Wall clock time and date at job start Sun Mar 7 2021 06:26:41 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00904 * 109.46778 * 2 1 4 4 C 1.46899 * 109.47202 * 119.99753 * 2 1 3 5 5 C 1.46899 * 109.47026 * 240.00316 * 2 1 3 6 6 C 1.53001 * 109.47152 * 64.99924 * 5 2 1 7 7 H 1.08991 * 112.85027 * 43.80580 * 6 5 2 8 8 C 1.53783 * 113.61238 * 175.00190 * 6 5 2 9 9 C 1.53785 * 87.08098 * 140.06441 * 8 6 5 10 10 H 1.08997 * 113.61341 * 89.19881 * 9 8 6 11 11 N 1.46503 * 113.61231 * 220.02104 * 9 8 6 12 12 C 1.34776 * 119.99609 * 205.00086 * 11 9 8 13 13 O 1.21283 * 119.99938 * 359.97438 * 12 11 9 14 14 C 1.50702 * 119.99921 * 179.97438 * 12 11 9 15 15 C 1.53547 * 109.82314 * 280.00012 * 14 12 11 16 16 C 1.53032 * 108.56307 * 179.44846 * 15 14 12 17 17 C 1.50208 * 110.18023 * 49.65448 * 16 15 14 18 18 C 1.50700 * 118.54754 * 159.83774 * 17 16 15 19 19 O 1.42893 * 109.46748 * 70.00295 * 18 17 16 20 20 Si 1.86293 * 109.47104 * 190.00393 * 18 17 16 21 21 C 1.30892 * 123.07204 * 339.67396 * 17 16 15 22 22 N 1.38922 * 121.78156 * 0.72882 * 21 17 16 23 23 C 1.53782 * 87.07888 * 334.56431 * 9 8 6 24 24 H 1.09002 * 109.47210 * 59.99707 * 1 2 3 25 25 H 1.08999 * 109.47087 * 180.02562 * 1 2 3 26 26 H 1.09003 * 109.46960 * 300.00039 * 1 2 3 27 27 H 1.08999 * 109.47209 * 179.97438 * 4 2 1 28 28 H 1.08996 * 109.47526 * 300.00643 * 4 2 1 29 29 H 1.09004 * 109.46509 * 59.99962 * 4 2 1 30 30 H 1.08997 * 109.47043 * 304.99961 * 5 2 1 31 31 H 1.09001 * 109.46898 * 184.99953 * 5 2 1 32 32 H 1.09001 * 113.61269 * 25.51568 * 8 6 5 33 33 H 1.08998 * 113.68732 * 254.62230 * 8 6 5 34 34 H 0.96994 * 120.00240 * 24.99443 * 11 9 8 35 35 H 1.08995 * 109.81265 * 40.86343 * 14 12 11 36 36 H 1.09003 * 109.62130 * 59.72361 * 15 14 12 37 37 H 1.09005 * 109.61941 * 299.17342 * 15 14 12 38 38 H 1.09002 * 109.32995 * 169.83147 * 16 15 14 39 39 H 1.08996 * 109.33232 * 289.48414 * 16 15 14 40 40 H 1.09000 * 109.47086 * 310.00645 * 18 17 16 41 41 H 0.96701 * 114.00225 * 180.02562 * 19 18 17 42 42 H 1.48500 * 110.00315 * 178.68218 * 20 18 17 43 43 H 1.48503 * 110.00127 * 300.00338 * 20 18 17 44 44 H 1.07995 * 119.14217 * 180.56334 * 21 17 16 45 45 H 0.97004 * 120.55916 * 166.54331 * 22 21 17 46 46 H 1.09006 * 113.61239 * 139.98316 * 23 9 8 47 47 H 1.08997 * 113.61675 * 270.88103 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9514 0.0000 4 6 1.9587 -0.6924 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 1.5539 0.0978 -2.4455 7 1 1.7119 1.1706 -2.3361 8 6 2.1234 -0.4787 -3.7525 9 6 0.7629 -0.1590 -4.3942 10 1 0.7052 0.8432 -4.8188 11 7 0.2906 -1.1954 -5.3156 12 6 -0.5696 -0.8778 -6.3034 13 8 -0.9530 0.2660 -6.4291 14 6 -1.0549 -1.9438 -7.2516 15 6 0.0107 -2.2109 -8.3244 16 6 -0.5051 -3.3052 -9.2615 17 6 -1.8968 -2.9788 -9.7229 18 6 -2.4156 -3.6429 -10.9723 19 8 -2.6346 -5.0317 -10.7176 20 14 -4.0203 -2.8439 -11.4795 21 6 -2.6827 -2.1462 -9.0886 22 7 -2.2727 -1.4864 -7.9369 23 6 0.1605 -0.2680 -2.9835 24 1 -0.3634 0.5139 -0.8900 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5139 0.8900 27 1 3.0487 -0.6928 1.1992 28 1 1.5954 -0.1787 2.0894 29 1 1.5953 -1.7201 1.1994 30 1 1.5241 -1.6909 -1.2454 31 1 3.0450 -0.7706 -1.1558 32 1 2.3418 -1.5453 -3.7006 33 1 2.9480 0.1027 -4.1649 34 1 0.5971 -2.1102 -5.2149 35 1 -1.2631 -2.8611 -6.7010 36 1 0.9341 -2.5415 -7.8487 37 1 0.1946 -1.2990 -8.8926 38 1 0.1538 -3.3794 -10.1267 39 1 -0.5146 -4.2582 -8.7326 40 1 -1.6849 -3.5312 -11.7733 41 1 -2.9693 -5.5235 -11.4800 42 1 -4.5262 -3.4684 -12.7282 43 1 -5.0250 -2.9893 -10.3957 44 1 -3.6759 -1.9648 -9.4721 45 1 -2.7815 -0.7367 -7.5903 46 1 -0.5998 0.4845 -2.7740 47 1 -0.1578 -1.2770 -2.7214 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_15413834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:41 Heat of formation + Delta-G solvation = 83.955710 kcal Electronic energy + Delta-G solvation = -24622.327298 eV Core-core repulsion = 21119.107323 eV Total energy + Delta-G solvation = -3503.219975 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.197 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.25608 -41.37129 -39.86628 -38.87161 -37.50929 -34.85062 -33.34532 -32.98177 -30.16994 -29.50405 -27.68365 -26.69068 -25.82031 -25.35388 -24.07019 -23.22524 -21.72962 -21.03639 -19.17739 -19.07927 -19.03022 -18.44556 -18.05441 -17.58229 -17.38953 -16.94555 -16.24348 -16.14105 -15.87580 -15.45136 -15.25989 -14.82176 -14.54883 -14.42849 -14.08091 -13.92784 -13.87756 -13.70229 -13.56816 -13.51544 -13.40833 -13.29112 -13.07778 -12.94614 -12.83511 -12.49114 -12.31404 -11.82091 -11.78233 -11.73388 -11.49372 -11.28618 -10.87761 -10.31740 -10.10928 -8.50694 -4.95531 1.03575 1.26767 1.35176 1.42317 1.53987 1.88401 1.92104 2.60367 2.89689 2.97023 3.21100 3.35225 3.47004 3.49783 3.61464 3.71069 3.75118 3.79774 3.89123 3.98342 4.02542 4.15733 4.21038 4.21825 4.33589 4.40165 4.43096 4.47850 4.55570 4.61797 4.68187 4.71556 4.74197 4.76351 4.77762 4.84843 4.88265 4.94921 4.98023 5.07137 5.17287 5.21489 5.24446 5.50851 5.55607 6.22660 6.42283 6.64149 6.77767 7.09219 Molecular weight = 297.20amu Principal moments of inertia in cm(-1) A = 0.035390 B = 0.002667 C = 0.002637 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 790.993461 B =10494.918793 C =10617.486467 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.012 3.988 6 C -0.117 4.117 7 H 0.126 0.874 8 C -0.128 4.128 9 C 0.096 3.904 10 H 0.086 0.914 11 N -0.702 5.702 12 C 0.517 3.483 13 O -0.572 6.572 14 C 0.133 3.867 15 C -0.119 4.119 16 C -0.054 4.054 17 C -0.245 4.245 18 C -0.057 4.057 19 O -0.562 6.562 20 Si 0.736 3.264 21 C 0.135 3.865 22 N -0.737 5.737 23 C -0.152 4.152 24 H 0.115 0.885 25 H 0.121 0.879 26 H 0.125 0.875 27 H 0.127 0.873 28 H 0.123 0.877 29 H 0.119 0.881 30 H 0.139 0.861 31 H 0.149 0.851 32 H 0.114 0.886 33 H 0.078 0.922 34 H 0.419 0.581 35 H 0.105 0.895 36 H 0.105 0.895 37 H 0.062 0.938 38 H 0.074 0.926 39 H 0.066 0.934 40 H 0.079 0.921 41 H 0.387 0.613 42 H -0.300 1.300 43 H -0.298 1.298 44 H 0.134 0.866 45 H 0.408 0.592 46 H 0.077 0.923 47 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.134 5.469 31.309 34.784 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.188 4.188 5 C -0.110 4.110 6 C -0.136 4.136 7 H 0.143 0.857 8 C -0.166 4.166 9 C -0.009 4.009 10 H 0.104 0.896 11 N -0.354 5.354 12 C 0.303 3.697 13 O -0.451 6.451 14 C 0.024 3.976 15 C -0.157 4.157 16 C -0.091 4.091 17 C -0.255 4.255 18 C -0.168 4.168 19 O -0.371 6.371 20 Si 0.644 3.356 21 C 0.015 3.985 22 N -0.370 5.370 23 C -0.191 4.191 24 H 0.133 0.867 25 H 0.140 0.860 26 H 0.144 0.856 27 H 0.146 0.854 28 H 0.142 0.858 29 H 0.137 0.863 30 H 0.157 0.843 31 H 0.167 0.833 32 H 0.132 0.868 33 H 0.097 0.903 34 H 0.257 0.743 35 H 0.123 0.877 36 H 0.123 0.877 37 H 0.080 0.920 38 H 0.093 0.907 39 H 0.085 0.915 40 H 0.097 0.903 41 H 0.236 0.764 42 H -0.228 1.228 43 H -0.226 1.226 44 H 0.151 0.849 45 H 0.244 0.756 46 H 0.095 0.905 47 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges 13.265 6.027 31.725 34.911 hybrid contribution -0.495 -1.004 -0.862 1.413 sum 12.769 5.023 30.863 33.776 Atomic orbital electron populations 1.24270 0.76795 1.09567 1.09325 1.44839 1.15522 1.19579 1.14711 0.72464 1.24124 1.05802 1.02314 0.86546 1.23900 1.06113 0.99302 0.81717 1.22698 0.95943 1.02033 0.92952 0.85653 1.23333 0.95490 1.03821 0.93971 1.22716 0.96804 0.92406 0.88966 0.89592 1.45803 1.45804 1.13598 1.30145 1.20674 0.78956 0.88848 0.81226 1.90740 1.58421 1.22645 1.73285 1.21162 0.87128 0.95901 0.93376 1.21839 0.97629 0.99732 0.96541 1.19979 0.92406 0.97699 0.99013 1.20098 0.97818 1.07092 1.00528 1.24695 1.08427 0.84532 0.99119 1.86553 1.87576 1.20679 1.42272 0.94586 0.75428 0.90084 0.75468 1.20417 0.96601 0.94285 0.87243 1.44326 1.28020 1.37478 1.27211 1.23854 0.96952 1.04090 0.94162 0.86665 0.86015 0.85606 0.85447 0.85838 0.86260 0.84270 0.83275 0.86765 0.90332 0.74307 0.87705 0.87658 0.91953 0.90744 0.91536 0.90266 0.76405 1.22840 1.22600 0.84903 0.75591 0.90474 0.87136 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.55 8.57 127.69 1.09 4.65 16 2 N -0.37 24.61 0.66 -948.84 -0.62 23.98 16 3 H 0.44 -30.62 8.40 -89.69 -0.75 -31.38 16 4 C -0.05 2.98 9.19 127.69 1.17 4.15 16 5 C 0.01 -0.73 4.57 86.30 0.39 -0.34 16 6 C -0.12 6.32 3.30 -10.27 -0.03 6.29 16 7 H 0.13 -6.92 8.09 -2.39 -0.02 -6.94 16 8 C -0.13 5.79 7.39 31.12 0.23 6.02 16 9 C 0.10 -3.50 4.24 45.52 0.19 -3.31 16 10 H 0.09 -2.46 7.46 -2.39 -0.02 -2.48 16 11 N -0.70 22.65 5.35 -440.02 -2.36 20.29 16 12 C 0.52 -11.32 7.10 87.66 0.62 -10.70 16 13 O -0.57 7.22 15.67 -3.04 -0.05 7.17 16 14 C 0.13 -2.78 3.36 44.33 0.15 -2.63 16 15 C -0.12 2.43 5.47 30.79 0.17 2.60 16 16 C -0.05 0.85 5.86 29.70 0.17 1.03 16 17 C -0.25 2.99 5.39 -16.53 -0.09 2.91 16 18 C -0.06 0.66 2.80 71.24 0.20 0.86 16 19 O -0.56 4.95 12.85 -148.98 -1.92 3.03 16 20 Si 0.74 -8.44 29.92 68.60 2.05 -6.39 16 21 C 0.14 -1.75 9.60 83.64 0.80 -0.94 16 22 N -0.74 11.40 5.47 -329.17 -1.80 9.60 16 23 C -0.15 7.04 5.69 31.12 0.18 7.21 16 24 H 0.11 -6.82 5.13 -2.39 -0.01 -6.83 16 25 H 0.12 -7.49 8.11 -2.39 -0.02 -7.51 16 26 H 0.13 -7.79 8.14 -2.39 -0.02 -7.81 16 27 H 0.13 -8.23 8.11 -2.39 -0.02 -8.25 16 28 H 0.12 -7.84 8.14 -2.39 -0.02 -7.86 16 29 H 0.12 -7.56 8.14 -2.38 -0.02 -7.58 16 30 H 0.14 -8.85 7.79 -2.39 -0.02 -8.86 16 31 H 0.15 -9.64 8.09 -2.39 -0.02 -9.66 16 32 H 0.11 -5.50 8.08 -2.39 -0.02 -5.52 16 33 H 0.08 -3.26 8.14 -2.39 -0.02 -3.28 16 34 H 0.42 -15.98 8.73 -92.71 -0.81 -16.79 16 35 H 0.11 -2.54 8.14 -2.39 -0.02 -2.56 16 36 H 0.11 -2.78 8.14 -2.39 -0.02 -2.79 16 37 H 0.06 -1.01 8.14 -2.38 -0.02 -1.03 16 38 H 0.07 -1.15 8.14 -2.39 -0.02 -1.17 16 39 H 0.07 -1.02 8.14 -2.39 -0.02 -1.04 16 40 H 0.08 -1.12 7.96 -2.39 -0.02 -1.14 16 41 H 0.39 -5.87 8.74 -74.06 -0.65 -6.52 16 42 H -0.30 1.60 7.11 99.48 0.71 2.31 16 43 H -0.30 1.59 6.87 99.48 0.68 2.27 16 44 H 0.13 -1.80 4.32 -2.91 -0.01 -1.81 16 45 H 0.41 -6.18 8.09 -92.71 -0.75 -6.93 16 46 H 0.08 -3.36 7.19 -2.38 -0.02 -3.37 16 47 H 0.11 -5.37 7.90 -2.39 -0.02 -5.39 16 Total: 1.00 -83.07 361.92 -1.39 -84.47 By element: Atomic # 1 Polarization: -157.99 SS G_CDS: -1.96 Total: -159.94 kcal Atomic # 6 Polarization: 12.54 SS G_CDS: 5.26 Total: 17.79 kcal Atomic # 7 Polarization: 58.65 SS G_CDS: -4.78 Total: 53.87 kcal Atomic # 8 Polarization: 12.16 SS G_CDS: -1.96 Total: 10.20 kcal Atomic # 14 Polarization: -8.44 SS G_CDS: 2.05 Total: -6.39 kcal Total: -83.07 -1.39 -84.47 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_15413834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.421 kcal (2) G-P(sol) polarization free energy of solvation -83.073 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.348 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.393 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.466 kcal (6) G-S(sol) free energy of system = (1) + (5) 83.956 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds