Wall clock time and date at job start Sun Mar 7 2021 06:26:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00904 * 109.47303 * 2 1 4 4 C 1.46895 * 109.47290 * 120.00538 * 2 1 3 5 5 C 1.46905 * 109.46899 * 240.00502 * 2 1 3 6 6 C 1.53002 * 109.47056 * 175.00010 * 5 2 1 7 7 H 1.09004 * 112.84739 * 316.19329 * 6 5 2 8 8 C 1.53783 * 113.69121 * 87.46421 * 6 5 2 9 9 C 1.53770 * 87.08116 * 139.99283 * 8 6 5 10 10 H 1.09001 * 113.69749 * 89.12774 * 9 8 6 11 11 N 1.46504 * 113.61603 * 220.01475 * 9 8 6 12 12 C 1.34769 * 120.00376 * 252.49853 * 11 9 8 13 13 O 1.21629 * 120.00056 * 359.97438 * 12 11 9 14 14 C 1.47271 * 119.99940 * 179.97438 * 12 11 9 15 15 C 1.36338 * 126.96666 * 179.97438 * 14 12 11 16 16 C 1.50995 * 126.79335 * 0.05904 * 15 14 12 17 17 C 1.53392 * 108.25372 * 164.33896 * 16 15 14 18 18 C 1.53153 * 109.04510 * 48.45534 * 17 16 15 19 19 C 1.53125 * 109.52496 * 290.42670 * 18 17 16 20 20 N 1.35214 * 108.65688 * 180.02562 * 15 14 12 21 21 C 1.36425 * 109.89951 * 359.96349 * 20 15 14 22 22 C 1.50698 * 125.49132 * 180.29364 * 21 20 15 23 23 O 1.42911 * 109.47005 * 329.71794 * 22 21 20 24 24 Si 1.86299 * 109.47342 * 209.71811 * 22 21 20 25 25 C 1.34495 * 109.01225 * 0.02920 * 21 20 15 26 26 C 1.53780 * 87.08532 * 334.56558 * 9 8 6 27 27 H 1.08994 * 109.47290 * 179.97438 * 1 2 3 28 28 H 1.09003 * 109.46920 * 299.99606 * 1 2 3 29 29 H 1.09002 * 109.47245 * 59.99812 * 1 2 3 30 30 H 1.09003 * 109.47022 * 299.99794 * 4 2 1 31 31 H 1.09003 * 109.47682 * 59.99754 * 4 2 1 32 32 H 1.09003 * 109.47274 * 180.02562 * 4 2 1 33 33 H 1.09001 * 109.47296 * 54.99948 * 5 2 1 34 34 H 1.09000 * 109.46606 * 294.99485 * 5 2 1 35 35 H 1.09000 * 113.61376 * 25.43674 * 8 6 5 36 36 H 1.08999 * 113.61205 * 254.54032 * 8 6 5 37 37 H 0.97000 * 119.99536 * 72.49810 * 11 9 8 38 38 H 1.09004 * 109.70599 * 284.02906 * 16 15 14 39 39 H 1.09003 * 109.70724 * 44.60347 * 16 15 14 40 40 H 1.09007 * 109.54015 * 168.32797 * 17 16 15 41 41 H 1.09002 * 109.54352 * 288.49682 * 17 16 15 42 42 H 1.09006 * 109.46577 * 50.44832 * 18 17 16 43 43 H 1.09009 * 109.46188 * 170.40582 * 18 17 16 44 44 H 1.09013 * 109.56240 * 170.83617 * 19 18 17 45 45 H 1.08997 * 109.56432 * 291.06133 * 19 18 17 46 46 H 1.08999 * 109.47396 * 89.71480 * 22 21 20 47 47 H 0.96697 * 113.99608 * 179.97438 * 23 22 21 48 48 H 1.48497 * 109.99923 * 298.68273 * 24 22 21 49 49 H 1.48506 * 109.99923 * 59.99881 * 24 22 21 50 50 H 1.08000 * 126.81444 * 180.02562 * 25 21 20 51 51 H 1.08999 * 113.61899 * 139.97780 * 26 9 8 52 52 H 1.08996 * 113.61434 * 270.88589 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6926 1.1993 5 6 1.9586 -0.6924 -1.1995 6 6 3.4834 -0.5845 -1.2640 7 1 3.8472 0.4157 -1.0286 8 6 4.2148 -1.7015 -0.5010 9 6 5.2170 -1.7339 -1.6667 10 1 6.0555 -1.0485 -1.5427 11 7 5.6384 -3.0861 -2.0412 12 6 6.8812 -3.5121 -1.7411 13 8 7.6534 -2.7737 -1.1598 14 6 7.3045 -4.8716 -2.1171 15 6 8.5195 -5.4453 -1.8862 16 6 9.7013 -4.8121 -1.1915 17 6 10.6873 -5.9239 -0.8112 18 6 10.9200 -6.8234 -2.0287 19 6 9.6490 -7.6250 -2.3231 20 7 8.5067 -6.7016 -2.3860 21 6 7.2913 -6.9660 -2.9464 22 6 6.8931 -8.2641 -3.6002 23 8 8.0462 -8.8801 -4.1774 24 14 5.6357 -7.9280 -4.9331 25 6 6.5039 -5.8835 -2.8160 26 6 4.0889 -1.1737 -2.5490 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5139 -0.8900 30 1 1.5953 -0.1788 2.0894 31 1 1.5953 -1.7203 1.1993 32 1 3.0487 -0.6922 1.1995 33 1 1.5239 -0.2328 -2.0872 34 1 1.6702 -1.7427 -1.1558 35 1 3.6311 -2.6167 -0.4013 36 1 4.6520 -1.3724 0.4417 37 1 5.0227 -3.6749 -2.5051 38 1 10.1866 -4.1043 -1.8634 39 1 9.3654 -4.2946 -0.2929 40 1 11.6332 -5.4811 -0.4989 41 1 10.2736 -6.5143 0.0063 42 1 11.1695 -6.2077 -2.8929 43 1 11.7421 -7.5089 -1.8220 44 1 9.7553 -8.1402 -3.2779 45 1 9.4862 -8.3553 -1.5305 46 1 6.4613 -8.9299 -2.8529 47 1 7.8639 -9.7223 -4.6163 48 1 4.4189 -7.3165 -4.3409 49 1 6.2123 -7.0214 -5.9583 50 1 5.4846 -5.7798 -3.1575 51 1 4.4245 -0.4184 -3.2597 52 1 3.4709 -1.9445 -3.0093 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_16915396.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:50 Heat of formation + Delta-G solvation = 102.637016 kcal Electronic energy + Delta-G solvation = -30010.793133 eV Core-core repulsion = 26096.393340 eV Total energy + Delta-G solvation = -3914.399793 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.212 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -42.90474 -42.23209 -40.61100 -38.94952 -37.89921 -36.98113 -34.64023 -33.62073 -31.36004 -30.41373 -29.55433 -29.34016 -26.80560 -26.70620 -25.85918 -24.67911 -24.55753 -23.02652 -21.80676 -21.37724 -20.96371 -19.54447 -19.10801 -18.56699 -18.16339 -18.01183 -17.44815 -16.95646 -16.79181 -16.56677 -16.06518 -15.95563 -15.81224 -15.57880 -15.26278 -15.20878 -14.81353 -14.59506 -14.45919 -14.18500 -13.94743 -13.87845 -13.60760 -13.54840 -13.43946 -13.34723 -13.31253 -13.09879 -12.93370 -12.85931 -12.62767 -12.35220 -12.16588 -12.07846 -11.92179 -11.81211 -11.77230 -11.52057 -11.02327 -10.59060 -10.14970 -9.72220 -9.16557 -4.93477 0.56694 0.93183 1.01342 1.34359 1.64988 1.74184 2.03349 2.30716 2.36841 2.87125 2.94792 3.13103 3.18851 3.32403 3.43816 3.45265 3.50611 3.65431 3.69753 3.71353 3.74631 3.76251 3.91572 4.02704 4.13089 4.19468 4.20445 4.21570 4.29647 4.31549 4.38381 4.41007 4.45462 4.46945 4.61699 4.65050 4.67418 4.68792 4.72228 4.74462 4.77099 4.81870 4.85712 4.86609 4.88428 4.92639 5.02170 5.03281 5.10357 5.20064 5.51887 5.57804 5.92557 6.07156 6.50047 6.78531 7.21780 Molecular weight = 335.21amu Principal moments of inertia in cm(-1) A = 0.013754 B = 0.002988 C = 0.002586 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2035.253079 B = 9367.428723 C =10823.435314 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.369 5.369 3 H 0.439 0.561 4 C -0.058 4.058 5 C 0.013 3.987 6 C -0.113 4.113 7 H 0.129 0.871 8 C -0.150 4.150 9 C 0.095 3.905 10 H 0.086 0.914 11 N -0.708 5.708 12 C 0.591 3.409 13 O -0.585 6.585 14 C -0.258 4.258 15 C 0.098 3.902 16 C -0.051 4.051 17 C -0.125 4.125 18 C -0.136 4.136 19 C 0.099 3.901 20 N -0.425 5.425 21 C 0.022 3.978 22 C -0.059 4.059 23 O -0.568 6.568 24 Si 0.803 3.197 25 C -0.185 4.185 26 C -0.130 4.130 27 H 0.119 0.881 28 H 0.125 0.875 29 H 0.127 0.873 30 H 0.128 0.872 31 H 0.121 0.879 32 H 0.114 0.886 33 H 0.151 0.849 34 H 0.138 0.862 35 H 0.107 0.893 36 H 0.079 0.921 37 H 0.410 0.590 38 H 0.077 0.923 39 H 0.087 0.913 40 H 0.089 0.911 41 H 0.070 0.930 42 H 0.064 0.936 43 H 0.108 0.892 44 H 0.113 0.887 45 H 0.089 0.911 46 H 0.098 0.902 47 H 0.408 0.592 48 H -0.265 1.265 49 H -0.313 1.313 50 H 0.164 0.836 51 H 0.078 0.922 52 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -25.987 13.172 6.973 29.957 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.055 4.945 3 H 0.276 0.724 4 C -0.200 4.200 5 C -0.109 4.109 6 C -0.132 4.132 7 H 0.147 0.853 8 C -0.189 4.189 9 C -0.010 4.010 10 H 0.104 0.896 11 N -0.358 5.358 12 C 0.381 3.619 13 O -0.467 6.467 14 C -0.268 4.268 15 C -0.021 4.021 16 C -0.089 4.089 17 C -0.163 4.163 18 C -0.174 4.174 19 C -0.021 4.021 20 N -0.100 5.100 21 C -0.088 4.088 22 C -0.168 4.168 23 O -0.379 6.379 24 Si 0.706 3.294 25 C -0.209 4.209 26 C -0.168 4.168 27 H 0.137 0.863 28 H 0.143 0.857 29 H 0.146 0.854 30 H 0.146 0.854 31 H 0.139 0.861 32 H 0.132 0.868 33 H 0.168 0.832 34 H 0.156 0.844 35 H 0.125 0.875 36 H 0.097 0.903 37 H 0.247 0.753 38 H 0.096 0.904 39 H 0.105 0.895 40 H 0.108 0.892 41 H 0.089 0.911 42 H 0.083 0.917 43 H 0.126 0.874 44 H 0.131 0.869 45 H 0.107 0.893 46 H 0.115 0.885 47 H 0.261 0.739 48 H -0.191 1.191 49 H -0.241 1.241 50 H 0.181 0.819 51 H 0.097 0.903 52 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -25.476 14.261 7.214 30.074 hybrid contribution 0.840 0.142 0.147 0.865 sum -24.636 14.403 7.361 29.471 Atomic orbital electron populations 1.24133 0.75324 1.09513 1.09809 1.44824 1.16061 1.19287 1.14377 0.72405 1.24274 1.05547 1.02697 0.87479 1.23874 0.94664 1.03601 0.88790 1.22685 0.92890 1.00719 0.96925 0.85338 1.23835 0.97372 0.99902 0.97778 1.22731 0.96731 0.83169 0.98351 0.89589 1.45640 1.13447 1.16384 1.60350 1.17431 0.82129 0.85048 0.77281 1.90748 1.54298 1.57390 1.44278 1.20047 0.95796 0.96119 1.14829 1.20722 0.96880 0.85473 0.98998 1.20432 0.91287 0.97252 0.99927 1.21708 1.00133 0.96563 0.97847 1.21936 0.97057 0.99596 0.98779 1.22418 0.83113 0.91210 1.05353 1.44138 1.12026 1.11492 1.42380 1.20370 0.86611 0.98044 1.03734 1.24722 0.96319 0.91463 1.04267 1.86329 1.32553 1.42606 1.76388 0.94161 0.74003 0.86390 0.74863 1.21790 1.00291 0.91954 1.06839 1.23336 0.95714 1.01139 0.96649 0.86285 0.85662 0.85417 0.85365 0.86073 0.86804 0.83157 0.84444 0.87467 0.90273 0.75333 0.90441 0.89475 0.89221 0.91150 0.91718 0.87404 0.86859 0.89262 0.88468 0.73913 1.19076 1.24125 0.81850 0.90346 0.87269 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.90 9.19 127.69 1.17 4.07 16 2 N -0.37 23.73 0.66 -948.85 -0.62 23.11 16 3 H 0.44 -29.79 8.41 -89.69 -0.75 -30.55 16 4 C -0.06 3.45 8.57 127.69 1.09 4.54 16 5 C 0.01 -0.76 4.57 86.30 0.39 -0.37 16 6 C -0.11 5.65 3.30 -10.27 -0.03 5.62 16 7 H 0.13 -6.67 8.10 -2.38 -0.02 -6.69 16 8 C -0.15 6.19 5.69 31.12 0.18 6.37 16 9 C 0.09 -2.83 4.24 45.51 0.19 -2.63 16 10 H 0.09 -1.93 7.46 -2.39 -0.02 -1.95 16 11 N -0.71 15.87 5.35 -443.46 -2.37 13.49 16 12 C 0.59 -6.50 7.81 86.62 0.68 -5.82 16 13 O -0.59 2.36 14.94 -4.12 -0.06 2.30 16 14 C -0.26 2.34 6.28 -19.12 -0.12 2.22 16 15 C 0.10 -0.73 6.57 41.69 0.27 -0.45 16 16 C -0.05 0.46 5.32 30.07 0.16 0.62 16 17 C -0.12 1.67 5.98 30.78 0.18 1.86 16 18 C -0.14 1.96 5.92 30.69 0.18 2.14 16 19 C 0.10 -1.30 6.21 86.32 0.54 -0.76 16 20 N -0.43 4.01 3.11 -493.62 -1.54 2.47 16 21 C 0.02 -0.25 6.18 40.99 0.25 0.00 16 22 C -0.06 1.07 2.99 71.24 0.21 1.28 16 23 O -0.57 10.27 9.98 -148.98 -1.49 8.78 16 24 Si 0.80 -16.35 31.22 68.60 2.14 -14.21 16 25 C -0.19 2.36 9.09 23.64 0.21 2.57 16 26 C -0.13 5.17 7.39 31.12 0.23 5.40 16 27 H 0.12 -7.34 8.14 -2.39 -0.02 -7.36 16 28 H 0.12 -7.79 8.14 -2.39 -0.02 -7.81 16 29 H 0.13 -8.05 8.11 -2.39 -0.02 -8.07 16 30 H 0.13 -7.72 8.14 -2.39 -0.02 -7.74 16 31 H 0.12 -7.17 8.11 -2.39 -0.02 -7.19 16 32 H 0.11 -6.43 5.13 -2.39 -0.01 -6.44 16 33 H 0.15 -9.30 8.09 -2.39 -0.02 -9.32 16 34 H 0.14 -8.27 7.79 -2.39 -0.02 -8.29 16 35 H 0.11 -4.63 7.90 -2.39 -0.02 -4.65 16 36 H 0.08 -3.10 7.19 -2.39 -0.02 -3.12 16 37 H 0.41 -11.05 7.85 -92.71 -0.73 -11.78 16 38 H 0.08 -0.58 8.14 -2.39 -0.02 -0.60 16 39 H 0.09 -0.62 7.40 -2.39 -0.02 -0.64 16 40 H 0.09 -1.35 8.14 -2.38 -0.02 -1.37 16 41 H 0.07 -0.94 8.12 -2.39 -0.02 -0.96 16 42 H 0.06 -0.78 8.11 -2.38 -0.02 -0.79 16 43 H 0.11 -1.91 8.14 -2.38 -0.02 -1.93 16 44 H 0.11 -1.47 5.95 -2.38 -0.01 -1.49 16 45 H 0.09 -1.33 8.14 -2.39 -0.02 -1.35 16 46 H 0.10 -2.13 7.96 -2.39 -0.02 -2.15 16 47 H 0.41 -11.35 8.74 -74.06 -0.65 -11.99 16 48 H -0.26 5.13 6.88 99.48 0.68 5.81 16 49 H -0.31 3.14 7.11 99.48 0.71 3.85 16 50 H 0.16 -3.07 6.37 -2.91 -0.02 -3.09 16 51 H 0.08 -2.86 8.14 -2.39 -0.02 -2.88 16 52 H 0.11 -4.60 8.08 -2.39 -0.02 -4.61 16 Total: 1.00 -83.22 394.57 0.68 -82.54 By element: Atomic # 1 Polarization: -143.96 SS G_CDS: -1.18 Total: -145.14 kcal Atomic # 6 Polarization: 20.85 SS G_CDS: 5.80 Total: 26.66 kcal Atomic # 7 Polarization: 43.61 SS G_CDS: -4.53 Total: 39.07 kcal Atomic # 8 Polarization: 12.63 SS G_CDS: -1.55 Total: 11.08 kcal Atomic # 14 Polarization: -16.35 SS G_CDS: 2.14 Total: -14.21 kcal Total: -83.22 0.68 -82.54 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_16915396.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 185.173 kcal (2) G-P(sol) polarization free energy of solvation -83.217 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 101.956 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.681 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -82.536 kcal (6) G-S(sol) free energy of system = (1) + (5) 102.637 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds