Wall clock time and date at job start Sun Mar 7 2021 06:27:03 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00901 * 109.47215 * 2 1 4 4 C 1.46902 * 109.46688 * 240.00130 * 2 1 3 5 5 C 1.46901 * 109.47230 * 120.00743 * 2 1 3 6 6 C 1.52998 * 109.46683 * 184.99843 * 5 2 1 7 7 H 1.08990 * 112.85610 * 43.80145 * 6 5 2 8 8 C 1.53791 * 113.61063 * 175.00176 * 6 5 2 9 9 C 1.53779 * 87.08248 * 139.97997 * 8 6 5 10 10 H 1.08994 * 113.61785 * 89.11476 * 9 8 6 11 11 N 1.46504 * 113.61019 * 219.93330 * 9 8 6 12 12 C 1.34774 * 119.99590 * 204.99389 * 11 9 8 13 13 O 1.21285 * 120.00340 * 0.02562 * 12 11 9 14 14 C 1.50706 * 119.99814 * 179.97438 * 12 11 9 15 15 C 1.52998 * 109.46954 * 180.02562 * 14 12 11 16 16 O 1.42899 * 109.46913 * 180.02562 * 15 14 12 17 17 C 1.35906 * 117.00196 * 180.02562 * 16 15 14 18 18 C 1.38731 * 120.05095 * 359.73082 * 17 16 15 19 19 C 1.38149 * 119.93828 * 179.70191 * 18 17 16 20 20 C 1.38265 * 120.05689 * 0.58891 * 19 18 17 21 21 C 1.50700 * 119.94301 * 179.70521 * 20 19 18 22 22 O 1.42899 * 109.47072 * 119.98208 * 21 20 19 23 23 Si 1.86295 * 109.47319 * 359.97438 * 21 20 19 24 24 C 1.38260 * 120.11221 * 359.68545 * 20 19 18 25 25 C 1.38150 * 120.05582 * 0.02562 * 24 20 19 26 26 C 1.53781 * 87.08140 * 334.56433 * 9 8 6 27 27 H 1.09002 * 109.47742 * 179.97438 * 1 2 3 28 28 H 1.09004 * 109.46736 * 299.99613 * 1 2 3 29 29 H 1.09000 * 109.47357 * 59.99578 * 1 2 3 30 30 H 1.09001 * 109.47165 * 179.97438 * 4 2 1 31 31 H 1.08992 * 109.47412 * 300.00019 * 4 2 1 32 32 H 1.09004 * 109.46739 * 60.00523 * 4 2 1 33 33 H 1.08995 * 109.46814 * 304.99109 * 5 2 1 34 34 H 1.08993 * 109.46905 * 64.99501 * 5 2 1 35 35 H 1.09001 * 113.60623 * 254.52750 * 8 6 5 36 36 H 1.08996 * 113.61696 * 25.42583 * 8 6 5 37 37 H 0.96997 * 119.99809 * 24.99991 * 11 9 8 38 38 H 1.09000 * 109.47075 * 300.00440 * 14 12 11 39 39 H 1.09003 * 109.46928 * 60.00118 * 14 12 11 40 40 H 1.09000 * 109.47339 * 299.99973 * 15 14 12 41 41 H 1.09007 * 109.47213 * 60.00566 * 15 14 12 42 42 H 1.07996 * 120.03334 * 359.97438 * 18 17 16 43 43 H 1.08001 * 119.97233 * 180.31900 * 19 18 17 44 44 H 1.09008 * 109.46930 * 239.97629 * 21 20 19 45 45 H 0.96699 * 114.00195 * 299.99411 * 22 21 20 46 46 H 1.48505 * 110.00118 * 180.02562 * 23 21 20 47 47 H 1.48504 * 110.00107 * 301.32312 * 23 21 20 48 48 H 1.07995 * 119.97624 * 180.02562 * 24 20 19 49 49 H 1.08008 * 120.02949 * 180.02562 * 25 24 20 50 50 H 1.08997 * 113.61644 * 270.88666 * 26 9 8 51 51 H 1.09001 * 113.61420 * 139.98339 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9585 -0.6925 -1.1995 5 6 1.9587 -0.6926 1.1993 6 6 3.4835 -0.5847 1.2637 7 1 3.8473 0.4154 1.0284 8 6 4.0891 -1.1741 2.5485 9 6 5.2160 -1.7361 1.6659 10 1 6.0545 -1.0513 1.5398 11 7 5.6371 -3.0880 2.0419 12 6 6.8794 -3.5149 1.7410 13 8 7.6490 -2.7798 1.1592 14 6 7.3128 -4.9054 2.1283 15 6 8.7556 -5.1350 1.6739 16 8 9.1663 -6.4536 2.0406 17 6 10.4320 -6.8205 1.7082 18 6 11.2596 -5.9316 1.0377 19 6 12.5478 -6.3048 0.7063 20 6 13.0084 -7.5672 1.0315 21 6 14.4118 -7.9740 0.6629 22 8 15.1393 -8.3026 1.8482 23 14 15.2570 -6.5642 -0.2138 24 6 12.1836 -8.4570 1.6947 25 6 10.8966 -8.0866 2.0336 26 6 4.2130 -1.7030 0.5007 27 1 -0.3634 -1.0276 -0.0005 28 1 -0.3633 0.5138 0.8901 29 1 -0.3634 0.5139 -0.8899 30 1 3.0485 -0.6921 -1.1998 31 1 1.5952 -1.7201 -1.1995 32 1 1.5952 -0.1785 -2.0894 33 1 1.5242 -0.2331 2.0871 34 1 1.6702 -1.7428 1.1556 35 1 4.4260 -0.4189 3.2586 36 1 3.4704 -1.9440 3.0096 37 1 5.0216 -3.6757 2.5074 38 1 7.2510 -5.0169 3.2108 39 1 6.6602 -5.6358 1.6499 40 1 8.8178 -5.0233 0.5914 41 1 9.4079 -4.4045 2.1526 42 1 10.8987 -4.9471 0.7789 43 1 13.1942 -5.6113 0.1890 44 1 14.3775 -8.8426 0.0052 45 1 15.2101 -7.5747 2.4808 46 1 16.6418 -6.9529 -0.5832 47 1 14.4925 -6.1919 -1.4314 48 1 12.5457 -9.4424 1.9480 49 1 10.2528 -8.7818 2.5520 50 1 3.6282 -2.6175 0.4019 51 1 4.6500 -1.3749 -0.4424 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:03 Heat of formation + Delta-G solvation = 48.921933 kcal Electronic energy + Delta-G solvation = -28104.183752 eV Core-core repulsion = 24089.736036 eV Total energy + Delta-G solvation = -4014.447716 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.201 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -42.24307 -41.41821 -40.86794 -39.35890 -38.94469 -37.20813 -34.75565 -33.33533 -32.07812 -31.47369 -30.08149 -29.50069 -26.86367 -26.67503 -26.03620 -25.37532 -23.95560 -23.12890 -22.22278 -21.56891 -20.87439 -19.54903 -19.08977 -18.38910 -18.05487 -17.73992 -17.51601 -17.44121 -17.08599 -16.70072 -16.44754 -16.11410 -16.05363 -15.86169 -15.64190 -14.85611 -14.76138 -14.65596 -14.48487 -14.31742 -14.01703 -13.92091 -13.58222 -13.56902 -13.52012 -13.40858 -13.29347 -13.09430 -12.94890 -12.89703 -12.77325 -12.32080 -12.23530 -12.07985 -11.82940 -11.78488 -11.72778 -11.49687 -11.05226 -10.45678 -10.09637 -10.08268 -9.25076 -5.05346 0.24068 0.26407 1.03343 1.28727 1.46776 1.57349 1.70243 1.92735 2.47200 2.62109 2.90009 2.97037 3.21523 3.35037 3.47071 3.50766 3.53772 3.67850 3.72031 3.75992 3.79427 3.86072 3.88137 3.95995 4.02751 4.15675 4.21027 4.22307 4.30072 4.33579 4.39741 4.41140 4.46662 4.48147 4.61723 4.64787 4.68209 4.71224 4.74786 4.75545 4.77375 4.84542 4.88325 4.93492 4.94643 5.06179 5.13496 5.19328 5.23690 5.46665 5.52578 5.67449 6.28213 6.42561 6.75144 7.13544 Molecular weight = 336.20amu Principal moments of inertia in cm(-1) A = 0.027627 B = 0.001605 C = 0.001565 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1013.275942 B =17440.741009 C =17881.996272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.370 5.370 3 H 0.438 0.562 4 C -0.057 4.057 5 C 0.012 3.988 6 C -0.117 4.117 7 H 0.125 0.875 8 C -0.128 4.128 9 C 0.094 3.906 10 H 0.085 0.915 11 N -0.706 5.706 12 C 0.521 3.479 13 O -0.584 6.584 14 C -0.136 4.136 15 C 0.069 3.931 16 O -0.322 6.322 17 C 0.124 3.876 18 C -0.207 4.207 19 C -0.081 4.081 20 C -0.161 4.161 21 C -0.068 4.068 22 O -0.557 6.557 23 Si 0.772 3.228 24 C -0.062 4.062 25 C -0.159 4.159 26 C -0.152 4.152 27 H 0.119 0.881 28 H 0.127 0.873 29 H 0.123 0.877 30 H 0.115 0.885 31 H 0.122 0.878 32 H 0.125 0.875 33 H 0.149 0.851 34 H 0.140 0.860 35 H 0.077 0.923 36 H 0.114 0.886 37 H 0.420 0.580 38 H 0.123 0.877 39 H 0.127 0.873 40 H 0.064 0.936 41 H 0.064 0.936 42 H 0.144 0.856 43 H 0.144 0.856 44 H 0.105 0.895 45 H 0.395 0.605 46 H -0.303 1.303 47 H -0.285 1.285 48 H 0.136 0.864 49 H 0.141 0.859 50 H 0.111 0.889 51 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -38.763 22.221 -1.904 44.721 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.199 4.199 5 C -0.110 4.110 6 C -0.136 4.136 7 H 0.143 0.857 8 C -0.167 4.167 9 C -0.011 4.011 10 H 0.103 0.897 11 N -0.358 5.358 12 C 0.308 3.692 13 O -0.464 6.464 14 C -0.176 4.176 15 C -0.006 4.006 16 O -0.236 6.236 17 C 0.079 3.921 18 C -0.225 4.225 19 C -0.098 4.098 20 C -0.162 4.162 21 C -0.179 4.179 22 O -0.365 6.365 23 Si 0.679 3.321 24 C -0.080 4.080 25 C -0.177 4.177 26 C -0.191 4.191 27 H 0.138 0.862 28 H 0.146 0.854 29 H 0.142 0.858 30 H 0.133 0.867 31 H 0.140 0.860 32 H 0.144 0.856 33 H 0.167 0.833 34 H 0.158 0.842 35 H 0.095 0.905 36 H 0.132 0.868 37 H 0.258 0.742 38 H 0.141 0.859 39 H 0.145 0.855 40 H 0.083 0.917 41 H 0.083 0.917 42 H 0.161 0.839 43 H 0.161 0.839 44 H 0.123 0.877 45 H 0.245 0.755 46 H -0.231 1.231 47 H -0.212 1.212 48 H 0.154 0.846 49 H 0.159 0.841 50 H 0.130 0.870 51 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -38.069 22.089 -3.231 44.132 hybrid contribution 0.246 -0.560 -0.033 0.613 sum -37.823 21.529 -3.264 43.643 Atomic orbital electron populations 1.24128 0.75406 1.09521 1.09743 1.44842 1.16021 1.19300 1.14518 0.72495 1.24269 1.05556 1.02698 0.87417 1.23896 0.94823 1.03645 0.88635 1.22699 0.92799 1.00726 0.97415 0.85723 1.23332 0.95702 1.01228 0.96410 1.22696 0.96681 0.83533 0.98139 0.89681 1.45824 1.13728 1.16475 1.59761 1.20535 0.82303 0.88604 0.77748 1.90759 1.54118 1.58264 1.43273 1.21474 0.95419 0.94836 1.05874 1.22510 0.96252 0.81399 1.00484 1.85962 1.27144 1.33840 1.76608 1.19115 0.84013 0.94036 0.94926 1.21404 0.95391 1.01137 1.04589 1.21008 0.95542 0.95273 0.97977 1.20315 0.97331 0.95140 1.03412 1.25066 0.90986 1.08868 0.92938 1.86468 1.75114 1.43659 1.31251 0.93823 0.75352 0.82150 0.80822 1.20964 0.92027 0.99732 0.95253 1.20660 0.96942 0.94993 1.05109 1.23854 0.97470 0.99990 0.97737 0.86221 0.85441 0.85832 0.86689 0.85967 0.85615 0.83324 0.84226 0.90469 0.86795 0.74220 0.85855 0.85523 0.91743 0.91730 0.83873 0.83884 0.87738 0.75537 1.23122 1.21213 0.84634 0.84083 0.87047 0.90511 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.99 9.19 127.69 1.17 4.17 16 2 N -0.37 24.69 0.66 -948.86 -0.62 24.07 16 3 H 0.44 -30.64 8.41 -89.69 -0.75 -31.39 16 4 C -0.06 3.55 8.57 127.69 1.09 4.65 16 5 C 0.01 -0.75 4.57 86.30 0.39 -0.36 16 6 C -0.12 6.34 3.31 -10.26 -0.03 6.30 16 7 H 0.12 -6.87 8.09 -2.39 -0.02 -6.89 16 8 C -0.13 5.81 7.39 31.12 0.23 6.04 16 9 C 0.09 -3.46 4.24 45.52 0.19 -3.27 16 10 H 0.09 -2.44 7.46 -2.39 -0.02 -2.46 16 11 N -0.71 23.25 5.36 -440.03 -2.36 20.90 16 12 C 0.52 -12.14 7.83 87.66 0.69 -11.45 16 13 O -0.58 7.82 15.58 -3.04 -0.05 7.77 16 14 C -0.14 3.36 6.07 29.85 0.18 3.54 16 15 C 0.07 -1.16 4.03 71.98 0.29 -0.87 16 16 O -0.32 3.93 10.14 -92.50 -0.94 3.00 16 17 C 0.12 -1.21 6.69 22.51 0.15 -1.05 16 18 C -0.21 2.26 9.04 22.37 0.20 2.46 16 19 C -0.08 0.89 8.66 22.25 0.19 1.09 16 20 C -0.16 1.53 5.39 -19.85 -0.11 1.42 16 21 C -0.07 0.64 2.82 71.24 0.20 0.85 16 22 O -0.56 4.70 12.77 -148.98 -1.90 2.80 16 23 Si 0.77 -8.40 29.78 68.60 2.04 -6.36 16 24 C -0.06 0.55 9.60 22.25 0.21 0.76 16 25 C -0.16 1.49 9.99 22.37 0.22 1.71 16 26 C -0.15 7.07 5.69 31.12 0.18 7.24 16 27 H 0.12 -7.62 8.14 -2.39 -0.02 -7.64 16 28 H 0.13 -8.26 8.11 -2.38 -0.02 -8.28 16 29 H 0.12 -7.87 8.14 -2.39 -0.02 -7.89 16 30 H 0.11 -6.83 5.13 -2.39 -0.01 -6.84 16 31 H 0.12 -7.57 8.11 -2.39 -0.02 -7.59 16 32 H 0.13 -7.81 8.14 -2.39 -0.02 -7.83 16 33 H 0.15 -9.62 8.09 -2.39 -0.02 -9.64 16 34 H 0.14 -8.91 7.79 -2.39 -0.02 -8.93 16 35 H 0.08 -3.19 8.14 -2.39 -0.02 -3.21 16 36 H 0.11 -5.48 8.08 -2.39 -0.02 -5.50 16 37 H 0.42 -16.41 8.73 -92.71 -0.81 -17.21 16 38 H 0.12 -3.37 8.14 -2.39 -0.02 -3.39 16 39 H 0.13 -3.60 8.14 -2.39 -0.02 -3.62 16 40 H 0.06 -1.00 7.61 -2.39 -0.02 -1.02 16 41 H 0.06 -0.98 7.63 -2.38 -0.02 -1.00 16 42 H 0.14 -1.98 6.30 -2.91 -0.02 -2.00 16 43 H 0.14 -2.12 4.87 -2.91 -0.01 -2.14 16 44 H 0.11 -0.85 7.96 -2.38 -0.02 -0.87 16 45 H 0.39 -6.49 8.70 -74.06 -0.64 -7.14 16 46 H -0.30 0.78 7.11 99.48 0.71 1.49 16 47 H -0.29 1.91 7.11 99.48 0.71 2.62 16 48 H 0.14 -1.33 8.06 -2.91 -0.02 -1.36 16 49 H 0.14 -1.67 8.06 -2.91 -0.02 -1.70 16 50 H 0.11 -5.47 7.90 -2.39 -0.02 -5.48 16 51 H 0.08 -3.35 7.18 -2.39 -0.02 -3.37 16 Total: 1.00 -85.29 402.70 0.41 -84.88 By element: Atomic # 1 Polarization: -159.05 SS G_CDS: -1.23 Total: -160.27 kcal Atomic # 6 Polarization: 17.76 SS G_CDS: 5.46 Total: 23.23 kcal Atomic # 7 Polarization: 47.94 SS G_CDS: -2.98 Total: 44.96 kcal Atomic # 8 Polarization: 16.45 SS G_CDS: -2.89 Total: 13.57 kcal Atomic # 14 Polarization: -8.40 SS G_CDS: 2.04 Total: -6.36 kcal Total: -85.29 0.41 -84.88 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 133.804 kcal (2) G-P(sol) polarization free energy of solvation -85.293 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.511 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.411 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.882 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.922 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds