Wall clock time and date at job start Sun Mar 7 2021 06:26:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00907 * 109.47214 * 2 1 4 4 C 1.46903 * 109.47165 * 119.99402 * 2 1 3 5 5 C 1.46900 * 109.47668 * 239.99714 * 2 1 3 6 6 C 1.53000 * 109.46802 * 64.99560 * 5 2 1 7 7 H 1.09000 * 112.90915 * 43.75552 * 6 5 2 8 8 C 1.53787 * 113.60890 * 175.00447 * 6 5 2 9 9 C 1.53784 * 87.07923 * 139.98364 * 8 6 5 10 10 H 1.09002 * 113.61478 * 89.11632 * 9 8 6 11 11 N 1.46497 * 113.61569 * 220.01663 * 9 8 6 12 12 C 1.34769 * 120.00274 * 204.99925 * 11 9 8 13 13 O 1.21283 * 120.00052 * 0.02562 * 12 11 9 14 14 C 1.50706 * 119.99945 * 179.97438 * 12 11 9 15 15 C 1.50703 * 109.46838 * 179.97438 * 14 12 11 16 16 C 1.34843 * 125.88990 * 85.02861 * 15 14 12 17 17 C 1.40890 * 107.42181 * 179.97438 * 16 15 14 18 18 C 1.34859 * 107.41201 * 0.02562 * 17 16 15 19 19 C 1.50700 * 125.88762 * 179.97438 * 18 17 16 20 20 O 1.42896 * 109.47268 * 245.02297 * 19 18 17 21 21 Si 1.86296 * 109.47315 * 5.02401 * 19 18 17 22 22 N 1.36339 * 108.21826 * 359.73706 * 18 17 16 23 23 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 24 24 H 1.08999 * 109.47045 * 60.00452 * 1 2 3 25 25 H 1.08994 * 109.46903 * 180.02562 * 1 2 3 26 26 H 1.09000 * 109.47362 * 300.00532 * 1 2 3 27 27 H 1.09000 * 109.47198 * 180.02562 * 4 2 1 28 28 H 1.09000 * 109.47034 * 300.00267 * 4 2 1 29 29 H 1.08992 * 109.47164 * 59.99919 * 4 2 1 30 30 H 1.09003 * 109.46426 * 304.99961 * 5 2 1 31 31 H 1.08993 * 109.47679 * 185.00053 * 5 2 1 32 32 H 1.09004 * 113.61202 * 254.53117 * 8 6 5 33 33 H 1.08994 * 113.61447 * 25.43549 * 8 6 5 34 34 H 0.97009 * 119.99534 * 24.99936 * 11 9 8 35 35 H 1.08991 * 109.47537 * 300.00273 * 14 12 11 36 36 H 1.09001 * 109.47014 * 60.00675 * 14 12 11 37 37 H 1.08003 * 126.29379 * 0.02562 * 16 15 14 38 38 H 1.08000 * 126.29536 * 180.02562 * 17 16 15 39 39 H 1.08999 * 109.47082 * 125.02346 * 19 18 17 40 40 H 0.96693 * 114.00545 * 180.02562 * 20 19 18 41 41 H 1.48502 * 109.99916 * 300.00014 * 21 19 18 42 42 H 1.48504 * 110.00389 * 61.31842 * 21 19 18 43 43 H 0.96995 * 125.63687 * 180.26672 * 22 18 17 44 44 H 1.09006 * 113.61307 * 270.88660 * 23 9 8 45 45 H 1.09007 * 113.61642 * 139.98417 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6924 1.1995 5 6 1.9588 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 1.7107 1.1708 -2.3369 8 6 2.1236 -0.4791 -3.7524 9 6 0.7624 -0.1615 -4.3936 10 1 0.7027 0.8409 -4.8176 11 7 0.2909 -1.1990 -5.3142 12 6 -0.5702 -0.8831 -6.3016 13 8 -0.9545 0.2602 -6.4284 14 6 -1.0546 -1.9504 -7.2490 15 6 -2.0011 -1.3408 -8.2507 16 6 -1.6494 -0.7273 -9.3989 17 6 -2.8353 -0.3072 -10.0331 18 6 -3.8666 -0.6796 -9.2479 19 6 -5.3263 -0.4358 -9.5323 20 8 -5.8625 0.4484 -8.5461 21 14 -5.5106 0.3313 -11.2199 22 7 -3.3611 -1.3193 -8.1552 23 6 0.1608 -0.2703 -2.9825 24 1 -0.3633 0.5138 -0.8900 25 1 -0.3633 -1.0276 0.0005 26 1 -0.3634 0.5139 0.8899 27 1 3.0487 -0.6920 1.1998 28 1 1.5953 -0.1785 2.0895 29 1 1.5954 -1.7200 1.1997 30 1 1.5242 -1.6911 -1.2451 31 1 3.0450 -0.7707 -1.1557 32 1 2.9471 0.1041 -4.1645 33 1 2.3433 -1.5454 -3.6999 34 1 0.5986 -2.1134 -5.2129 35 1 -0.2032 -2.3862 -7.7715 36 1 -1.5724 -2.7275 -6.6867 37 1 -0.6436 -0.5849 -9.7655 38 1 -2.9056 0.2167 -10.9749 39 1 -5.8653 -1.3827 -9.5028 40 1 -6.8005 0.6498 -8.6667 41 1 -4.7802 1.6232 -11.2732 42 1 -4.9856 -0.5921 -12.2578 43 1 -3.8825 -1.6950 -7.4288 44 1 -0.1560 -1.2796 -2.7196 45 1 -0.6004 0.4814 -2.7732 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:37 Heat of formation + Delta-G solvation = 103.308816 kcal Electronic energy + Delta-G solvation = -23755.693521 eV Core-core repulsion = 20280.624238 eV Total energy + Delta-G solvation = -3475.069283 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.51664 -42.22270 -40.76862 -39.04972 -37.71077 -34.74575 -33.22546 -32.15904 -30.37054 -29.55147 -29.30236 -26.72748 -25.99038 -25.19863 -23.71012 -21.93841 -21.56718 -21.34196 -20.86207 -19.11096 -18.50791 -18.36248 -18.17636 -17.92488 -17.40798 -16.69014 -16.39512 -16.05244 -15.83718 -15.27989 -15.17009 -14.99188 -14.70648 -14.49831 -14.18602 -13.94056 -13.62141 -13.59814 -13.50868 -13.48527 -13.41800 -13.31259 -13.13337 -12.98416 -12.81367 -12.58442 -12.32988 -12.10914 -11.80623 -11.52204 -11.04207 -10.48573 -10.08479 -10.02231 -9.13860 -5.02289 0.89887 1.01913 1.21094 1.52104 1.61310 1.68261 1.99775 2.17913 2.36904 2.88064 2.95331 3.19450 3.32997 3.41179 3.44829 3.54946 3.70459 3.73964 3.87099 3.91906 4.01035 4.09778 4.14211 4.19192 4.19442 4.26074 4.31912 4.38825 4.45954 4.51112 4.60066 4.65982 4.68920 4.73436 4.75183 4.82683 4.86948 4.91855 5.00210 5.03767 5.07560 5.18780 5.52943 5.76823 5.89116 6.44757 6.55546 6.79940 7.21131 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.030216 B = 0.002716 C = 0.002579 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 926.436020 B =10308.077737 C =10855.293097 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.371 5.371 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.013 3.987 6 C -0.118 4.118 7 H 0.122 0.878 8 C -0.126 4.126 9 C 0.094 3.906 10 H 0.077 0.923 11 N -0.706 5.706 12 C 0.511 3.489 13 O -0.581 6.581 14 C -0.068 4.068 15 C 0.042 3.958 16 C -0.206 4.206 17 C -0.230 4.230 18 C 0.020 3.980 19 C -0.053 4.053 20 O -0.568 6.568 21 Si 0.804 3.196 22 N -0.528 5.528 23 C -0.151 4.151 24 H 0.112 0.888 25 H 0.123 0.877 26 H 0.126 0.874 27 H 0.127 0.873 28 H 0.123 0.877 29 H 0.120 0.880 30 H 0.142 0.858 31 H 0.150 0.850 32 H 0.074 0.926 33 H 0.117 0.883 34 H 0.421 0.579 35 H 0.142 0.858 36 H 0.137 0.863 37 H 0.139 0.861 38 H 0.120 0.880 39 H 0.099 0.901 40 H 0.406 0.594 41 H -0.308 1.308 42 H -0.292 1.292 43 H 0.425 0.575 44 H 0.114 0.886 45 H 0.072 0.928 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 12.408 -5.354 31.644 34.409 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.188 4.188 5 C -0.109 4.109 6 C -0.137 4.137 7 H 0.140 0.860 8 C -0.165 4.165 9 C -0.011 4.011 10 H 0.095 0.905 11 N -0.359 5.359 12 C 0.298 3.702 13 O -0.460 6.460 14 C -0.108 4.108 15 C -0.072 4.072 16 C -0.231 4.231 17 C -0.255 4.255 18 C -0.094 4.094 19 C -0.163 4.163 20 O -0.379 6.379 21 Si 0.710 3.290 22 N -0.124 5.124 23 C -0.189 4.189 24 H 0.131 0.869 25 H 0.142 0.858 26 H 0.144 0.856 27 H 0.145 0.855 28 H 0.142 0.858 29 H 0.139 0.861 30 H 0.160 0.840 31 H 0.167 0.833 32 H 0.093 0.907 33 H 0.135 0.865 34 H 0.259 0.741 35 H 0.160 0.840 36 H 0.155 0.845 37 H 0.157 0.843 38 H 0.138 0.862 39 H 0.117 0.883 40 H 0.258 0.742 41 H -0.236 1.236 42 H -0.220 1.220 43 H 0.264 0.736 44 H 0.132 0.868 45 H 0.091 0.909 Dipole moment (debyes) X Y Z Total from point charges 12.950 -4.629 31.205 34.101 hybrid contribution 0.298 0.000 -0.161 0.339 sum 13.248 -4.629 31.044 34.069 Atomic orbital electron populations 1.24265 0.76807 1.09641 1.09228 1.44848 1.15522 1.19580 1.14760 0.72535 1.24130 1.05802 1.02357 0.86468 1.23892 1.06127 0.99292 0.81571 1.22693 0.95972 1.01919 0.93106 0.85999 1.23326 0.95349 1.03870 0.93942 1.22641 0.96925 0.92366 0.89213 0.90517 1.45805 1.46093 1.13401 1.30576 1.20901 0.78668 0.89249 0.81422 1.90796 1.58370 1.23618 1.73178 1.20307 0.99302 0.96810 0.94406 1.19999 0.83082 1.05940 0.98207 1.20790 0.98329 1.06524 0.97412 1.20743 0.93713 1.09103 1.01956 1.20047 0.94413 1.03876 0.91086 1.24434 0.89048 0.98602 1.04223 1.86438 1.32109 1.67166 1.52138 0.94428 0.87458 0.75653 0.71445 1.41799 1.06256 1.45130 1.19224 1.23845 0.96826 1.04071 0.94152 0.86915 0.85816 0.85582 0.85454 0.85840 0.86116 0.84034 0.83252 0.90675 0.86464 0.74128 0.84019 0.84503 0.84280 0.86233 0.88306 0.74192 1.23625 1.21989 0.73642 0.86767 0.90938 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.50 8.57 127.69 1.09 4.60 16 2 N -0.37 24.39 0.66 -948.87 -0.62 23.76 16 3 H 0.44 -30.14 8.41 -89.69 -0.75 -30.90 16 4 C -0.05 2.95 9.19 127.69 1.17 4.12 16 5 C 0.01 -0.81 4.57 86.30 0.39 -0.42 16 6 C -0.12 6.17 3.31 -10.27 -0.03 6.13 16 7 H 0.12 -6.46 8.10 -2.39 -0.02 -6.48 16 8 C -0.13 5.51 7.39 31.12 0.23 5.74 16 9 C 0.09 -3.20 4.24 45.52 0.19 -3.01 16 10 H 0.08 -1.90 7.47 -2.39 -0.02 -1.91 16 11 N -0.71 21.93 5.35 -440.04 -2.36 19.57 16 12 C 0.51 -10.16 7.82 87.66 0.69 -9.47 16 13 O -0.58 4.08 15.64 -3.04 -0.05 4.03 16 14 C -0.07 1.55 6.24 29.10 0.18 1.73 16 15 C 0.04 -0.47 5.66 41.08 0.23 -0.23 16 16 C -0.21 0.99 10.76 22.14 0.24 1.23 16 17 C -0.23 0.32 9.37 22.14 0.21 0.53 16 18 C 0.02 -0.11 6.53 41.08 0.27 0.16 16 19 C -0.05 0.61 3.07 71.24 0.22 0.83 16 20 O -0.57 6.57 12.85 -148.98 -1.92 4.65 16 21 Si 0.80 -8.77 30.60 68.60 2.10 -6.67 16 22 N -0.53 5.53 6.07 -171.12 -1.04 4.49 16 23 C -0.15 6.71 5.69 31.12 0.18 6.89 16 24 H 0.11 -6.53 5.13 -2.39 -0.01 -6.54 16 25 H 0.12 -7.59 8.11 -2.39 -0.02 -7.61 16 26 H 0.13 -7.72 8.14 -2.39 -0.02 -7.74 16 27 H 0.13 -8.18 8.11 -2.39 -0.02 -8.20 16 28 H 0.12 -7.80 8.14 -2.39 -0.02 -7.82 16 29 H 0.12 -7.65 8.14 -2.39 -0.02 -7.67 16 30 H 0.14 -8.97 7.79 -2.39 -0.02 -8.98 16 31 H 0.15 -9.55 8.09 -2.39 -0.02 -9.57 16 32 H 0.07 -2.95 8.14 -2.39 -0.02 -2.97 16 33 H 0.12 -5.54 8.08 -2.39 -0.02 -5.56 16 34 H 0.42 -16.15 8.73 -92.70 -0.81 -16.96 16 35 H 0.14 -3.87 8.14 -2.39 -0.02 -3.88 16 36 H 0.14 -4.12 8.14 -2.39 -0.02 -4.13 16 37 H 0.14 -0.98 8.06 -2.91 -0.02 -1.01 16 38 H 0.12 -0.03 6.24 -2.91 -0.02 -0.04 16 39 H 0.10 -1.68 7.96 -2.39 -0.02 -1.70 16 40 H 0.41 -9.07 8.74 -74.06 -0.65 -9.72 16 41 H -0.31 0.45 7.11 99.48 0.71 1.15 16 42 H -0.29 1.38 7.11 99.48 0.71 2.09 16 43 H 0.42 -6.98 8.96 -92.71 -0.83 -7.81 16 44 H 0.11 -5.49 7.90 -2.38 -0.02 -5.50 16 45 H 0.07 -2.98 7.18 -2.38 -0.02 -3.00 16 Total: 1.00 -93.20 359.71 -0.61 -93.80 By element: Atomic # 1 Polarization: -160.48 SS G_CDS: -1.99 Total: -162.47 kcal Atomic # 6 Polarization: 13.57 SS G_CDS: 5.26 Total: 18.83 kcal Atomic # 7 Polarization: 51.85 SS G_CDS: -4.02 Total: 47.83 kcal Atomic # 8 Polarization: 10.64 SS G_CDS: -1.96 Total: 8.68 kcal Atomic # 14 Polarization: -8.77 SS G_CDS: 2.10 Total: -6.67 kcal Total: -93.20 -0.61 -93.80 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 197.114 kcal (2) G-P(sol) polarization free energy of solvation -93.197 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 103.916 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.608 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.805 kcal (6) G-S(sol) free energy of system = (1) + (5) 103.309 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds