Wall clock time and date at job start Sun Mar 7 2021 06:26:54 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00898 * 109.47578 * 2 1 4 4 C 1.46904 * 109.46810 * 119.99868 * 2 1 3 5 5 C 1.46900 * 109.46727 * 239.99283 * 2 1 3 6 6 C 1.52997 * 109.47126 * 175.00277 * 5 2 1 7 7 H 1.09006 * 112.90863 * 43.74824 * 6 5 2 8 8 C 1.53776 * 113.61979 * 175.00399 * 6 5 2 9 9 C 1.53775 * 87.08487 * 139.98119 * 8 6 5 10 10 H 1.09003 * 113.61313 * 89.20368 * 9 8 6 11 11 N 1.46499 * 113.61262 * 220.01861 * 9 8 6 12 12 C 1.34776 * 119.99941 * 204.99674 * 11 9 8 13 13 O 1.21283 * 120.00254 * 0.02562 * 12 11 9 14 14 C 1.50699 * 120.00405 * 180.02562 * 12 11 9 15 15 O 1.42894 * 109.47579 * 180.02562 * 14 12 11 16 16 C 1.35900 * 117.00366 * 180.02562 * 15 14 12 17 17 C 1.38709 * 120.05786 * 179.97438 * 16 15 14 18 18 C 1.50697 * 120.02724 * 0.04279 * 17 16 15 19 19 O 1.42892 * 109.47482 * 75.00261 * 18 17 16 20 20 Si 1.86305 * 109.46917 * 195.00222 * 18 17 16 21 21 C 1.38171 * 119.94081 * 179.97438 * 17 16 15 22 22 C 1.38245 * 120.05709 * 0.02562 * 21 17 16 23 23 C 1.38285 * 120.11144 * 0.02562 * 22 21 17 24 24 C 1.38120 * 120.05710 * 359.97438 * 23 22 21 25 25 C 1.53780 * 87.08288 * 334.56895 * 9 8 6 26 26 H 1.08998 * 109.47565 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46687 * 300.00774 * 1 2 3 28 28 H 1.09002 * 109.46798 * 59.99719 * 1 2 3 29 29 H 1.09000 * 109.46998 * 179.97438 * 4 2 1 30 30 H 1.08998 * 109.47360 * 299.99266 * 4 2 1 31 31 H 1.08998 * 109.47202 * 59.99599 * 4 2 1 32 32 H 1.09000 * 109.46783 * 55.00686 * 5 2 1 33 33 H 1.08999 * 109.47656 * 295.00614 * 5 2 1 34 34 H 1.09002 * 113.61346 * 25.42748 * 8 6 5 35 35 H 1.09004 * 113.61765 * 254.53613 * 8 6 5 36 36 H 0.97002 * 120.00478 * 25.00498 * 11 9 8 37 37 H 1.09001 * 109.47049 * 59.99786 * 14 12 11 38 38 H 1.08998 * 109.46949 * 300.00530 * 14 12 11 39 39 H 1.09000 * 109.47052 * 314.99564 * 18 17 16 40 40 H 0.96694 * 114.00558 * 59.99375 * 19 18 17 41 41 H 1.48496 * 109.99801 * 180.02562 * 20 18 17 42 42 H 1.48502 * 109.99680 * 301.31575 * 20 18 17 43 43 H 1.08005 * 119.97031 * 180.02562 * 21 17 16 44 44 H 1.08000 * 119.93675 * 180.27435 * 22 21 17 45 45 H 1.07997 * 119.96980 * 179.97438 * 23 22 21 46 46 H 1.08001 * 120.02621 * 180.02562 * 24 23 22 47 47 H 1.08996 * 113.61472 * 139.97563 * 25 9 8 48 48 H 1.08998 * 113.61284 * 270.88731 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6925 1.1995 5 6 1.9586 -0.6927 -1.1994 6 6 3.4834 -0.5848 -1.2639 7 1 3.9625 -0.7630 -0.3011 8 6 4.1091 -1.3824 -2.4202 9 6 5.0666 -0.1953 -2.6168 10 1 5.9792 -0.2678 -2.0251 11 7 5.3245 0.1239 -4.0232 12 6 6.4645 0.7515 -4.3737 13 8 7.2772 1.0517 -3.5249 14 6 6.7295 1.0805 -5.8203 15 8 7.9926 1.7386 -5.9355 16 6 8.3852 2.1064 -7.1835 17 6 9.6000 2.7499 -7.3683 18 6 10.4867 3.0413 -6.1851 19 8 11.1191 1.8342 -5.7551 20 14 11.7865 4.2832 -6.6741 21 6 9.9970 3.1223 -8.6382 22 6 9.1844 2.8546 -9.7241 23 6 7.9724 2.2141 -9.5424 24 6 7.5709 1.8398 -8.2749 25 6 3.9817 0.6849 -1.9742 26 1 -0.3634 -1.0276 0.0005 27 1 -0.3633 0.5140 0.8900 28 1 -0.3633 0.5139 -0.8900 29 1 3.0486 -0.6929 1.1993 30 1 1.5954 -0.1786 2.0895 31 1 1.5952 -1.7201 1.1996 32 1 1.5240 -0.2331 -2.0871 33 1 1.6702 -1.7429 -1.1557 34 1 3.4311 -1.5401 -3.2590 35 1 4.6077 -2.2973 -2.1001 36 1 4.6747 -0.1163 -4.7022 37 1 5.9426 1.7357 -6.1940 38 1 6.7447 0.1608 -6.4051 39 1 9.8852 3.4463 -5.3713 40 1 11.6719 1.4176 -6.4302 41 1 12.6679 4.5785 -5.5160 42 1 12.5930 3.7560 -7.8041 43 1 10.9430 3.6231 -8.7827 44 1 9.4986 3.1426 -10.7165 45 1 7.3392 2.0064 -10.3922 46 1 6.6244 1.3392 -8.1336 47 1 4.3776 1.4389 -1.2939 48 1 3.2689 1.0924 -2.6910 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_2989392.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:54 Heat of formation + Delta-G solvation = 60.256279 kcal Electronic energy + Delta-G solvation = -27050.170704 eV Core-core repulsion = 23191.752102 eV Total energy + Delta-G solvation = -3858.418603 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -42.20968 -41.61623 -40.77381 -39.27603 -38.41801 -37.64705 -34.84142 -32.79818 -31.37949 -30.43167 -29.40524 -29.07665 -26.87755 -26.73926 -25.79686 -24.19020 -23.15650 -22.65347 -21.75729 -20.83272 -19.58996 -19.28913 -18.40136 -18.10965 -17.86167 -17.49836 -17.40267 -16.99953 -16.85196 -16.40884 -16.18750 -16.02450 -15.62892 -15.51660 -15.07420 -14.99011 -14.60012 -14.24008 -13.86580 -13.77311 -13.63022 -13.50215 -13.48410 -13.43863 -13.26913 -13.19428 -13.09080 -12.96347 -12.58607 -12.24943 -12.15518 -11.92106 -11.78578 -11.73541 -11.53293 -11.02850 -10.59471 -10.18392 -10.00967 -9.24954 -5.00548 0.20235 0.38731 1.01601 1.24555 1.36463 1.48540 1.50419 1.88999 2.56059 2.66808 2.91638 2.95886 3.15536 3.37697 3.39995 3.40808 3.53085 3.67276 3.70415 3.76138 3.84693 3.87004 3.94492 4.03525 4.09922 4.15743 4.24522 4.28670 4.33682 4.34602 4.35666 4.49703 4.50277 4.63631 4.65999 4.68901 4.69938 4.78898 4.85196 4.87720 4.93482 4.94243 5.03049 5.13967 5.23809 5.34919 5.47152 5.51177 5.72077 6.24220 6.42192 6.45999 7.08630 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.022779 B = 0.002301 C = 0.002177 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1228.905181 B =12163.420363 C =12857.787762 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.055 4.055 5 C 0.013 3.987 6 C -0.121 4.121 7 H 0.123 0.877 8 C -0.125 4.125 9 C 0.094 3.906 10 H 0.079 0.921 11 N -0.699 5.699 12 C 0.512 3.488 13 O -0.573 6.573 14 C 0.030 3.970 15 O -0.313 6.313 16 C 0.133 3.867 17 C -0.164 4.164 18 C -0.073 4.073 19 O -0.548 6.548 20 Si 0.772 3.228 21 C -0.091 4.091 22 C -0.157 4.157 23 C -0.075 4.075 24 C -0.208 4.208 25 C -0.151 4.151 26 H 0.121 0.879 27 H 0.123 0.877 28 H 0.127 0.873 29 H 0.117 0.883 30 H 0.125 0.875 31 H 0.124 0.876 32 H 0.148 0.852 33 H 0.145 0.855 34 H 0.119 0.881 35 H 0.076 0.924 36 H 0.423 0.577 37 H 0.126 0.874 38 H 0.116 0.884 39 H 0.102 0.898 40 H 0.382 0.618 41 H -0.308 1.308 42 H -0.272 1.272 43 H 0.141 0.859 44 H 0.145 0.855 45 H 0.153 0.847 46 H 0.160 0.840 47 H 0.071 0.929 48 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -33.372 -7.825 15.892 37.782 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.197 4.197 5 C -0.109 4.109 6 C -0.140 4.140 7 H 0.141 0.859 8 C -0.163 4.163 9 C -0.010 4.010 10 H 0.097 0.903 11 N -0.353 5.353 12 C 0.298 3.702 13 O -0.451 6.451 14 C -0.048 4.048 15 O -0.226 6.226 16 C 0.087 3.913 17 C -0.165 4.165 18 C -0.182 4.182 19 O -0.356 6.356 20 Si 0.677 3.323 21 C -0.108 4.108 22 C -0.175 4.175 23 C -0.093 4.093 24 C -0.227 4.227 25 C -0.189 4.189 26 H 0.140 0.860 27 H 0.141 0.859 28 H 0.145 0.855 29 H 0.135 0.865 30 H 0.144 0.856 31 H 0.142 0.858 32 H 0.166 0.834 33 H 0.163 0.837 34 H 0.137 0.863 35 H 0.095 0.905 36 H 0.261 0.739 37 H 0.144 0.856 38 H 0.134 0.866 39 H 0.120 0.880 40 H 0.230 0.770 41 H -0.237 1.237 42 H -0.198 1.198 43 H 0.158 0.842 44 H 0.163 0.837 45 H 0.171 0.829 46 H 0.177 0.823 47 H 0.090 0.910 48 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges -32.282 -7.556 17.150 37.328 hybrid contribution 0.825 -1.019 -0.383 1.366 sum -31.457 -8.575 16.767 36.663 Atomic orbital electron populations 1.24141 0.75272 1.09629 1.09731 1.44819 1.16123 1.19305 1.14678 0.72783 1.24192 1.05589 1.02729 0.87204 1.23898 0.94469 1.03857 0.88708 1.22772 0.93966 0.96724 1.00491 0.85897 1.23341 0.97341 0.96518 0.99120 1.22706 0.98293 0.98628 0.81419 0.90266 1.45645 1.20053 1.59258 1.10384 1.20506 0.82035 0.77522 0.90097 1.90796 1.47357 1.53606 1.53306 1.22801 0.86477 1.00595 0.94930 1.86188 1.36977 1.73147 1.26290 1.18972 0.93649 0.94932 0.83738 1.19668 0.95645 1.05424 0.95782 1.25048 1.01454 0.93459 0.98190 1.86627 1.66141 1.39318 1.43501 0.94135 0.77404 0.84018 0.76711 1.21184 1.00329 0.98167 0.91157 1.21394 0.95302 1.01236 0.99553 1.21402 0.95978 0.94681 0.97220 1.21580 1.02007 1.06831 0.92241 1.23750 0.98124 0.96850 1.00197 0.86023 0.85851 0.85465 0.86453 0.85611 0.85757 0.83391 0.83746 0.86256 0.90494 0.73891 0.85610 0.86640 0.87995 0.76991 1.23692 1.19848 0.84166 0.83718 0.82917 0.82274 0.91038 0.86594 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.97 9.19 127.69 1.17 4.14 16 2 N -0.37 24.64 0.66 -948.83 -0.62 24.01 16 3 H 0.44 -29.75 8.44 -89.70 -0.76 -30.51 16 4 C -0.05 3.43 8.98 127.69 1.15 4.58 16 5 C 0.01 -0.79 4.48 86.30 0.39 -0.40 16 6 C -0.12 6.36 3.57 -10.27 -0.04 6.33 16 7 H 0.12 -6.57 6.10 -2.38 -0.01 -6.58 16 8 C -0.12 5.52 7.39 31.12 0.23 5.75 16 9 C 0.09 -3.23 4.24 45.52 0.19 -3.04 16 10 H 0.08 -1.98 7.46 -2.39 -0.02 -2.00 16 11 N -0.70 21.54 5.35 -440.05 -2.36 19.18 16 12 C 0.51 -9.44 7.91 87.66 0.69 -8.74 16 13 O -0.57 2.97 16.10 16.00 0.26 3.23 16 14 C 0.03 -0.62 5.22 71.24 0.37 -0.25 16 15 O -0.31 2.85 9.00 -73.39 -0.66 2.19 16 16 C 0.13 -1.42 6.66 22.51 0.15 -1.27 16 17 C -0.16 1.50 5.27 -19.77 -0.10 1.39 16 18 C -0.07 0.49 2.38 71.23 0.17 0.66 16 19 O -0.55 1.50 12.88 -148.98 -1.92 -0.42 16 20 Si 0.77 -7.53 30.25 68.60 2.08 -5.45 16 21 C -0.09 1.09 8.66 22.26 0.19 1.29 16 22 C -0.16 2.29 10.04 22.28 0.22 2.51 16 23 C -0.07 1.26 10.04 22.25 0.22 1.49 16 24 C -0.21 3.50 9.04 22.37 0.20 3.71 16 25 C -0.15 6.72 7.43 31.12 0.23 6.95 16 26 H 0.12 -7.74 8.14 -2.39 -0.02 -7.76 16 27 H 0.12 -7.82 8.14 -2.38 -0.02 -7.84 16 28 H 0.13 -8.22 8.11 -2.39 -0.02 -8.24 16 29 H 0.12 -7.12 6.10 -2.39 -0.01 -7.13 16 30 H 0.13 -7.80 8.14 -2.39 -0.02 -7.82 16 31 H 0.12 -7.72 8.11 -2.39 -0.02 -7.74 16 32 H 0.15 -9.58 7.79 -2.39 -0.02 -9.60 16 33 H 0.14 -9.18 8.09 -2.39 -0.02 -9.20 16 34 H 0.12 -5.75 8.08 -2.39 -0.02 -5.76 16 35 H 0.08 -3.09 8.14 -2.39 -0.02 -3.11 16 36 H 0.42 -16.40 8.73 -92.71 -0.81 -17.21 16 37 H 0.13 -3.55 7.66 -2.39 -0.02 -3.57 16 38 H 0.12 -3.00 7.66 -2.39 -0.02 -3.02 16 39 H 0.10 -0.48 7.83 -2.39 -0.02 -0.50 16 40 H 0.38 -3.56 8.70 -74.06 -0.64 -4.20 16 41 H -0.31 0.38 7.11 99.48 0.71 1.09 16 42 H -0.27 2.12 6.68 99.48 0.66 2.78 16 43 H 0.14 -1.97 4.86 -2.91 -0.01 -1.99 16 44 H 0.15 -2.62 8.06 -2.91 -0.02 -2.64 16 45 H 0.15 -3.35 8.06 -2.91 -0.02 -3.37 16 46 H 0.16 -3.89 6.30 -2.91 -0.02 -3.91 16 47 H 0.07 -2.90 8.14 -2.39 -0.02 -2.92 16 48 H 0.12 -5.59 7.90 -2.39 -0.02 -5.61 16 Total: 1.00 -91.48 383.28 0.99 -90.50 By element: Atomic # 1 Polarization: -157.12 SS G_CDS: -1.23 Total: -158.35 kcal Atomic # 6 Polarization: 19.66 SS G_CDS: 5.45 Total: 25.11 kcal Atomic # 7 Polarization: 46.18 SS G_CDS: -2.98 Total: 43.20 kcal Atomic # 8 Polarization: 7.32 SS G_CDS: -2.32 Total: 5.00 kcal Atomic # 14 Polarization: -7.53 SS G_CDS: 2.08 Total: -5.45 kcal Total: -91.48 0.99 -90.50 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_2989392.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 150.751 kcal (2) G-P(sol) polarization free energy of solvation -91.482 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.269 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.987 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.495 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.256 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds