Wall clock time and date at job start Sun Mar 7 2021 06:27:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35996 * 117.00214 * 2 1 4 4 C 1.39145 * 120.07575 * 180.02562 * 3 2 1 5 5 O 1.35997 * 120.07226 * 0.02562 * 4 3 2 6 6 C 1.42901 * 117.00274 * 179.97438 * 5 4 3 7 7 C 1.50693 * 109.47171 * 180.02562 * 6 5 4 8 8 O 1.21277 * 120.00480 * 0.02562 * 7 6 5 9 9 N 1.34779 * 120.00097 * 179.97438 * 7 6 5 10 10 C 1.46496 * 120.00322 * 180.02562 * 9 7 6 11 11 H 1.09004 * 112.85002 * 336.19435 * 10 9 7 12 12 C 1.53782 * 113.61464 * 107.50283 * 10 9 7 13 13 C 1.53787 * 87.07771 * 139.98292 * 12 10 9 14 14 H 1.08999 * 113.69180 * 89.12904 * 13 12 10 15 15 C 1.52999 * 113.60911 * 220.01660 * 13 12 10 16 16 N 1.46896 * 109.47460 * 272.49545 * 15 13 12 17 17 H 1.00898 * 109.47052 * 55.00162 * 16 15 13 18 18 C 1.46896 * 109.47703 * 175.00286 * 16 15 13 19 19 C 1.46903 * 109.47328 * 295.00568 * 16 15 13 20 20 C 1.53775 * 87.08261 * 334.56579 * 13 12 10 21 21 C 1.38568 * 119.85615 * 180.02562 * 4 3 2 22 22 C 1.38238 * 119.99995 * 359.97438 * 21 4 3 23 23 N 1.48002 * 119.92625 * 180.02562 * 22 21 4 24 24 O 1.21796 * 120.00334 * 0.02562 * 23 22 21 25 25 O 1.21806 * 119.99951 * 180.02562 * 23 22 21 26 26 C 1.38256 * 120.14637 * 0.02562 * 22 21 4 27 27 C 1.50699 * 119.92752 * 179.97438 * 26 22 21 28 28 O 1.42894 * 109.47188 * 75.00139 * 27 26 22 29 29 Si 1.86298 * 109.46950 * 195.00813 * 27 26 22 30 30 C 1.38243 * 120.14424 * 0.23746 * 26 22 21 31 31 H 1.09004 * 109.47163 * 59.99705 * 1 2 3 32 32 H 1.08993 * 109.46944 * 180.02562 * 1 2 3 33 33 H 1.09003 * 109.47077 * 300.00135 * 1 2 3 34 34 H 1.09007 * 109.46878 * 300.00186 * 6 5 4 35 35 H 1.09003 * 109.47018 * 59.99863 * 6 5 4 36 36 H 0.97009 * 120.00025 * 0.02562 * 9 7 6 37 37 H 1.08994 * 113.61424 * 254.52493 * 12 10 9 38 38 H 1.09000 * 113.61469 * 25.43551 * 12 10 9 39 39 H 1.08996 * 109.47631 * 32.50286 * 15 13 12 40 40 H 1.09009 * 109.46964 * 152.50087 * 15 13 12 41 41 H 1.09001 * 109.47133 * 60.00018 * 18 16 15 42 42 H 1.08994 * 109.47723 * 180.02562 * 18 16 15 43 43 H 1.09004 * 109.47034 * 300.00577 * 18 16 15 44 44 H 1.09000 * 109.46994 * 59.99687 * 19 16 15 45 45 H 1.09000 * 109.46978 * 179.97438 * 19 16 15 46 46 H 1.09001 * 109.46798 * 299.99547 * 19 16 15 47 47 H 1.09006 * 113.61697 * 270.88409 * 20 13 12 48 48 H 1.09001 * 113.61394 * 139.98789 * 20 13 12 49 49 H 1.08000 * 119.99749 * 180.02562 * 21 4 3 50 50 H 1.09006 * 109.46662 * 315.00409 * 27 26 22 51 51 H 0.96709 * 113.99337 * 60.00344 * 28 27 26 52 52 H 1.48506 * 109.99834 * 180.02562 * 29 27 26 53 53 H 1.48502 * 110.00011 * 301.31529 * 29 27 26 54 54 H 1.07999 * 119.99837 * 179.71146 * 30 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0465 1.2117 0.0000 4 6 3.4359 1.2863 -0.0005 5 8 4.1795 0.1476 -0.0016 6 6 5.6003 0.3006 -0.0027 7 6 6.2518 -1.0583 -0.0044 8 8 5.5670 -2.0592 -0.0051 9 7 7.5957 -1.1613 -0.0061 10 6 8.2290 -2.4823 -0.0083 11 1 7.5838 -3.2618 0.3970 12 6 8.8759 -2.8531 -1.3533 13 6 10.0313 -3.4609 -0.5405 14 1 9.8806 -4.5088 -0.2812 15 6 11.4120 -3.1901 -1.1414 16 7 11.7352 -4.2386 -2.1182 17 1 11.0004 -4.2942 -2.8074 18 6 13.0053 -3.9153 -2.7816 19 6 11.8579 -5.5297 -1.4282 20 6 9.6476 -2.4863 0.5855 21 6 4.0603 2.5233 0.0000 22 6 3.3030 3.6798 0.0005 23 7 3.9716 5.0002 0.0005 24 8 5.1878 5.0671 -0.0004 25 8 3.3057 6.0201 0.0015 26 6 1.9225 3.6058 0.0011 27 6 1.1017 4.8697 0.0022 28 8 1.1342 5.4599 -1.2987 29 14 -0.6591 4.4662 0.4576 30 6 1.2933 2.3748 0.0060 31 1 -0.3634 0.5139 -0.8900 32 1 -0.3633 -1.0276 0.0005 33 1 -0.3633 0.5139 0.8900 34 1 5.9059 0.8507 -0.8927 35 1 5.9073 0.8500 0.8873 36 1 8.1435 -0.3608 -0.0059 37 1 8.3082 -3.5890 -1.9227 38 1 9.1688 -1.9891 -1.9499 39 1 11.4084 -2.2197 -1.6378 40 1 12.1597 -3.1897 -0.3482 41 1 13.7991 -3.8552 -2.0371 42 1 13.2449 -4.6930 -3.5067 43 1 12.9142 -2.9572 -3.2936 44 1 10.9155 -5.7696 -0.9360 45 1 12.0973 -6.3077 -2.1531 46 1 12.6518 -5.4696 -0.6837 47 1 10.1515 -1.5220 0.5190 48 1 9.7030 -2.9261 1.5813 49 1 5.1386 2.5839 -0.0008 50 1 1.5137 5.5697 0.7292 51 1 0.7818 4.8915 -1.9973 52 1 -1.4791 5.7043 0.4617 53 1 -1.2220 3.4881 -0.5077 54 1 0.2147 2.3197 0.0111 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4549636.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:34 Heat of formation + Delta-G solvation = 37.062475 kcal Electronic energy + Delta-G solvation = -37817.050769 eV Core-core repulsion = 32652.390161 eV Total energy + Delta-G solvation = -5164.660608 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 397.194 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.41136 -42.23979 -42.09339 -41.07822 -39.91311 -39.33613 -38.90122 -37.74457 -37.27253 -34.85037 -32.73600 -32.59105 -30.66767 -29.45314 -29.37502 -28.78907 -27.95566 -26.86284 -26.03024 -25.65210 -24.22675 -23.53109 -23.14659 -21.84874 -20.88679 -20.82140 -19.85524 -19.57155 -19.31151 -18.80595 -18.67664 -18.43834 -17.87548 -17.76905 -17.72913 -17.46729 -17.26667 -16.91707 -16.65755 -16.50290 -16.24307 -16.14553 -15.70083 -15.65997 -15.15910 -14.86663 -14.62470 -14.52327 -13.97052 -13.86032 -13.81335 -13.58434 -13.49813 -13.48229 -13.43051 -13.26392 -13.18937 -13.09735 -12.96637 -12.73855 -12.53016 -12.51487 -12.41207 -12.26869 -12.22875 -12.16021 -11.77142 -11.74028 -11.51946 -11.08764 -10.69488 -10.52292 -10.18691 -9.53609 -5.05684 -1.38360 -0.47750 0.14358 0.28762 1.01856 1.08725 1.23816 1.33683 1.40544 1.82728 1.84736 1.90810 2.32218 2.91527 2.93994 2.96360 3.13384 3.16596 3.22401 3.37427 3.38805 3.42042 3.44207 3.53374 3.70841 3.76570 3.84090 3.86298 3.90475 3.94012 4.01347 4.06207 4.16399 4.21232 4.25203 4.27535 4.34286 4.35145 4.36535 4.50441 4.55594 4.66313 4.67872 4.69879 4.71288 4.73105 4.79999 4.86051 4.88146 4.94677 5.04844 5.14007 5.24752 5.45212 5.55312 5.99407 6.34950 6.38739 6.46171 7.05052 Molecular weight = 397.19amu Principal moments of inertia in cm(-1) A = 0.013706 B = 0.001592 C = 0.001467 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2042.450649 B =17582.736029 C =19076.928905 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.000 4.000 2 O -0.305 6.305 3 C 0.168 3.832 4 C 0.105 3.895 5 O -0.291 6.291 6 C 0.019 3.981 7 C 0.517 3.483 8 O -0.568 6.568 9 N -0.700 5.700 10 C 0.096 3.904 11 H 0.085 0.915 12 C -0.152 4.152 13 C -0.121 4.121 14 H 0.125 0.875 15 C 0.011 3.989 16 N -0.373 5.373 17 H 0.436 0.564 18 C -0.046 4.046 19 C -0.055 4.055 20 C -0.126 4.126 21 C -0.105 4.105 22 C -0.043 4.043 23 N 0.035 4.965 24 O -0.176 6.176 25 O -0.174 6.174 26 C -0.035 4.035 27 C -0.099 4.099 28 O -0.528 6.528 29 Si 0.769 3.231 30 C -0.174 4.174 31 H 0.073 0.927 32 H 0.123 0.877 33 H 0.087 0.913 34 H 0.128 0.872 35 H 0.126 0.874 36 H 0.423 0.577 37 H 0.072 0.928 38 H 0.114 0.886 39 H 0.146 0.854 40 H 0.144 0.856 41 H 0.121 0.879 42 H 0.123 0.877 43 H 0.126 0.874 44 H 0.119 0.881 45 H 0.125 0.875 46 H 0.124 0.876 47 H 0.117 0.883 48 H 0.078 0.922 49 H 0.189 0.811 50 H 0.128 0.872 51 H 0.383 0.617 52 H -0.299 1.299 53 H -0.250 1.250 54 H 0.183 0.817 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 33.203 -27.058 -6.489 43.320 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.094 4.094 2 O -0.217 6.217 3 C 0.119 3.881 4 C 0.057 3.943 5 O -0.204 6.204 6 C -0.058 4.058 7 C 0.303 3.697 8 O -0.446 6.446 9 N -0.354 5.354 10 C -0.008 4.008 11 H 0.103 0.897 12 C -0.191 4.191 13 C -0.139 4.139 14 H 0.143 0.857 15 C -0.111 4.111 16 N 0.051 4.949 17 H 0.272 0.728 18 C -0.188 4.188 19 C -0.197 4.197 20 C -0.164 4.164 21 C -0.125 4.125 22 C -0.127 4.127 23 N 0.549 4.451 24 O -0.389 6.389 25 O -0.386 6.386 26 C -0.037 4.037 27 C -0.207 4.207 28 O -0.336 6.336 29 Si 0.671 3.329 30 C -0.193 4.193 31 H 0.092 0.908 32 H 0.142 0.858 33 H 0.105 0.895 34 H 0.146 0.854 35 H 0.144 0.856 36 H 0.261 0.739 37 H 0.091 0.909 38 H 0.132 0.868 39 H 0.164 0.836 40 H 0.162 0.838 41 H 0.140 0.860 42 H 0.142 0.858 43 H 0.144 0.856 44 H 0.137 0.863 45 H 0.144 0.856 46 H 0.142 0.858 47 H 0.135 0.865 48 H 0.097 0.903 49 H 0.206 0.794 50 H 0.146 0.854 51 H 0.232 0.768 52 H -0.226 1.226 53 H -0.175 1.175 54 H 0.200 0.800 Dipole moment (debyes) X Y Z Total from point charges 32.066 -28.287 -6.231 43.212 hybrid contribution -0.043 1.214 -1.216 1.719 sum 32.023 -27.073 -7.447 42.590 Atomic orbital electron populations 1.23731 0.75052 1.06957 1.03638 1.86308 1.24404 1.24630 1.86318 1.18680 0.89437 0.86121 0.93829 1.17859 0.88478 0.85240 1.02693 1.86306 1.18757 1.26585 1.88741 1.23026 0.78719 0.96883 1.07220 1.20263 0.83769 0.89916 0.75768 1.90799 1.64201 1.39754 1.49831 1.45676 1.04535 1.10740 1.74420 1.22722 0.93943 0.84702 0.99452 0.89709 1.23758 0.96702 1.02306 0.96320 1.22777 0.92258 1.01932 0.96974 0.85720 1.23907 0.98914 0.93031 0.95203 1.44818 1.18015 1.14976 1.17120 0.72808 1.24135 0.84375 1.08063 1.02232 1.24196 1.09118 0.83674 1.02700 1.23348 0.92665 1.01469 0.98958 1.20904 1.03050 0.87832 1.00701 1.20542 0.92578 0.82100 1.17475 1.43705 1.00807 1.03413 0.97197 1.94474 0.96498 1.94077 1.53881 1.94615 1.64495 1.25358 1.54084 1.20055 0.91230 0.97158 0.95229 1.25692 1.11345 0.93974 0.89640 1.86785 1.85266 1.45080 1.16428 0.94342 0.70577 0.79765 0.88249 1.21212 1.02207 0.88616 1.07250 0.90845 0.85840 0.89491 0.85430 0.85596 0.73877 0.90875 0.86818 0.83564 0.83791 0.86031 0.85833 0.85562 0.86295 0.85642 0.85790 0.86458 0.90300 0.79389 0.85412 0.76818 1.22647 1.17516 0.80014 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 0.01 9.81 113.37 1.11 1.12 16 2 O -0.31 4.02 10.28 -79.63 -0.82 3.21 16 3 C 0.17 -2.41 6.70 22.57 0.15 -2.26 16 4 C 0.10 -1.56 6.70 22.57 0.15 -1.41 16 5 O -0.29 4.13 9.45 -67.11 -0.63 3.49 16 6 C 0.02 -0.46 5.22 71.23 0.37 -0.09 16 7 C 0.52 -11.31 7.91 87.65 0.69 -10.62 16 8 O -0.57 5.51 16.10 16.02 0.26 5.76 16 9 N -0.70 23.09 5.35 -440.04 -2.36 20.74 16 10 C 0.10 -3.51 4.24 45.52 0.19 -3.32 16 11 H 0.08 -2.39 7.46 -2.38 -0.02 -2.41 16 12 C -0.15 7.01 7.43 31.12 0.23 7.24 16 13 C -0.12 6.50 3.58 -10.27 -0.04 6.46 16 14 H 0.12 -6.85 6.10 -2.39 -0.01 -6.86 16 15 C 0.01 -0.72 4.48 86.30 0.39 -0.33 16 16 N -0.37 24.82 0.66 -948.86 -0.62 24.20 16 17 H 0.44 -29.97 8.44 -89.70 -0.76 -30.72 16 18 C -0.05 2.99 9.19 127.69 1.17 4.17 16 19 C -0.05 3.46 8.98 127.69 1.15 4.61 16 20 C -0.13 5.75 7.39 31.12 0.23 5.98 16 21 C -0.11 1.72 8.54 22.35 0.19 1.91 16 22 C -0.04 0.46 6.85 36.38 0.25 0.71 16 23 N 0.04 -0.15 4.45 -46.46 -0.21 -0.36 16 24 O -0.18 0.75 18.44 18.89 0.35 1.10 16 25 O -0.17 -0.04 14.62 25.10 0.37 0.32 16 26 C -0.03 0.45 5.26 -19.86 -0.10 0.34 16 27 C -0.10 1.09 1.74 71.24 0.12 1.21 16 28 O -0.53 3.92 11.80 -129.62 -1.53 2.39 16 29 Si 0.77 -11.77 30.23 68.60 2.07 -9.69 16 30 C -0.17 2.91 7.65 22.35 0.17 3.08 16 31 H 0.07 -1.65 7.68 -2.39 -0.02 -1.67 16 32 H 0.12 -2.78 8.14 -2.39 -0.02 -2.80 16 33 H 0.09 -2.11 7.65 -2.39 -0.02 -2.13 16 34 H 0.13 -3.90 7.66 -2.38 -0.02 -3.92 16 35 H 0.13 -3.74 7.66 -2.39 -0.02 -3.76 16 36 H 0.42 -17.01 8.73 -92.70 -0.81 -17.82 16 37 H 0.07 -3.09 8.14 -2.39 -0.02 -3.11 16 38 H 0.11 -5.57 7.90 -2.39 -0.02 -5.59 16 39 H 0.15 -9.48 7.79 -2.39 -0.02 -9.50 16 40 H 0.14 -9.21 8.09 -2.38 -0.02 -9.22 16 41 H 0.12 -7.75 8.14 -2.39 -0.02 -7.77 16 42 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 43 H 0.13 -8.15 8.11 -2.39 -0.02 -8.17 16 44 H 0.12 -7.35 6.10 -2.39 -0.01 -7.36 16 45 H 0.13 -7.86 8.14 -2.39 -0.02 -7.88 16 46 H 0.12 -7.78 8.11 -2.39 -0.02 -7.80 16 47 H 0.12 -5.74 8.08 -2.38 -0.02 -5.75 16 48 H 0.08 -3.30 8.14 -2.39 -0.02 -3.32 16 49 H 0.19 -4.21 5.85 -2.91 -0.02 -4.23 16 50 H 0.13 -1.06 6.07 -2.38 -0.01 -1.07 16 51 H 0.38 -5.78 8.70 -74.05 -0.64 -6.42 16 52 H -0.30 1.75 7.11 99.48 0.71 2.46 16 53 H -0.25 4.09 6.69 99.48 0.67 4.75 16 54 H 0.18 -3.85 3.09 -2.91 -0.01 -3.86 16 Total: 1.00 -95.96 434.96 2.08 -93.88 By element: Atomic # 1 Polarization: -162.59 SS G_CDS: -1.23 Total: -163.82 kcal Atomic # 6 Polarization: 12.36 SS G_CDS: 6.43 Total: 18.79 kcal Atomic # 7 Polarization: 47.76 SS G_CDS: -3.19 Total: 44.57 kcal Atomic # 8 Polarization: 18.28 SS G_CDS: -2.01 Total: 16.27 kcal Atomic # 14 Polarization: -11.77 SS G_CDS: 2.07 Total: -9.69 kcal Total: -95.96 2.08 -93.88 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4549636.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 130.939 kcal (2) G-P(sol) polarization free energy of solvation -95.959 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 34.980 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.877 kcal (6) G-S(sol) free energy of system = (1) + (5) 37.062 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds