Wall clock time and date at job start Sun Mar 7 2021 06:26:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 H 1.00892 * 109.47479 * 2 1 4 4 C 1.46904 * 109.46512 * 119.99661 * 2 1 3 5 5 C 1.46898 * 109.47071 * 239.99422 * 2 1 3 6 6 C 1.52996 * 109.46982 * 175.00409 * 5 2 1 7 7 H 1.08996 * 112.85139 * 43.80844 * 6 5 2 8 8 C 1.53783 * 113.61045 * 175.00224 * 6 5 2 9 9 C 1.53784 * 87.08207 * 139.98213 * 8 6 5 10 10 H 1.08996 * 113.61383 * 89.19552 * 9 8 6 11 11 N 1.46493 * 113.61505 * 220.01925 * 9 8 6 12 12 C 1.34777 * 120.00096 * 204.99775 * 11 9 8 13 13 O 1.21284 * 120.00031 * 4.85371 * 12 11 9 14 14 C 1.50697 * 119.99954 * 184.85365 * 12 11 9 15 15 C 1.53044 * 109.32848 * 215.77825 * 14 12 11 16 16 C 1.53544 * 108.56094 * 190.16789 * 15 14 12 17 17 N 1.47029 * 107.70855 * 60.92100 * 16 15 14 18 18 C 1.38960 * 118.86028 * 316.44360 * 17 16 15 19 19 C 1.31120 * 121.86879 * 13.18701 * 18 17 16 20 20 C 1.50699 * 118.54628 * 179.64113 * 19 18 17 21 21 O 1.42902 * 109.47318 * 109.00438 * 20 19 18 22 22 Si 1.86304 * 109.47011 * 349.00558 * 20 19 18 23 23 C 1.53782 * 113.61318 * 272.49394 * 6 5 2 24 24 H 1.08997 * 109.47781 * 180.02562 * 1 2 3 25 25 H 1.09001 * 109.47198 * 300.00856 * 1 2 3 26 26 H 1.08998 * 109.46752 * 60.00122 * 1 2 3 27 27 H 1.08999 * 109.46802 * 179.97438 * 4 2 1 28 28 H 1.09000 * 109.47474 * 299.99765 * 4 2 1 29 29 H 1.09001 * 109.46984 * 59.99946 * 4 2 1 30 30 H 1.09001 * 109.46848 * 54.99894 * 5 2 1 31 31 H 1.09001 * 109.46914 * 295.00545 * 5 2 1 32 32 H 1.08998 * 113.61777 * 25.42766 * 8 6 5 33 33 H 1.09004 * 113.68819 * 254.53735 * 8 6 5 34 34 H 0.97005 * 120.00046 * 24.99425 * 11 9 8 35 35 H 1.08999 * 109.19164 * 335.35193 * 14 12 11 36 36 H 1.09004 * 109.61870 * 70.45244 * 15 14 12 37 37 H 1.08993 * 109.77851 * 309.98675 * 15 14 12 38 38 H 1.09000 * 109.81819 * 180.49266 * 16 15 14 39 39 H 1.09000 * 109.82579 * 301.34958 * 16 15 14 40 40 H 0.97009 * 120.55630 * 136.33914 * 17 16 15 41 41 H 1.07998 * 119.05783 * 193.22158 * 18 17 16 42 42 H 1.09005 * 109.46944 * 229.00968 * 20 19 18 43 43 H 0.96702 * 113.99762 * 179.97438 * 21 20 19 44 44 H 1.48501 * 109.99857 * 298.68347 * 22 20 19 45 45 H 1.48498 * 110.00005 * 60.00401 * 22 20 19 46 46 H 1.09002 * 113.60656 * 105.47294 * 23 6 5 47 47 H 1.08994 * 113.61473 * 334.57457 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9586 -0.6925 1.1996 5 6 1.9587 -0.6926 -1.1994 6 6 3.4835 -0.5847 -1.2637 7 1 3.9615 -0.7641 -0.3008 8 6 4.1091 -1.3824 -2.4201 9 6 5.0668 -0.1953 -2.6168 10 1 5.9792 -0.2678 -2.0250 11 7 5.3246 0.1240 -4.0230 12 6 6.4647 0.7516 -4.3735 13 8 7.3161 0.9733 -3.5388 14 6 6.6814 1.1778 -5.8026 15 6 8.1602 1.0141 -6.1613 16 6 8.4109 1.6854 -7.5193 17 7 8.0819 3.1117 -7.3807 18 6 6.9260 3.4701 -6.6977 19 6 6.2615 2.6110 -5.9631 20 6 5.0216 3.0825 -5.2480 21 8 3.8678 2.5100 -5.8670 22 14 4.9192 4.9404 -5.3418 23 6 3.9817 0.6849 -1.9742 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5140 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 3.0486 -0.6929 1.1994 28 1 1.5953 -0.1786 2.0895 29 1 1.5952 -1.7201 1.1996 30 1 1.5240 -0.2332 -2.0871 31 1 1.6702 -1.7428 -1.1556 32 1 3.4311 -1.5401 -3.2589 33 1 4.6080 -2.2976 -2.1013 34 1 4.6748 -0.1163 -4.7020 35 1 6.0792 0.5498 -6.4591 36 1 8.4059 -0.0459 -6.2261 37 1 8.7791 1.4874 -5.3992 38 1 9.4584 1.5731 -7.7992 39 1 7.7748 1.2314 -8.2791 40 1 8.6627 3.7907 -7.7584 41 1 6.5646 4.4849 -6.7746 42 1 5.0648 2.7733 -4.2036 43 1 3.0316 2.7705 -5.4571 44 1 6.0977 5.5484 -4.6734 45 1 4.8597 5.3747 -6.7606 46 1 4.3775 1.4390 -1.2938 47 1 3.2689 1.0924 -2.6909 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:45 Heat of formation + Delta-G solvation = 82.313669 kcal Electronic energy + Delta-G solvation = -25683.918946 eV Core-core repulsion = 22180.627767 eV Total energy + Delta-G solvation = -3503.291179 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.197 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -42.15572 -41.44556 -39.83109 -38.72901 -37.49001 -34.66280 -33.49178 -33.02519 -30.05709 -29.34341 -27.44071 -26.78212 -26.29807 -25.48932 -23.62030 -23.22569 -21.72272 -20.83115 -19.31021 -19.15437 -18.90343 -18.37797 -17.89372 -17.81487 -17.30097 -16.89790 -16.60875 -16.10322 -15.72069 -15.23531 -15.16375 -14.91074 -14.65617 -14.48473 -14.15134 -13.82698 -13.78384 -13.72324 -13.51049 -13.40981 -13.36233 -13.19205 -13.13461 -12.95517 -12.84781 -12.45529 -12.16030 -12.08354 -11.72451 -11.69238 -11.56331 -11.42502 -10.79480 -10.21081 -9.97871 -8.65927 -5.05783 1.04750 1.08413 1.29111 1.55644 1.60631 1.94678 2.25253 2.43916 2.97822 3.02582 3.23906 3.43057 3.47128 3.50453 3.53202 3.72490 3.79972 3.86541 3.91113 3.92978 4.04155 4.15596 4.20987 4.24528 4.31694 4.41359 4.41911 4.44977 4.50423 4.56337 4.63409 4.66369 4.74459 4.77473 4.80595 4.86696 4.92287 4.94053 5.02797 5.03535 5.10820 5.11164 5.23338 5.30633 5.62794 6.11076 6.53651 6.67152 7.02891 7.25312 Molecular weight = 297.20amu Principal moments of inertia in cm(-1) A = 0.019696 B = 0.004359 C = 0.003813 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1421.249214 B = 6422.271942 C = 7341.085753 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.371 5.371 3 H 0.437 0.563 4 C -0.055 4.055 5 C 0.013 3.987 6 C -0.119 4.119 7 H 0.122 0.878 8 C -0.128 4.128 9 C 0.092 3.908 10 H 0.079 0.921 11 N -0.701 5.701 12 C 0.531 3.469 13 O -0.586 6.586 14 C -0.035 4.035 15 C -0.129 4.129 16 C 0.121 3.879 17 N -0.753 5.753 18 C 0.126 3.874 19 C -0.243 4.243 20 C -0.028 4.028 21 O -0.550 6.550 22 Si 0.748 3.252 23 C -0.150 4.150 24 H 0.118 0.882 25 H 0.123 0.877 26 H 0.129 0.871 27 H 0.117 0.883 28 H 0.126 0.874 29 H 0.121 0.879 30 H 0.150 0.850 31 H 0.140 0.860 32 H 0.113 0.887 33 H 0.072 0.928 34 H 0.417 0.583 35 H 0.105 0.895 36 H 0.088 0.912 37 H 0.056 0.944 38 H 0.097 0.903 39 H 0.071 0.929 40 H 0.409 0.591 41 H 0.117 0.883 42 H 0.075 0.925 43 H 0.398 0.602 44 H -0.313 1.313 45 H -0.301 1.301 46 H 0.076 0.924 47 H 0.120 0.880 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -22.683 -8.305 17.469 29.811 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.274 0.726 4 C -0.197 4.197 5 C -0.109 4.109 6 C -0.138 4.138 7 H 0.140 0.860 8 C -0.167 4.167 9 C -0.013 4.013 10 H 0.097 0.903 11 N -0.352 5.352 12 C 0.318 3.682 13 O -0.466 6.466 14 C -0.057 4.057 15 C -0.168 4.168 16 C -0.004 4.004 17 N -0.383 5.383 18 C 0.004 3.996 19 C -0.254 4.254 20 C -0.140 4.140 21 O -0.358 6.358 22 Si 0.658 3.342 23 C -0.188 4.188 24 H 0.137 0.863 25 H 0.141 0.859 26 H 0.148 0.852 27 H 0.136 0.864 28 H 0.144 0.856 29 H 0.140 0.860 30 H 0.168 0.832 31 H 0.158 0.842 32 H 0.131 0.869 33 H 0.091 0.909 34 H 0.255 0.745 35 H 0.123 0.877 36 H 0.107 0.893 37 H 0.075 0.925 38 H 0.115 0.885 39 H 0.089 0.911 40 H 0.244 0.756 41 H 0.134 0.866 42 H 0.093 0.907 43 H 0.248 0.752 44 H -0.242 1.242 45 H -0.230 1.230 46 H 0.095 0.905 47 H 0.139 0.861 Dipole moment (debyes) X Y Z Total from point charges -21.374 -8.094 17.391 28.719 hybrid contribution 1.334 0.380 -0.751 1.578 sum -20.039 -7.714 16.640 27.166 Atomic orbital electron populations 1.24141 0.75319 1.09512 1.09838 1.44796 1.16065 1.19344 1.14544 0.72597 1.24181 1.05600 1.02655 0.87295 1.23889 0.94578 1.03676 0.88772 1.22752 0.93843 0.96960 1.00262 0.85997 1.23327 0.97588 0.96659 0.99117 1.22687 0.98203 0.98516 0.81894 0.90262 1.45895 1.20469 1.58885 1.09971 1.20547 0.81532 0.76159 0.89970 1.90699 1.45171 1.57052 1.53661 1.19652 0.97476 0.94687 0.93860 1.21813 0.95097 1.02072 0.97835 1.21714 1.02144 0.80290 0.96208 1.44678 1.24810 1.07974 1.60835 1.20471 0.88902 0.97350 0.92861 1.19897 1.01513 0.95829 1.08187 1.24139 0.85356 1.07346 0.97193 1.86498 1.15944 1.73377 1.60012 0.95122 0.85749 0.74880 0.78409 1.23770 0.98134 0.96721 1.00162 0.86295 0.85851 0.85214 0.86430 0.85583 0.86003 0.83187 0.84195 0.86850 0.90938 0.74517 0.87698 0.89321 0.92510 0.88491 0.91119 0.75625 0.86632 0.90685 0.75182 1.24178 1.22975 0.90546 0.86130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.02 9.19 127.69 1.17 4.20 16 2 N -0.37 24.81 0.66 -948.84 -0.62 24.19 16 3 H 0.44 -30.48 8.44 -89.70 -0.76 -31.23 16 4 C -0.05 3.47 8.98 127.69 1.15 4.61 16 5 C 0.01 -0.80 4.48 86.30 0.39 -0.42 16 6 C -0.12 6.32 3.58 -10.27 -0.04 6.28 16 7 H 0.12 -6.56 6.10 -2.39 -0.01 -6.57 16 8 C -0.13 5.55 7.39 31.12 0.23 5.78 16 9 C 0.09 -3.12 4.27 45.52 0.19 -2.92 16 10 H 0.08 -2.01 7.42 -2.39 -0.02 -2.03 16 11 N -0.70 19.75 5.26 -440.05 -2.31 17.44 16 12 C 0.53 -8.98 5.28 87.66 0.46 -8.51 16 13 O -0.59 4.12 15.67 -3.04 -0.05 4.07 16 14 C -0.04 0.57 2.70 -12.43 -0.03 0.54 16 15 C -0.13 1.77 5.31 30.79 0.16 1.93 16 16 C 0.12 -1.86 7.15 86.46 0.62 -1.24 16 17 N -0.75 9.62 5.83 -345.86 -2.02 7.60 16 18 C 0.13 -1.40 9.61 83.40 0.80 -0.60 16 19 C -0.24 3.47 5.06 -16.76 -0.08 3.38 16 20 C -0.03 0.60 2.42 71.24 0.17 0.78 16 21 O -0.55 14.67 12.86 -148.98 -1.92 12.75 16 22 Si 0.75 -14.23 29.96 68.60 2.05 -12.17 16 23 C -0.15 6.82 7.43 31.12 0.23 7.05 16 24 H 0.12 -7.59 8.14 -2.39 -0.02 -7.61 16 25 H 0.12 -7.91 8.14 -2.39 -0.02 -7.93 16 26 H 0.13 -8.52 8.11 -2.39 -0.02 -8.54 16 27 H 0.12 -7.20 6.10 -2.39 -0.01 -7.22 16 28 H 0.13 -7.90 8.14 -2.39 -0.02 -7.92 16 29 H 0.12 -7.58 8.11 -2.39 -0.02 -7.60 16 30 H 0.15 -9.78 7.79 -2.39 -0.02 -9.80 16 31 H 0.14 -8.83 8.09 -2.39 -0.02 -8.85 16 32 H 0.11 -5.21 8.08 -2.39 -0.02 -5.23 16 33 H 0.07 -2.82 8.14 -2.39 -0.02 -2.84 16 34 H 0.42 -13.64 8.68 -92.70 -0.80 -14.44 16 35 H 0.11 -2.04 8.07 -2.39 -0.02 -2.06 16 36 H 0.09 -1.42 8.14 -2.38 -0.02 -1.44 16 37 H 0.06 -0.42 7.51 -2.39 -0.02 -0.44 16 38 H 0.10 -1.73 8.14 -2.39 -0.02 -1.75 16 39 H 0.07 -1.17 8.14 -2.39 -0.02 -1.19 16 40 H 0.41 -6.26 8.96 -92.70 -0.83 -7.09 16 41 H 0.12 -1.23 4.35 -2.91 -0.01 -1.24 16 42 H 0.08 -1.84 6.76 -2.38 -0.02 -1.86 16 43 H 0.40 -15.15 8.74 -74.06 -0.65 -15.80 16 44 H -0.31 2.97 7.11 99.48 0.71 3.67 16 45 H -0.30 3.20 6.85 99.48 0.68 3.88 16 46 H 0.08 -3.28 8.14 -2.39 -0.02 -3.30 16 47 H 0.12 -6.01 7.90 -2.39 -0.02 -6.03 16 Total: 1.00 -86.22 361.37 -1.47 -87.70 By element: Atomic # 1 Polarization: -160.40 SS G_CDS: -2.03 Total: -162.43 kcal Atomic # 6 Polarization: 15.43 SS G_CDS: 5.43 Total: 20.86 kcal Atomic # 7 Polarization: 54.19 SS G_CDS: -4.96 Total: 49.23 kcal Atomic # 8 Polarization: 18.78 SS G_CDS: -1.96 Total: 16.82 kcal Atomic # 14 Polarization: -14.23 SS G_CDS: 2.05 Total: -12.17 kcal Total: -86.22 -1.47 -87.70 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.010 kcal (2) G-P(sol) polarization free energy of solvation -86.223 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 83.787 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.473 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -87.696 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.314 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds