Wall clock time and date at job start Sun Mar 7 2021 06:26:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.37868 * 126.45649 * 2 1 4 4 C 1.46684 * 126.23373 * 359.97438 * 3 2 1 5 5 O 1.21698 * 119.99898 * 0.02562 * 4 3 2 6 6 N 1.34770 * 120.00290 * 180.02562 * 4 3 2 7 7 C 1.46497 * 120.00292 * 180.02562 * 6 4 3 8 8 H 1.09004 * 112.84483 * 334.65878 * 7 6 4 9 9 C 1.53778 * 113.61992 * 105.85829 * 7 6 4 10 10 C 1.53951 * 87.02021 * 139.95380 * 9 7 6 11 11 H 1.08995 * 113.54132 * 89.18965 * 10 9 7 12 12 C 1.53006 * 113.74268 * 220.06001 * 10 9 7 13 13 N 1.46903 * 109.46592 * 272.59635 * 12 10 9 14 14 H 1.00904 * 109.47505 * 304.99233 * 13 12 10 15 15 C 1.46895 * 109.47410 * 65.00210 * 13 12 10 16 16 C 1.46907 * 109.46729 * 185.00250 * 13 12 10 17 17 C 1.53780 * 113.61495 * 203.47204 * 7 6 4 18 18 N 1.37650 * 107.53773 * 180.02562 * 3 2 1 19 19 C 1.35534 * 108.64134 * 359.97438 * 18 3 2 20 20 C 1.50702 * 125.56412 * 180.02562 * 19 18 3 21 21 O 1.42892 * 109.47242 * 64.99718 * 20 19 18 22 22 Si 1.86298 * 109.46915 * 185.00257 * 20 19 18 23 23 C 1.35453 * 108.87247 * 0.26381 * 19 18 3 24 24 H 1.08996 * 109.47014 * 90.00666 * 1 2 3 25 25 H 1.09001 * 109.47022 * 210.00108 * 1 2 3 26 26 H 1.08994 * 109.47576 * 330.00048 * 1 2 3 27 27 H 0.96998 * 119.99957 * 359.97438 * 6 4 3 28 28 H 1.09000 * 113.61681 * 254.52915 * 9 7 6 29 29 H 1.09000 * 113.61015 * 25.43502 * 9 7 6 30 30 H 1.08990 * 109.46951 * 32.59637 * 12 10 9 31 31 H 1.08999 * 109.47290 * 152.59799 * 12 10 9 32 32 H 1.09000 * 109.47481 * 179.97438 * 15 13 12 33 33 H 1.09005 * 109.47081 * 299.99620 * 15 13 12 34 34 H 1.09001 * 109.47304 * 59.99377 * 15 13 12 35 35 H 1.08992 * 109.47261 * 59.99431 * 16 13 12 36 36 H 1.09000 * 109.47226 * 180.02562 * 16 13 12 37 37 H 1.09001 * 109.46687 * 299.99828 * 16 13 12 38 38 H 1.08999 * 113.61286 * 334.55985 * 17 7 6 39 39 H 1.09002 * 113.62023 * 105.38175 * 17 7 6 40 40 H 0.96996 * 125.67900 * 180.02562 * 18 3 2 41 41 H 1.09000 * 109.46724 * 304.99764 * 20 19 18 42 42 H 0.96703 * 114.00176 * 180.02562 * 21 20 19 43 43 H 1.48506 * 109.99834 * 178.68053 * 22 20 19 44 44 H 1.48502 * 110.00011 * 299.99318 * 22 20 19 45 45 H 1.07993 * 126.07103 * 179.73311 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8898 2.5093 -0.0005 5 8 0.7025 2.7766 -0.0006 6 7 2.8035 3.4999 -0.0010 7 6 2.3677 4.8986 -0.0009 8 1 1.3748 5.0324 -0.4305 9 6 2.5524 5.6015 1.3542 10 6 3.0071 6.8391 0.5595 11 1 2.1889 7.5045 0.2842 12 6 4.1870 7.5790 1.1933 13 7 3.6848 8.5605 2.1640 14 1 3.0224 9.1726 1.7116 15 6 3.0250 7.8590 3.2732 16 6 4.8072 9.3529 2.6843 17 6 3.4180 5.8712 -0.5627 18 7 3.6284 0.6626 -0.0006 19 6 3.6218 -0.6927 -0.0004 20 6 4.8435 -1.5752 -0.0003 21 8 5.5631 -1.3923 1.2206 22 14 4.3222 -3.3572 -0.1531 23 6 2.3380 -1.1247 -0.0056 24 1 -0.3633 -0.0001 -1.0276 25 1 -0.3633 -0.8900 0.5139 26 1 -0.3634 0.8899 0.5138 27 1 3.7498 3.2869 -0.0006 28 1 1.6205 5.7500 1.8998 29 1 3.3391 5.1642 1.9691 30 1 4.8337 6.8637 1.7012 31 1 4.7531 8.0930 0.4165 32 1 2.6528 8.5873 3.9937 33 1 2.1922 7.2711 2.8871 34 1 3.7406 7.1978 3.7620 35 1 5.2968 9.8734 1.8613 36 1 4.4348 10.0809 3.4049 37 1 5.5228 8.6917 3.1731 38 1 4.4417 5.5078 -0.4728 39 1 3.1847 6.2360 -1.5630 40 1 4.4190 1.2245 -0.0004 41 1 5.4830 -1.3102 -0.8422 42 1 6.3637 -1.9303 1.2897 43 1 5.5193 -4.2354 -0.1863 44 1 3.4497 -3.7309 0.9889 45 1 2.0137 -2.1547 -0.0108 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_13940406.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:33 Heat of formation + Delta-G solvation = 103.408585 kcal Electronic energy + Delta-G solvation = -24157.117734 eV Core-core repulsion = 20682.052778 eV Total energy + Delta-G solvation = -3475.064957 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.66695 -42.19573 -40.57301 -38.97737 -37.86226 -34.99601 -33.52740 -31.86272 -30.14210 -29.52630 -28.28821 -27.15219 -26.72491 -25.68916 -23.96651 -22.28788 -21.64295 -21.25788 -20.28317 -19.41305 -19.09672 -18.66720 -18.06877 -17.47210 -16.96633 -16.75096 -16.46672 -16.05874 -15.98166 -15.29794 -15.03096 -14.93894 -14.43778 -14.30360 -14.02502 -13.94046 -13.67470 -13.60806 -13.55541 -13.43848 -13.36195 -13.31778 -13.15856 -13.10685 -12.86738 -12.54325 -12.34026 -12.06393 -11.82694 -11.53283 -11.14827 -10.67696 -10.22839 -9.87896 -9.23224 -4.89442 0.23391 1.01071 1.15861 1.44939 1.60120 1.89840 1.99364 2.15126 2.19468 2.86613 2.94206 3.18078 3.20268 3.31177 3.43883 3.67737 3.70900 3.75063 3.81459 3.95305 4.07563 4.10641 4.12991 4.18541 4.31016 4.36438 4.38104 4.45082 4.64215 4.65243 4.66913 4.71358 4.74241 4.77079 4.81712 4.85043 4.86073 4.91480 5.03095 5.08705 5.12585 5.28428 5.44836 5.59460 5.77471 6.26050 6.42850 6.48574 7.03513 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.020983 B = 0.003339 C = 0.003042 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1334.095884 B = 8383.466340 C = 9202.572396 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 C -0.091 4.091 3 C -0.068 4.068 4 C 0.591 3.409 5 O -0.561 6.561 6 N -0.708 5.708 7 C 0.096 3.904 8 H 0.090 0.910 9 C -0.154 4.154 10 C -0.115 4.115 11 H 0.129 0.871 12 C 0.012 3.988 13 N -0.369 5.369 14 H 0.439 0.561 15 C -0.057 4.057 16 C -0.046 4.046 17 C -0.126 4.126 18 N -0.509 5.509 19 C 0.076 3.924 20 C -0.054 4.054 21 O -0.559 6.559 22 Si 0.769 3.231 23 C -0.216 4.216 24 H 0.070 0.930 25 H 0.070 0.930 26 H 0.065 0.935 27 H 0.409 0.591 28 H 0.078 0.922 29 H 0.106 0.894 30 H 0.137 0.863 31 H 0.151 0.849 32 H 0.127 0.873 33 H 0.114 0.886 34 H 0.120 0.880 35 H 0.128 0.872 36 H 0.124 0.876 37 H 0.118 0.882 38 H 0.112 0.888 39 H 0.081 0.919 40 H 0.430 0.570 41 H 0.111 0.889 42 H 0.402 0.598 43 H -0.283 1.283 44 H -0.303 1.303 45 H 0.154 0.846 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.774 28.625 4.973 30.653 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.147 4.147 2 C -0.100 4.100 3 C -0.181 4.181 4 C 0.379 3.621 5 O -0.440 6.440 6 N -0.359 5.359 7 C -0.008 4.008 8 H 0.108 0.892 9 C -0.192 4.192 10 C -0.134 4.134 11 H 0.147 0.853 12 C -0.110 4.110 13 N 0.054 4.946 14 H 0.276 0.724 15 C -0.200 4.200 16 C -0.188 4.188 17 C -0.165 4.165 18 N -0.107 5.107 19 C -0.043 4.043 20 C -0.163 4.163 21 O -0.369 6.369 22 Si 0.674 3.326 23 C -0.240 4.240 24 H 0.088 0.912 25 H 0.089 0.911 26 H 0.084 0.916 27 H 0.246 0.754 28 H 0.097 0.903 29 H 0.125 0.875 30 H 0.155 0.845 31 H 0.169 0.831 32 H 0.145 0.855 33 H 0.133 0.867 34 H 0.138 0.862 35 H 0.146 0.854 36 H 0.142 0.858 37 H 0.137 0.863 38 H 0.130 0.870 39 H 0.100 0.900 40 H 0.270 0.730 41 H 0.128 0.872 42 H 0.253 0.747 43 H -0.210 1.210 44 H -0.230 1.230 45 H 0.171 0.829 Dipole moment (debyes) X Y Z Total from point charges 8.785 28.455 5.566 30.296 hybrid contribution 1.151 -0.179 0.530 1.279 sum 9.935 28.276 6.096 30.584 Atomic orbital electron populations 1.20323 0.89286 1.02665 1.02442 1.20149 0.96295 0.91485 1.02025 1.20205 0.84071 0.93668 1.20144 1.17069 0.85797 0.83513 0.75682 1.90836 1.17745 1.83643 1.51753 1.45722 1.09225 1.05960 1.75012 1.22769 1.00122 0.78425 0.99463 0.89191 1.23889 1.03347 0.95640 0.96351 1.22729 0.98538 0.95647 0.96505 0.85336 1.23884 0.98232 0.94238 0.94612 1.44830 1.17575 1.16488 1.15695 0.72380 1.24268 1.02591 1.02401 0.90733 1.24129 0.89987 0.99121 1.05551 1.23323 0.99677 0.94173 0.99339 1.41663 1.06916 1.06222 1.55894 1.19987 0.95155 0.83180 1.05973 1.24478 0.92878 1.08922 0.90062 1.86500 1.43245 1.68796 1.38405 0.93493 0.80081 0.71377 0.87650 1.20799 0.91422 0.99556 1.12210 0.91162 0.91145 0.91607 0.75421 0.90338 0.87534 0.84484 0.83098 0.85487 0.86709 0.86151 0.85355 0.85782 0.86336 0.86985 0.90011 0.72955 0.87163 0.74659 1.20965 1.23023 0.82876 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.87 9.83 71.24 0.70 1.57 16 2 C -0.09 0.92 6.21 -19.56 -0.12 0.80 16 3 C -0.07 0.99 7.06 40.35 0.28 1.27 16 4 C 0.59 -9.79 7.79 86.45 0.67 -9.12 16 5 O -0.56 4.71 14.42 -4.34 -0.06 4.65 16 6 N -0.71 20.23 5.36 -444.00 -2.38 17.85 16 7 C 0.10 -3.31 4.21 45.52 0.19 -3.12 16 8 H 0.09 -2.43 7.50 -2.39 -0.02 -2.45 16 9 C -0.15 6.80 5.70 31.18 0.18 6.98 16 10 C -0.12 6.08 3.30 -10.21 -0.03 6.05 16 11 H 0.13 -7.00 8.09 -2.39 -0.02 -7.02 16 12 C 0.01 -0.76 4.57 86.30 0.39 -0.37 16 13 N -0.37 24.30 0.66 -948.83 -0.62 23.67 16 14 H 0.44 -30.44 8.41 -89.69 -0.75 -31.19 16 15 C -0.06 3.51 8.57 127.69 1.09 4.61 16 16 C -0.05 2.95 9.19 127.69 1.17 4.13 16 17 C -0.13 5.58 7.39 31.12 0.23 5.81 16 18 N -0.51 10.10 5.99 -171.93 -1.03 9.07 16 19 C 0.08 -1.21 6.50 41.34 0.27 -0.94 16 20 C -0.05 1.05 3.07 71.24 0.22 1.27 16 21 O -0.56 10.03 12.86 -148.98 -1.92 8.11 16 22 Si 0.77 -12.92 30.56 68.60 2.10 -10.83 16 23 C -0.22 2.60 9.27 22.01 0.20 2.80 16 24 H 0.07 -0.70 8.14 -2.39 -0.02 -0.72 16 25 H 0.07 -0.78 8.14 -2.39 -0.02 -0.80 16 26 H 0.07 -0.45 6.48 -2.39 -0.02 -0.47 16 27 H 0.41 -14.14 7.84 -92.71 -0.73 -14.87 16 28 H 0.08 -3.26 7.19 -2.39 -0.02 -3.28 16 29 H 0.11 -4.91 7.91 -2.39 -0.02 -4.93 16 30 H 0.14 -8.56 7.80 -2.39 -0.02 -8.58 16 31 H 0.15 -9.68 8.09 -2.39 -0.02 -9.70 16 32 H 0.13 -7.75 8.14 -2.39 -0.02 -7.77 16 33 H 0.11 -6.65 5.13 -2.38 -0.01 -6.66 16 34 H 0.12 -7.26 8.11 -2.39 -0.02 -7.28 16 35 H 0.13 -8.24 8.11 -2.39 -0.02 -8.26 16 36 H 0.12 -7.82 8.14 -2.39 -0.02 -7.84 16 37 H 0.12 -7.44 8.14 -2.39 -0.02 -7.46 16 38 H 0.11 -5.25 8.07 -2.39 -0.02 -5.27 16 39 H 0.08 -3.33 8.14 -2.39 -0.02 -3.35 16 40 H 0.43 -11.83 8.19 -92.71 -0.76 -12.59 16 41 H 0.11 -2.80 7.96 -2.39 -0.02 -2.82 16 42 H 0.40 -10.08 8.74 -74.06 -0.65 -10.72 16 43 H -0.28 3.53 7.11 99.48 0.71 4.24 16 44 H -0.30 2.36 7.11 99.48 0.71 3.07 16 45 H 0.15 -2.10 6.19 -2.91 -0.02 -2.11 16 Total: 1.00 -84.27 355.40 -0.28 -84.55 By element: Atomic # 1 Polarization: -156.99 SS G_CDS: -1.82 Total: -158.81 kcal Atomic # 6 Polarization: 16.27 SS G_CDS: 5.46 Total: 21.73 kcal Atomic # 7 Polarization: 54.63 SS G_CDS: -4.03 Total: 50.60 kcal Atomic # 8 Polarization: 14.74 SS G_CDS: -1.98 Total: 12.76 kcal Atomic # 14 Polarization: -12.92 SS G_CDS: 2.10 Total: -10.83 kcal Total: -84.27 -0.28 -84.55 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_13940406.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 187.960 kcal (2) G-P(sol) polarization free energy of solvation -84.270 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.690 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.282 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.552 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.409 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds