Wall clock time and date at job start Sun Mar 7 2021 06:26:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 H 1.00894 * 109.47191 * 2 1 4 4 C 1.46893 * 109.47135 * 120.00115 * 2 1 3 5 5 C 1.46901 * 109.47012 * 239.99826 * 2 1 3 6 6 C 1.53004 * 109.47094 * 64.99717 * 5 2 1 7 7 H 1.08998 * 112.90937 * 316.25633 * 6 5 2 8 8 C 1.53782 * 113.61022 * 87.50217 * 6 5 2 9 9 C 1.53787 * 87.07831 * 139.98029 * 8 6 5 10 10 H 1.08995 * 113.68620 * 89.13278 * 9 8 6 11 11 N 1.46501 * 113.61220 * 220.01981 * 9 8 6 12 12 C 1.34783 * 119.99886 * 252.49751 * 11 9 8 13 13 O 1.21280 * 119.99862 * 0.02562 * 12 11 9 14 14 C 1.50699 * 120.00035 * 180.02562 * 12 11 9 15 15 O 1.42894 * 109.47024 * 179.97438 * 14 12 11 16 16 C 1.35905 * 117.00217 * 180.02562 * 15 14 12 17 17 C 1.38728 * 120.05539 * 180.02562 * 16 15 14 18 18 C 1.38153 * 119.93918 * 180.02562 * 17 16 15 19 19 C 1.38260 * 120.05718 * 0.02562 * 18 17 16 20 20 C 1.50696 * 119.94431 * 179.97438 * 19 18 17 21 21 O 1.42903 * 109.47278 * 300.00307 * 20 19 18 22 22 Si 1.86300 * 109.47355 * 180.02562 * 20 19 18 23 23 C 1.38268 * 120.11273 * 0.25759 * 19 18 17 24 24 C 1.38148 * 120.05255 * 359.44588 * 23 19 18 25 25 C 1.53774 * 113.61427 * 185.00021 * 6 5 2 26 26 H 1.08999 * 109.47200 * 180.02562 * 1 2 3 27 27 H 1.09004 * 109.46919 * 299.99755 * 1 2 3 28 28 H 1.08994 * 109.47046 * 60.00118 * 1 2 3 29 29 H 1.08996 * 109.47360 * 179.97438 * 4 2 1 30 30 H 1.09004 * 109.47323 * 299.99883 * 4 2 1 31 31 H 1.08999 * 109.47320 * 59.99775 * 4 2 1 32 32 H 1.09005 * 109.46753 * 305.00435 * 5 2 1 33 33 H 1.08995 * 109.47172 * 185.00332 * 5 2 1 34 34 H 1.09006 * 113.61496 * 25.43514 * 8 6 5 35 35 H 1.08992 * 113.61638 * 254.53061 * 8 6 5 36 36 H 0.97000 * 120.00453 * 72.50232 * 11 9 8 37 37 H 1.09003 * 109.46733 * 59.99939 * 14 12 11 38 38 H 1.08997 * 109.47329 * 300.00074 * 14 12 11 39 39 H 1.07999 * 120.03497 * 359.97438 * 17 16 15 40 40 H 1.08000 * 119.96925 * 179.97438 * 18 17 16 41 41 H 1.08997 * 109.47214 * 60.00282 * 20 19 18 42 42 H 0.96700 * 114.00022 * 180.02562 * 21 20 19 43 43 H 1.48506 * 110.00048 * 298.68478 * 22 20 19 44 44 H 1.48502 * 109.99996 * 59.99803 * 22 20 19 45 45 H 1.07998 * 119.97204 * 179.70510 * 23 19 18 46 46 H 1.08006 * 120.02667 * 180.25271 * 24 23 19 47 47 H 1.09003 * 113.61756 * 105.47389 * 25 6 5 48 48 H 1.09006 * 113.69580 * 334.57871 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6925 -1.1994 6 6 1.5538 0.0976 -2.4456 7 1 0.5241 0.4529 -2.4067 8 6 2.5663 1.1855 -2.8409 9 6 2.3144 0.7780 -4.3023 10 1 1.4931 1.3187 -4.7723 11 7 3.5274 0.7596 -5.1237 12 6 3.7294 1.7190 -6.0486 13 8 2.9074 2.5976 -6.2005 14 6 4.9768 1.6998 -6.8940 15 8 4.9602 2.8106 -7.7928 16 6 6.0208 2.9408 -8.6325 17 6 6.0700 3.9966 -9.5310 18 6 7.1491 4.1264 -10.3839 19 6 8.1790 3.2049 -10.3428 20 6 9.3546 3.3487 -11.2746 21 8 8.8987 3.2978 -12.6280 22 14 10.5594 1.9600 -10.9733 23 6 8.1295 2.1485 -9.4522 24 6 7.0556 2.0177 -8.5930 25 6 1.9134 -0.6059 -3.7648 26 1 -0.3633 -1.0276 0.0005 27 1 -0.3633 0.5138 0.8900 28 1 -0.3633 0.5138 -0.8900 29 1 3.0486 -0.6929 1.1992 30 1 1.5954 -0.1787 2.0894 31 1 1.5953 -1.7201 1.1994 32 1 1.5239 -1.6911 -1.2453 33 1 3.0449 -0.7708 -1.1558 34 1 3.5813 0.9821 -2.4996 35 1 2.2344 2.1968 -2.6063 36 1 4.1850 0.0571 -5.0020 37 1 5.0148 0.7718 -7.4645 38 1 5.8535 1.7664 -6.2497 39 1 5.2652 4.7160 -9.5644 40 1 7.1878 4.9480 -11.0839 41 1 9.8476 4.3036 -11.0930 42 1 9.6038 3.3839 -13.2841 43 1 11.0653 2.0202 -9.5784 44 1 9.8990 0.6526 -11.2179 45 1 8.9330 1.4273 -9.4253 46 1 7.0193 1.1945 -7.8947 47 1 1.0545 -1.0408 -4.2760 48 1 2.7498 -1.2995 -3.6776 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:26:59 Heat of formation + Delta-G solvation = 59.401617 kcal Electronic energy + Delta-G solvation = -26379.701827 eV Core-core repulsion = 22521.246163 eV Total energy + Delta-G solvation = -3858.455663 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -42.23138 -41.65848 -40.81290 -39.42950 -38.75462 -37.22987 -34.88915 -32.62385 -31.96854 -30.63862 -29.42290 -29.27677 -26.89787 -26.33011 -25.76234 -24.42709 -23.59346 -22.35139 -21.81004 -20.86869 -19.69081 -19.30684 -18.51397 -18.29432 -17.90692 -17.56022 -17.53252 -17.21230 -16.82093 -16.57107 -16.20916 -15.80738 -15.76178 -15.57975 -15.15555 -14.66842 -14.56993 -14.17597 -13.96339 -13.87883 -13.73121 -13.57404 -13.53016 -13.50386 -13.45435 -13.28501 -13.20983 -12.98941 -12.55211 -12.28362 -12.25966 -12.10005 -11.89982 -11.80241 -11.55392 -11.09979 -10.33109 -10.23821 -10.21492 -9.37160 -4.92963 0.07433 0.12773 1.00113 1.29332 1.29762 1.38407 1.61968 1.92022 2.44996 2.47597 2.89877 2.94239 3.13766 3.32903 3.36878 3.39540 3.47997 3.57928 3.67680 3.69893 3.74310 3.83236 3.87066 3.92237 3.95500 4.09979 4.14039 4.23135 4.27330 4.32688 4.34564 4.37363 4.48317 4.55006 4.64039 4.66978 4.67787 4.76903 4.77152 4.83910 4.86426 4.91509 4.98529 5.01328 5.03506 5.10604 5.33866 5.43320 5.51716 6.09821 6.33706 6.87852 7.01771 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.029944 B = 0.001872 C = 0.001805 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 934.840090 B =14952.908085 C =15507.737424 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.046 4.046 5 C 0.012 3.988 6 C -0.120 4.120 7 H 0.125 0.875 8 C -0.152 4.152 9 C 0.094 3.906 10 H 0.082 0.918 11 N -0.699 5.699 12 C 0.515 3.485 13 O -0.572 6.572 14 C 0.027 3.973 15 O -0.316 6.316 16 C 0.123 3.877 17 C -0.161 4.161 18 C -0.058 4.058 19 C -0.129 4.129 20 C -0.080 4.080 21 O -0.567 6.567 22 Si 0.770 3.230 23 C -0.099 4.099 24 C -0.198 4.198 25 C -0.125 4.125 26 H 0.124 0.876 27 H 0.126 0.874 28 H 0.118 0.882 29 H 0.126 0.874 30 H 0.123 0.877 31 H 0.121 0.879 32 H 0.145 0.855 33 H 0.147 0.853 34 H 0.114 0.886 35 H 0.072 0.928 36 H 0.423 0.577 37 H 0.119 0.881 38 H 0.125 0.875 39 H 0.136 0.864 40 H 0.142 0.858 41 H 0.090 0.910 42 H 0.403 0.597 43 H -0.282 1.282 44 H -0.294 1.294 45 H 0.126 0.874 46 H 0.165 0.835 47 H 0.078 0.922 48 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -11.188 -13.610 32.823 37.253 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.188 4.188 5 C -0.110 4.110 6 C -0.139 4.139 7 H 0.142 0.858 8 C -0.190 4.190 9 C -0.010 4.010 10 H 0.101 0.899 11 N -0.353 5.353 12 C 0.301 3.699 13 O -0.450 6.450 14 C -0.050 4.050 15 O -0.229 6.229 16 C 0.078 3.922 17 C -0.179 4.179 18 C -0.076 4.076 19 C -0.129 4.129 20 C -0.190 4.190 21 O -0.377 6.377 22 Si 0.676 3.324 23 C -0.116 4.116 24 C -0.216 4.216 25 C -0.164 4.164 26 H 0.143 0.857 27 H 0.144 0.856 28 H 0.136 0.864 29 H 0.145 0.855 30 H 0.142 0.858 31 H 0.140 0.860 32 H 0.163 0.837 33 H 0.165 0.835 34 H 0.133 0.867 35 H 0.091 0.909 36 H 0.261 0.739 37 H 0.137 0.863 38 H 0.143 0.857 39 H 0.154 0.846 40 H 0.159 0.841 41 H 0.108 0.892 42 H 0.254 0.746 43 H -0.208 1.208 44 H -0.222 1.222 45 H 0.144 0.856 46 H 0.183 0.817 47 H 0.096 0.904 48 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges -12.427 -13.905 33.500 38.341 hybrid contribution -0.154 0.539 -0.321 0.646 sum -12.581 -13.365 33.179 37.918 Atomic orbital electron populations 1.24197 0.76409 1.09740 1.09362 1.44819 1.15848 1.19494 1.14780 0.72799 1.24137 1.05774 1.02401 0.86475 1.23901 1.06021 0.99508 0.81552 1.22770 1.01396 0.96380 0.93316 0.85751 1.23758 1.01273 0.99821 0.94180 1.22740 0.87291 1.00131 0.90882 0.89933 1.45662 1.24286 1.28578 1.36768 1.20402 0.86944 0.81954 0.80607 1.90782 1.47162 1.37982 1.69101 1.22854 0.98361 0.90721 0.93088 1.86132 1.40890 1.47825 1.48054 1.19074 0.86871 0.95211 0.91037 1.20716 1.00727 0.99101 0.97377 1.20996 0.91594 0.98600 0.96440 1.19687 0.97796 0.96799 0.98650 1.24844 0.99383 1.10782 0.83969 1.86437 1.39732 1.96898 1.14659 0.94082 0.82059 0.74325 0.81977 1.20884 0.98162 0.96588 0.95993 1.21386 0.94564 1.01773 1.03911 1.23344 1.03443 0.94988 0.94597 0.85750 0.85601 0.86378 0.85543 0.85809 0.86011 0.83729 0.83504 0.86732 0.90921 0.73894 0.86345 0.85690 0.84608 0.84062 0.89203 0.74630 1.20845 1.22194 0.85639 0.81729 0.90359 0.86373 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.45 8.98 127.69 1.15 4.59 16 2 N -0.37 24.67 0.66 -948.85 -0.62 24.05 16 3 H 0.44 -29.76 8.44 -89.70 -0.76 -30.52 16 4 C -0.05 2.97 9.19 127.69 1.17 4.15 16 5 C 0.01 -0.76 4.48 86.30 0.39 -0.37 16 6 C -0.12 6.35 3.58 -10.27 -0.04 6.32 16 7 H 0.12 -6.71 6.10 -2.39 -0.01 -6.72 16 8 C -0.15 6.81 7.43 31.12 0.23 7.04 16 9 C 0.09 -3.28 4.24 45.52 0.19 -3.08 16 10 H 0.08 -2.16 7.46 -2.39 -0.02 -2.17 16 11 N -0.70 21.70 5.36 -440.03 -2.36 19.35 16 12 C 0.52 -9.75 7.91 87.66 0.69 -9.06 16 13 O -0.57 3.72 16.10 16.01 0.26 3.97 16 14 C 0.03 -0.57 5.22 71.24 0.37 -0.20 16 15 O -0.32 2.83 9.67 -73.44 -0.71 2.12 16 16 C 0.12 -1.05 6.69 22.50 0.15 -0.90 16 17 C -0.16 1.01 9.99 22.37 0.22 1.23 16 18 C -0.06 0.38 9.60 22.25 0.21 0.59 16 19 C -0.13 0.90 5.42 -19.85 -0.11 0.79 16 20 C -0.08 0.91 2.81 71.23 0.20 1.11 16 21 O -0.57 5.75 12.74 -148.98 -1.90 3.86 16 22 Si 0.77 -10.56 29.78 68.60 2.04 -8.51 16 23 C -0.10 0.87 8.66 22.26 0.19 1.06 16 24 C -0.20 2.42 9.04 22.37 0.20 2.63 16 25 C -0.13 5.58 7.39 31.12 0.23 5.81 16 26 H 0.12 -7.75 8.11 -2.39 -0.02 -7.77 16 27 H 0.13 -7.83 8.14 -2.39 -0.02 -7.85 16 28 H 0.12 -7.21 6.10 -2.39 -0.01 -7.23 16 29 H 0.13 -8.15 8.11 -2.39 -0.02 -8.17 16 30 H 0.12 -7.85 8.14 -2.39 -0.02 -7.86 16 31 H 0.12 -7.74 8.14 -2.39 -0.02 -7.76 16 32 H 0.14 -9.20 8.09 -2.38 -0.02 -9.22 16 33 H 0.15 -9.48 7.79 -2.39 -0.02 -9.50 16 34 H 0.11 -5.51 7.90 -2.38 -0.02 -5.53 16 35 H 0.07 -2.98 8.14 -2.39 -0.02 -3.00 16 36 H 0.42 -16.37 8.73 -92.71 -0.81 -17.18 16 37 H 0.12 -3.04 7.66 -2.39 -0.02 -3.06 16 38 H 0.13 -3.42 7.67 -2.39 -0.02 -3.43 16 39 H 0.14 -0.98 8.06 -2.91 -0.02 -1.00 16 40 H 0.14 -1.20 8.06 -2.91 -0.02 -1.23 16 41 H 0.09 -1.33 7.96 -2.39 -0.02 -1.35 16 42 H 0.40 -8.12 8.74 -74.06 -0.65 -8.77 16 43 H -0.28 2.74 7.11 99.48 0.71 3.45 16 44 H -0.29 1.99 7.11 99.48 0.71 2.70 16 45 H 0.13 -1.33 4.87 -2.91 -0.01 -1.34 16 46 H 0.17 -3.43 6.30 -2.91 -0.02 -3.45 16 47 H 0.08 -3.18 8.14 -2.39 -0.02 -3.20 16 48 H 0.12 -5.69 8.08 -2.38 -0.02 -5.71 16 Total: 1.00 -91.32 384.08 0.98 -90.33 By element: Atomic # 1 Polarization: -155.70 SS G_CDS: -1.19 Total: -156.90 kcal Atomic # 6 Polarization: 16.27 SS G_CDS: 5.46 Total: 21.73 kcal Atomic # 7 Polarization: 46.37 SS G_CDS: -2.98 Total: 43.39 kcal Atomic # 8 Polarization: 12.30 SS G_CDS: -2.35 Total: 9.95 kcal Atomic # 14 Polarization: -10.56 SS G_CDS: 2.04 Total: -8.51 kcal Total: -91.32 0.98 -90.33 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 149.735 kcal (2) G-P(sol) polarization free energy of solvation -91.316 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.419 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.983 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.333 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.402 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds