.81 5.13 -51.93 -0.27 -4.08 16 26 H 0.12 -3.96 8.11 -51.93 -0.42 -4.38 16 27 H 0.12 -3.98 8.14 -51.93 -0.42 -4.40 16 28 H 0.12 -3.86 8.14 -51.93 -0.42 -4.28 16 29 H 0.13 -4.05 7.79 -51.93 -0.40 -4.45 16 30 H 0.13 -4.18 8.09 -51.93 -0.42 -4.60 16 31 H 0.09 -1.99 8.14 -51.93 -0.42 -2.41 16 32 H 0.10 -2.35 8.08 -51.93 -0.42 -2.76 16 33 H 0.40 -7.72 7.70 -40.82 -0.31 -8.03 16 34 H 0.21 -3.79 7.47 -52.49 -0.39 -4.18 16 35 H 0.14 -1.15 7.96 -51.93 -0.41 -1.56 16 36 H 0.38 -4.67 8.70 45.56 0.40 -4.28 16 37 H -0.24 1.33 7.11 56.52 0.40 1.73 16 38 H -0.25 1.53 7.11 56.52 0.40 1.93 16 39 H 0.16 -1.10 8.06 -52.49 -0.42 -1.53 16 40 H 0.10 -2.36 7.90 -51.93 -0.41 -2.77 16 41 H 0.09 -1.96 7.18 -51.93 -0.37 -2.34 16 LS Contribution 336.21 15.07 5.07 5.07 Total: 1.00 -39.71 336.21 -8.24 -47.95 By element: Atomic # 1 Polarization: -75.73 SS G_CDS: -6.31 Total: -82.04 kcal Atomic # 6 Polarization: 8.91 SS G_CDS: -0.79 Total: 8.12 kcal Atomic # 7 Polarization: 24.48 SS G_CDS: -0.45 Total: 24.03 kcal Atomic # 8 Polarization: 8.87 SS G_CDS: -0.30 Total: 8.57 kcal Atomic # 14 Polarization: -6.25 SS G_CDS: -5.45 Total: -11.70 kcal Total LS contribution 5.07 Total: 5.07 kcal Total: -39.71 -8.24 -47.95 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 158.357 kcal (2) G-P(sol) polarization free energy of solvation -39.711 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 118.647 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.953 kcal (6) G-S(sol) free energy of system = (1) + (5) 110.404 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds