Wall clock time and date at job start Sun Mar 7 2021 06:27:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00897 * 109.47121 * 2 1 4 4 C 1.46899 * 109.47037 * 119.99949 * 2 1 3 5 5 C 1.46906 * 109.47040 * 239.99556 * 2 1 3 6 6 C 1.53002 * 109.46884 * 65.00194 * 5 2 1 7 7 H 1.09001 * 112.90686 * 316.25061 * 6 5 2 8 8 C 1.53952 * 113.66518 * 87.44019 * 6 5 2 9 9 C 1.53777 * 87.02222 * 139.93348 * 8 6 5 10 10 H 1.08995 * 113.61682 * 89.22274 * 9 8 6 11 11 N 1.46497 * 113.61963 * 220.05050 * 9 8 6 12 12 C 1.34778 * 120.00043 * 254.13679 * 11 9 8 13 13 O 1.21280 * 119.99718 * 359.97438 * 12 11 9 14 14 C 1.50696 * 119.99948 * 179.97438 * 12 11 9 15 15 C 1.52998 * 109.47203 * 179.97438 * 14 12 11 16 16 C 1.52997 * 109.47622 * 180.02562 * 15 14 12 17 17 O 1.42892 * 109.47378 * 180.02562 * 16 15 14 18 18 C 1.35908 * 116.99907 * 180.02562 * 17 16 15 19 19 C 1.38706 * 120.05344 * 179.97438 * 18 17 16 20 20 C 1.38166 * 119.94172 * 180.02562 * 19 18 17 21 21 C 1.50701 * 119.97212 * 179.97438 * 20 19 18 22 22 O 1.42902 * 109.46980 * 299.99951 * 21 20 19 23 23 Si 1.86295 * 109.47294 * 180.02562 * 21 20 19 24 24 C 1.38243 * 120.05887 * 359.74301 * 20 19 18 25 25 C 1.38288 * 120.10724 * 0.51419 * 24 20 19 26 26 C 1.38126 * 120.05386 * 359.48327 * 25 24 20 27 27 C 1.53778 * 113.61251 * 184.99915 * 6 5 2 28 28 H 1.09000 * 109.47200 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.47018 * 300.00467 * 1 2 3 30 30 H 1.08998 * 109.46844 * 60.00171 * 1 2 3 31 31 H 1.09005 * 109.47110 * 179.97438 * 4 2 1 32 32 H 1.09003 * 109.47158 * 300.00053 * 4 2 1 33 33 H 1.09000 * 109.47134 * 59.99949 * 4 2 1 34 34 H 1.08998 * 109.47174 * 305.00598 * 5 2 1 35 35 H 1.08998 * 109.47101 * 185.00252 * 5 2 1 36 36 H 1.08995 * 113.61488 * 25.40850 * 8 6 5 37 37 H 1.09005 * 113.66953 * 254.46120 * 8 6 5 38 38 H 0.97000 * 120.00143 * 74.12447 * 11 9 8 39 39 H 1.08998 * 109.47418 * 59.99393 * 14 12 11 40 40 H 1.09000 * 109.47278 * 299.99719 * 14 12 11 41 41 H 1.09006 * 109.47165 * 59.99744 * 15 14 12 42 42 H 1.09000 * 109.46881 * 300.00093 * 15 14 12 43 43 H 1.08998 * 109.47238 * 59.99379 * 16 15 14 44 44 H 1.09009 * 109.46444 * 299.99989 * 16 15 14 45 45 H 1.08006 * 120.02940 * 0.03663 * 19 18 17 46 46 H 1.08997 * 109.47272 * 59.99834 * 21 20 19 47 47 H 0.96705 * 114.00195 * 299.99788 * 22 21 20 48 48 H 1.48497 * 110.00541 * 58.67787 * 23 21 20 49 49 H 1.48503 * 110.00248 * 180.02562 * 23 21 20 50 50 H 1.07993 * 119.94940 * 180.25047 * 24 20 19 51 51 H 1.08002 * 119.97454 * 179.76977 * 25 24 20 52 52 H 1.07999 * 120.02655 * 180.23520 * 26 25 24 53 53 H 1.08998 * 113.61054 * 105.47432 * 27 6 5 54 54 H 1.09000 * 113.61661 * 334.56795 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6926 -1.1994 6 6 1.5539 0.0975 -2.4455 7 1 0.5242 0.4528 -2.4067 8 6 2.5660 1.1880 -2.8416 9 6 2.3146 0.7780 -4.3022 10 1 1.4932 1.3186 -4.7723 11 7 3.5274 0.7596 -5.1237 12 6 3.7443 1.7360 -6.0271 13 8 2.9352 2.6295 -6.1602 14 6 4.9922 1.7173 -6.8718 15 6 4.9927 2.9276 -7.8077 16 6 6.2592 2.9084 -8.6658 17 8 6.2599 4.0391 -9.5395 18 6 7.3230 4.1721 -10.3756 19 6 7.3883 5.2462 -11.2509 20 6 8.4699 5.3788 -12.1003 21 6 8.5412 6.5451 -13.0520 22 8 7.4142 6.5131 -13.9300 23 14 10.1095 6.4361 -14.0515 24 6 9.4891 4.4452 -12.0747 25 6 9.4238 3.3706 -11.2066 26 6 8.3447 3.2336 -10.3555 27 6 1.9136 -0.6060 -3.7648 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5139 0.8899 30 1 -0.3633 0.5138 -0.8900 31 1 3.0487 -0.6929 1.1992 32 1 1.5953 -0.1786 2.0894 33 1 1.5953 -1.7201 1.1994 34 1 1.5240 -1.6911 -1.2453 35 1 3.0450 -0.7709 -1.1558 36 1 3.5812 0.9863 -2.4999 37 1 2.2331 2.1994 -2.6085 38 1 4.1745 0.0448 -5.0174 39 1 5.0175 0.8016 -7.4624 40 1 5.8690 1.7571 -6.2255 41 1 4.9671 3.8436 -7.2173 42 1 4.1158 2.8874 -8.4540 43 1 6.2843 1.9925 -9.2561 44 1 7.1363 2.9484 -8.0197 45 1 6.5944 5.9782 -11.2684 46 1 8.5346 7.4767 -12.4862 47 1 7.3560 5.7104 -14.4662 48 1 10.1450 5.1559 -14.8031 49 1 10.1921 7.5811 -14.9936 50 1 10.3356 4.5528 -12.7365 51 1 10.2195 2.6405 -11.1910 52 1 8.2960 2.3962 -9.6751 53 1 1.0547 -1.0408 -4.2760 54 1 2.7501 -1.2992 -3.6761 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4549616.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:13 Heat of formation + Delta-G solvation = 42.022268 kcal Electronic energy + Delta-G solvation = -29541.946396 eV Core-core repulsion = 25371.661869 eV Total energy + Delta-G solvation = -4170.284527 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.216 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -42.18191 -41.32682 -40.92357 -39.34999 -39.06028 -37.45275 -34.96013 -34.62030 -32.49526 -31.30232 -30.20670 -29.40361 -28.34680 -26.89796 -26.86192 -25.77121 -24.22289 -23.69737 -22.95460 -21.89063 -21.53244 -20.73203 -19.30754 -19.25344 -18.16746 -17.99133 -17.87281 -17.50137 -17.38831 -17.18413 -16.90367 -16.60898 -16.45147 -16.21927 -16.11647 -15.55207 -15.12546 -14.94993 -14.78199 -14.41823 -14.27792 -14.14330 -13.86394 -13.60349 -13.49964 -13.45823 -13.38048 -13.34929 -13.23819 -13.14094 -13.11171 -12.90737 -12.76656 -12.36900 -12.31701 -12.20922 -11.98654 -11.77204 -11.64694 -11.58926 -11.51152 -10.96240 -10.72072 -10.08382 -9.94556 -9.27055 -4.94556 0.19214 0.38755 1.01566 1.26407 1.55195 1.58422 1.89239 1.98233 2.37312 2.65535 2.91785 2.96031 3.15899 3.36244 3.38834 3.42830 3.59309 3.64068 3.72518 3.76594 3.82510 3.84198 3.85633 3.94625 4.08709 4.14474 4.19289 4.23458 4.25210 4.31001 4.35111 4.35928 4.37919 4.43374 4.49635 4.52938 4.60720 4.65390 4.66860 4.70099 4.72403 4.79316 4.86282 4.87619 4.94995 4.96439 4.96858 5.03808 5.11408 5.21869 5.26221 5.36612 5.43843 5.54959 5.72037 6.40601 6.42306 6.49456 7.22477 Molecular weight = 350.22amu Principal moments of inertia in cm(-1) A = 0.035857 B = 0.001261 C = 0.001245 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 780.699370 B =22202.529011 C =22490.079322 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.435 0.565 4 C -0.047 4.047 5 C 0.013 3.987 6 C -0.121 4.121 7 H 0.123 0.877 8 C -0.152 4.152 9 C 0.093 3.907 10 H 0.078 0.922 11 N -0.709 5.709 12 C 0.509 3.491 13 O -0.592 6.592 14 C -0.130 4.130 15 C -0.103 4.103 16 C 0.055 3.945 17 O -0.340 6.340 18 C 0.117 3.883 19 C -0.152 4.152 20 C -0.082 4.082 21 C -0.090 4.090 22 O -0.551 6.551 23 Si 0.778 3.222 24 C -0.161 4.161 25 C -0.073 4.073 26 C -0.203 4.203 27 C -0.125 4.125 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.117 0.883 31 H 0.127 0.873 32 H 0.123 0.877 33 H 0.121 0.879 34 H 0.144 0.856 35 H 0.147 0.853 36 H 0.113 0.887 37 H 0.069 0.931 38 H 0.420 0.580 39 H 0.124 0.876 40 H 0.130 0.870 41 H 0.060 0.940 42 H 0.054 0.946 43 H 0.080 0.920 44 H 0.086 0.914 45 H 0.115 0.885 46 H 0.122 0.878 47 H 0.386 0.614 48 H -0.279 1.279 49 H -0.307 1.307 50 H 0.146 0.854 51 H 0.159 0.841 52 H 0.156 0.844 53 H 0.076 0.924 54 H 0.117 0.883 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -12.019 -22.426 40.374 47.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.189 4.189 5 C -0.109 4.109 6 C -0.140 4.140 7 H 0.140 0.860 8 C -0.190 4.190 9 C -0.012 4.012 10 H 0.096 0.904 11 N -0.361 5.361 12 C 0.297 3.703 13 O -0.472 6.472 14 C -0.170 4.170 15 C -0.141 4.141 16 C -0.019 4.019 17 O -0.254 6.254 18 C 0.072 3.928 19 C -0.171 4.171 20 C -0.083 4.083 21 C -0.198 4.198 22 O -0.359 6.359 23 Si 0.683 3.317 24 C -0.178 4.178 25 C -0.091 4.091 26 C -0.222 4.222 27 C -0.164 4.164 28 H 0.142 0.858 29 H 0.144 0.856 30 H 0.136 0.864 31 H 0.145 0.855 32 H 0.142 0.858 33 H 0.140 0.860 34 H 0.162 0.838 35 H 0.165 0.835 36 H 0.131 0.869 37 H 0.088 0.912 38 H 0.258 0.742 39 H 0.142 0.858 40 H 0.148 0.852 41 H 0.079 0.921 42 H 0.073 0.927 43 H 0.099 0.901 44 H 0.104 0.896 45 H 0.133 0.867 46 H 0.139 0.861 47 H 0.235 0.765 48 H -0.205 1.205 49 H -0.236 1.236 50 H 0.163 0.837 51 H 0.177 0.823 52 H 0.174 0.826 53 H 0.094 0.906 54 H 0.135 0.865 Dipole moment (debyes) X Y Z Total from point charges -12.632 -21.456 39.820 46.963 hybrid contribution -1.039 0.012 -1.060 1.484 sum -13.670 -21.444 38.760 46.358 Atomic orbital electron populations 1.24195 0.76457 1.09725 1.09342 1.44817 1.15809 1.19472 1.14795 0.72839 1.24150 1.05839 1.02405 0.86461 1.23890 1.05988 0.99452 0.81556 1.22807 1.01323 0.96456 0.93383 0.85965 1.23759 1.01101 0.99541 0.94606 1.22633 0.87863 0.99681 0.91042 0.90365 1.45869 1.24190 1.27532 1.38506 1.21087 0.87883 0.81208 0.80144 1.90756 1.48874 1.38060 1.69509 1.21547 0.96837 1.00148 0.98449 1.21165 0.96383 0.99205 0.97347 1.23036 0.99681 0.87425 0.91780 1.86055 1.41480 1.48137 1.49749 1.19150 0.87557 0.95089 0.91041 1.20311 1.00238 0.98795 0.97736 1.20117 0.94489 0.96951 0.96737 1.25373 0.99751 0.99663 0.95012 1.86578 1.46472 1.46295 1.56521 0.93955 0.80362 0.76472 0.80928 1.21191 0.98991 0.95612 1.02023 1.21315 0.97637 0.97105 0.93039 1.21593 0.95338 1.01048 1.04172 1.23318 1.03304 0.95159 0.94615 0.85756 0.85594 0.86425 0.85454 0.85818 0.85997 0.83814 0.83523 0.86892 0.91189 0.74178 0.85807 0.85172 0.92130 0.92669 0.90134 0.89622 0.86670 0.86068 0.76468 1.20536 1.23560 0.83721 0.82346 0.82598 0.90552 0.86500 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.44 8.98 127.69 1.15 4.59 16 2 N -0.37 24.62 0.66 -948.82 -0.62 24.00 16 3 H 0.44 -29.67 8.44 -89.70 -0.76 -30.43 16 4 C -0.05 3.02 9.19 127.69 1.17 4.20 16 5 C 0.01 -0.81 4.48 86.30 0.39 -0.43 16 6 C -0.12 6.38 3.57 -10.21 -0.04 6.34 16 7 H 0.12 -6.54 6.10 -2.39 -0.01 -6.55 16 8 C -0.15 6.76 7.44 31.18 0.23 6.99 16 9 C 0.09 -3.24 4.21 45.52 0.19 -3.05 16 10 H 0.08 -2.04 7.50 -2.39 -0.02 -2.05 16 11 N -0.71 22.56 5.36 -440.04 -2.36 20.20 16 12 C 0.51 -11.02 7.83 87.66 0.69 -10.34 16 13 O -0.59 5.65 15.60 -3.03 -0.05 5.60 16 14 C -0.13 3.41 5.70 29.85 0.17 3.58 16 15 C -0.10 1.72 4.87 30.59 0.15 1.87 16 16 C 0.06 -0.96 4.74 71.98 0.34 -0.62 16 17 O -0.34 2.52 10.14 -92.51 -0.94 1.58 16 18 C 0.12 -0.88 6.69 22.50 0.15 -0.73 16 19 C -0.15 0.75 9.55 22.36 0.21 0.97 16 20 C -0.08 0.65 5.39 -19.88 -0.11 0.55 16 21 C -0.09 0.71 2.82 71.24 0.20 0.91 16 22 O -0.55 2.24 12.77 -148.98 -1.90 0.34 16 23 Si 0.78 -7.96 29.78 68.60 2.04 -5.92 16 24 C -0.16 1.86 8.67 22.28 0.19 2.06 16 25 C -0.07 1.02 10.04 22.26 0.22 1.25 16 26 C -0.20 2.67 9.04 22.36 0.20 2.87 16 27 C -0.13 5.57 7.39 31.12 0.23 5.80 16 28 H 0.12 -7.74 8.11 -2.39 -0.02 -7.76 16 29 H 0.13 -7.83 8.14 -2.39 -0.02 -7.85 16 30 H 0.12 -7.16 6.10 -2.39 -0.01 -7.17 16 31 H 0.13 -8.23 8.11 -2.38 -0.02 -8.25 16 32 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 33 H 0.12 -7.76 8.14 -2.39 -0.02 -7.78 16 34 H 0.14 -9.12 8.09 -2.39 -0.02 -9.14 16 35 H 0.15 -9.45 7.80 -2.39 -0.02 -9.47 16 36 H 0.11 -5.40 7.90 -2.39 -0.02 -5.42 16 37 H 0.07 -2.84 8.14 -2.38 -0.02 -2.86 16 38 H 0.42 -16.36 8.71 -92.71 -0.81 -17.17 16 39 H 0.12 -3.80 8.14 -2.39 -0.02 -3.82 16 40 H 0.13 -4.19 8.14 -2.39 -0.02 -4.21 16 41 H 0.06 -0.74 8.10 -2.38 -0.02 -0.76 16 42 H 0.05 -0.61 8.10 -2.39 -0.02 -0.63 16 43 H 0.08 -1.67 7.66 -2.39 -0.02 -1.69 16 44 H 0.09 -1.86 7.66 -2.38 -0.02 -1.88 16 45 H 0.12 -0.28 8.06 -2.91 -0.02 -0.30 16 46 H 0.12 -1.07 7.96 -2.39 -0.02 -1.09 16 47 H 0.39 -3.84 8.70 -74.05 -0.64 -4.48 16 48 H -0.28 1.98 7.11 99.48 0.71 2.68 16 49 H -0.31 0.52 7.11 99.48 0.71 1.23 16 50 H 0.15 -2.23 4.87 -2.91 -0.01 -2.24 16 51 H 0.16 -3.14 8.06 -2.91 -0.02 -3.17 16 52 H 0.16 -3.06 6.30 -2.91 -0.02 -3.08 16 53 H 0.08 -3.09 8.14 -2.39 -0.02 -3.11 16 54 H 0.12 -5.60 8.07 -2.39 -0.02 -5.62 16 Total: 1.00 -89.98 426.53 0.65 -89.32 By element: Atomic # 1 Polarization: -160.67 SS G_CDS: -1.27 Total: -161.94 kcal Atomic # 6 Polarization: 21.06 SS G_CDS: 5.75 Total: 26.81 kcal Atomic # 7 Polarization: 47.18 SS G_CDS: -2.98 Total: 44.20 kcal Atomic # 8 Polarization: 10.41 SS G_CDS: -2.89 Total: 7.53 kcal Atomic # 14 Polarization: -7.96 SS G_CDS: 2.04 Total: -5.92 kcal Total: -89.98 0.65 -89.32 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4549616.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 131.346 kcal (2) G-P(sol) polarization free energy of solvation -89.978 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 41.368 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -89.324 kcal (6) G-S(sol) free energy of system = (1) + (5) 42.022 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds