Wall clock time and date at job start Sun Mar 7 2021 06:27:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00904 * 109.46879 * 2 1 4 4 C 1.46902 * 109.47478 * 120.00552 * 2 1 3 5 5 C 1.46910 * 109.47012 * 240.00574 * 2 1 3 6 6 C 1.53003 * 109.47047 * 64.99809 * 5 2 1 7 7 H 1.09000 * 112.85087 * 43.80328 * 6 5 2 8 8 C 1.53781 * 113.61283 * 174.99974 * 6 5 2 9 9 C 1.53778 * 87.08050 * 139.97915 * 8 6 5 10 10 H 1.08997 * 113.61742 * 89.20076 * 9 8 6 11 11 N 1.46502 * 113.61373 * 220.02064 * 9 8 6 12 12 C 1.34780 * 119.99852 * 205.00119 * 11 9 8 13 13 O 1.21279 * 119.99721 * 359.97438 * 12 11 9 14 14 C 1.50700 * 119.99797 * 180.02562 * 12 11 9 15 15 O 1.42900 * 109.46759 * 180.02562 * 14 12 11 16 16 C 1.35904 * 117.00131 * 179.97438 * 15 14 12 17 17 C 1.38705 * 120.05898 * 180.29486 * 16 15 14 18 18 C 1.38173 * 119.94106 * 180.29847 * 17 16 15 19 19 C 1.50701 * 119.96798 * 179.70184 * 18 17 16 20 20 O 1.42898 * 109.47201 * 64.98097 * 19 18 17 21 21 Si 1.86299 * 109.46917 * 184.98009 * 19 18 17 22 22 C 1.38232 * 120.05858 * 359.68223 * 18 17 16 23 23 C 1.38294 * 120.11124 * 0.02562 * 22 18 17 24 24 C 1.38122 * 120.05499 * 359.97438 * 23 22 18 25 25 C 1.53779 * 113.60926 * 272.49460 * 6 5 2 26 26 H 1.09001 * 109.46704 * 179.97438 * 1 2 3 27 27 H 1.08998 * 109.46859 * 299.99119 * 1 2 3 28 28 H 1.08997 * 109.47131 * 60.00077 * 1 2 3 29 29 H 1.09000 * 109.46970 * 180.02562 * 4 2 1 30 30 H 1.09004 * 109.46671 * 299.99882 * 4 2 1 31 31 H 1.09000 * 109.46789 * 60.00036 * 4 2 1 32 32 H 1.09000 * 109.46494 * 304.99416 * 5 2 1 33 33 H 1.08999 * 109.46987 * 184.99546 * 5 2 1 34 34 H 1.09002 * 113.61155 * 25.43055 * 8 6 5 35 35 H 1.08990 * 113.61502 * 254.53172 * 8 6 5 36 36 H 0.97005 * 120.00332 * 25.00332 * 11 9 8 37 37 H 1.09000 * 109.47614 * 60.00223 * 14 12 11 38 38 H 1.08994 * 109.47045 * 299.99585 * 14 12 11 39 39 H 1.07997 * 120.03207 * 0.02562 * 17 16 15 40 40 H 1.09005 * 109.47422 * 304.97762 * 19 18 17 41 41 H 0.96700 * 113.99760 * 179.97438 * 20 19 18 42 42 H 1.48500 * 110.00080 * 299.99836 * 21 19 18 43 43 H 1.48505 * 110.00261 * 61.31930 * 21 19 18 44 44 H 1.08003 * 119.94745 * 179.97438 * 22 18 17 45 45 H 1.08000 * 119.97251 * 179.97438 * 23 22 18 46 46 H 1.08002 * 120.02504 * 180.02562 * 24 23 22 47 47 H 1.09004 * 113.61352 * 105.47758 * 25 6 5 48 48 H 1.08992 * 113.62234 * 334.56971 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9588 -0.6926 1.1994 5 6 1.9587 -0.6924 -1.1996 6 6 1.5538 0.0979 -2.4456 7 1 1.7118 1.1708 -2.3362 8 6 2.1234 -0.4785 -3.7526 9 6 0.7621 -0.1609 -4.3937 10 1 0.7028 0.8410 -4.8188 11 7 0.2907 -1.1984 -5.3143 12 6 -0.5705 -0.8823 -6.3018 13 8 -0.9555 0.2608 -6.4278 14 6 -1.0559 -1.9497 -7.2485 15 8 -1.9523 -1.3712 -8.1991 16 6 -2.4842 -2.2042 -9.1320 17 6 -3.3571 -1.7085 -10.0891 18 6 -3.9012 -2.5587 -11.0327 19 6 -4.8550 -2.0221 -12.0687 20 8 -4.1665 -1.1032 -12.9194 21 14 -5.5220 -3.4316 -13.0880 22 6 -3.5711 -3.9011 -11.0273 23 6 -2.6963 -4.3966 -10.0778 24 6 -2.1497 -3.5508 -9.1325 25 6 0.1606 -0.2700 -2.9825 26 1 -0.3633 -1.0277 -0.0005 27 1 -0.3633 0.5137 0.8901 28 1 -0.3633 0.5138 -0.8900 29 1 3.0488 -0.6922 1.1995 30 1 1.5954 -0.1788 2.0894 31 1 1.5954 -1.7203 1.1992 32 1 1.5241 -1.6910 -1.2454 33 1 3.0450 -0.7706 -1.1560 34 1 2.3432 -1.5448 -3.7003 35 1 2.9468 0.1046 -4.1647 36 1 0.5983 -2.1128 -5.2133 37 1 -1.5740 -2.7262 -6.6858 38 1 -0.2048 -2.3861 -7.7711 39 1 -3.6148 -0.6597 -10.0942 40 1 -5.6798 -1.5101 -11.5728 41 1 -4.7205 -0.7177 -13.6120 42 1 -4.4074 -4.1377 -13.7693 43 1 -6.2676 -4.3780 -12.2197 44 1 -3.9978 -4.5641 -11.7654 45 1 -2.4403 -5.4458 -10.0754 46 1 -1.4662 -3.9383 -8.3914 47 1 -0.6005 0.4816 -2.7731 48 1 -0.1562 -1.2792 -2.7198 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4860298.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:55 Heat of formation + Delta-G solvation = 59.140305 kcal Electronic energy + Delta-G solvation = -26563.821524 eV Core-core repulsion = 22705.354529 eV Total energy + Delta-G solvation = -3858.466995 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -42.27349 -41.64556 -40.78653 -39.38765 -38.71163 -37.34288 -34.86691 -32.73924 -31.90143 -30.47335 -29.53523 -29.08319 -26.90455 -26.72405 -25.76101 -23.96442 -23.84686 -22.47019 -21.69432 -20.96871 -19.30706 -19.07175 -18.47972 -18.32570 -18.06088 -17.68430 -17.52548 -17.41492 -17.07016 -16.56242 -16.07389 -15.91486 -15.70461 -15.45701 -14.91511 -14.67370 -14.56588 -14.39262 -13.95488 -13.89059 -13.75806 -13.59076 -13.54001 -13.42810 -13.30743 -13.30572 -13.09950 -12.87693 -12.49040 -12.38629 -12.30284 -12.21149 -11.89526 -11.82105 -11.53275 -11.07845 -10.44247 -10.19206 -10.05380 -9.47182 -4.96249 0.02510 0.18272 1.02206 1.21734 1.32132 1.42953 1.60577 1.91270 2.44921 2.49203 2.88334 2.95584 3.18908 3.32053 3.34697 3.44011 3.47152 3.66508 3.69059 3.75770 3.76477 3.82983 3.92493 3.95158 3.99152 4.10484 4.13868 4.14742 4.20333 4.32403 4.34694 4.39330 4.45811 4.51843 4.65785 4.68238 4.72966 4.75401 4.80310 4.82768 4.87764 4.91545 5.02528 5.03851 5.11555 5.14439 5.26283 5.43792 5.49624 6.12891 6.36401 6.82216 7.04382 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.034351 B = 0.001889 C = 0.001868 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 814.910368 B =14816.947989 C =14988.155732 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.371 5.371 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.012 3.988 6 C -0.117 4.117 7 H 0.124 0.876 8 C -0.126 4.126 9 C 0.093 3.907 10 H 0.082 0.918 11 N -0.698 5.698 12 C 0.514 3.486 13 O -0.573 6.573 14 C 0.028 3.972 15 O -0.318 6.318 16 C 0.122 3.878 17 C -0.144 4.144 18 C -0.052 4.052 19 C -0.087 4.087 20 O -0.565 6.565 21 Si 0.779 3.221 22 C -0.182 4.182 23 C -0.073 4.073 24 C -0.198 4.198 25 C -0.152 4.152 26 H 0.123 0.877 27 H 0.125 0.875 28 H 0.114 0.886 29 H 0.127 0.873 30 H 0.123 0.877 31 H 0.120 0.880 32 H 0.142 0.858 33 H 0.150 0.850 34 H 0.118 0.882 35 H 0.077 0.923 36 H 0.423 0.577 37 H 0.128 0.872 38 H 0.121 0.879 39 H 0.124 0.876 40 H 0.091 0.909 41 H 0.404 0.596 42 H -0.294 1.294 43 H -0.285 1.285 44 H 0.118 0.882 45 H 0.158 0.842 46 H 0.171 0.829 47 H 0.075 0.925 48 H 0.115 0.885 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.944 1.085 35.230 38.284 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.053 4.947 3 H 0.275 0.725 4 C -0.188 4.188 5 C -0.109 4.109 6 C -0.136 4.136 7 H 0.142 0.858 8 C -0.164 4.164 9 C -0.011 4.011 10 H 0.100 0.900 11 N -0.352 5.352 12 C 0.300 3.700 13 O -0.452 6.452 14 C -0.049 4.049 15 O -0.232 6.232 16 C 0.077 3.923 17 C -0.163 4.163 18 C -0.053 4.053 19 C -0.196 4.196 20 O -0.375 6.375 21 Si 0.684 3.316 22 C -0.200 4.200 23 C -0.091 4.091 24 C -0.216 4.216 25 C -0.190 4.190 26 H 0.141 0.859 27 H 0.144 0.856 28 H 0.132 0.868 29 H 0.146 0.854 30 H 0.141 0.859 31 H 0.139 0.861 32 H 0.160 0.840 33 H 0.168 0.832 34 H 0.136 0.864 35 H 0.096 0.904 36 H 0.261 0.739 37 H 0.146 0.854 38 H 0.138 0.862 39 H 0.142 0.858 40 H 0.109 0.891 41 H 0.255 0.745 42 H -0.222 1.222 43 H -0.212 1.212 44 H 0.136 0.864 45 H 0.176 0.824 46 H 0.189 0.811 47 H 0.094 0.906 48 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 15.042 0.851 35.438 38.508 hybrid contribution 0.259 0.242 -0.108 0.371 sum 15.301 1.093 35.330 38.517 Atomic orbital electron populations 1.24270 0.76790 1.09632 1.09269 1.44851 1.15532 1.19586 1.14761 0.72516 1.24130 1.05809 1.02335 0.86491 1.23903 1.06159 0.99309 0.81576 1.22688 0.95849 1.02029 0.93044 0.85805 1.23338 0.95193 1.04016 0.93877 1.22750 0.97130 0.92223 0.89005 0.90027 1.45654 1.45609 1.13868 1.30107 1.20435 0.79178 0.88691 0.81681 1.90785 1.58004 1.23331 1.73049 1.22871 0.95414 0.95742 0.90922 1.86130 1.59581 1.36690 1.40774 1.19094 0.93920 0.89858 0.89413 1.20336 0.99896 1.00594 0.95482 1.19467 0.97188 0.93291 0.95319 1.24957 0.96309 1.02927 0.95405 1.86442 1.41483 1.61987 1.47634 0.94146 0.80270 0.75169 0.82023 1.21062 1.02319 0.94859 1.01755 1.21260 0.93957 1.01255 0.92607 1.21603 1.05182 0.91437 1.03391 1.23874 0.97002 1.04303 0.93846 0.85860 0.85622 0.86802 0.85431 0.85866 0.86147 0.84030 0.83216 0.86370 0.90429 0.73866 0.85440 0.86162 0.85773 0.89079 0.74477 1.22205 1.21189 0.86446 0.82446 0.81120 0.90627 0.86670 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.55 8.57 127.69 1.09 4.64 16 2 N -0.37 24.62 0.66 -948.81 -0.62 24.00 16 3 H 0.44 -30.44 8.41 -89.69 -0.75 -31.20 16 4 C -0.05 2.97 9.19 127.69 1.17 4.14 16 5 C 0.01 -0.78 4.57 86.30 0.39 -0.39 16 6 C -0.12 6.25 3.31 -10.27 -0.03 6.22 16 7 H 0.12 -6.72 8.09 -2.39 -0.02 -6.74 16 8 C -0.13 5.64 7.39 31.12 0.23 5.87 16 9 C 0.09 -3.30 4.24 45.52 0.19 -3.10 16 10 H 0.08 -2.15 7.46 -2.39 -0.02 -2.17 16 11 N -0.70 22.10 5.35 -440.03 -2.36 19.74 16 12 C 0.51 -9.97 7.91 87.66 0.69 -9.27 16 13 O -0.57 3.79 16.10 16.01 0.26 4.05 16 14 C 0.03 -0.60 5.22 71.24 0.37 -0.23 16 15 O -0.32 2.81 9.67 -73.43 -0.71 2.10 16 16 C 0.12 -1.02 6.69 22.51 0.15 -0.87 16 17 C -0.14 0.60 9.62 22.37 0.22 0.82 16 18 C -0.05 0.25 5.38 -19.88 -0.11 0.15 16 19 C -0.09 0.79 2.79 71.24 0.20 0.98 16 20 O -0.57 4.58 12.81 -148.98 -1.91 2.67 16 21 Si 0.78 -8.74 29.85 68.60 2.05 -6.69 16 22 C -0.18 1.18 8.67 22.28 0.19 1.37 16 23 C -0.07 0.86 10.04 22.26 0.22 1.08 16 24 C -0.20 2.82 9.04 22.37 0.20 3.02 16 25 C -0.15 6.93 5.69 31.12 0.18 7.10 16 26 H 0.12 -7.61 8.11 -2.39 -0.02 -7.63 16 27 H 0.13 -7.75 8.14 -2.39 -0.02 -7.77 16 28 H 0.11 -6.69 5.13 -2.39 -0.01 -6.70 16 29 H 0.13 -8.26 8.11 -2.39 -0.02 -8.28 16 30 H 0.12 -7.83 8.14 -2.39 -0.02 -7.85 16 31 H 0.12 -7.68 8.14 -2.39 -0.02 -7.69 16 32 H 0.14 -9.08 7.79 -2.39 -0.02 -9.10 16 33 H 0.15 -9.69 8.09 -2.39 -0.02 -9.71 16 34 H 0.12 -5.73 8.08 -2.39 -0.02 -5.75 16 35 H 0.08 -3.16 8.14 -2.39 -0.02 -3.18 16 36 H 0.42 -16.68 8.73 -92.70 -0.81 -17.49 16 37 H 0.13 -3.64 7.66 -2.39 -0.02 -3.66 16 38 H 0.12 -3.21 7.66 -2.39 -0.02 -3.23 16 39 H 0.12 -0.37 8.06 -2.91 -0.02 -0.39 16 40 H 0.09 -1.15 7.96 -2.38 -0.02 -1.17 16 41 H 0.40 -7.51 8.74 -74.06 -0.65 -8.15 16 42 H -0.29 1.20 7.05 99.48 0.70 1.90 16 43 H -0.28 1.84 7.11 99.48 0.71 2.54 16 44 H 0.12 -0.78 4.86 -2.91 -0.01 -0.80 16 45 H 0.16 -2.78 8.06 -2.91 -0.02 -2.80 16 46 H 0.17 -4.04 6.30 -2.91 -0.02 -4.06 16 47 H 0.08 -3.20 7.18 -2.38 -0.02 -3.22 16 48 H 0.12 -5.64 7.90 -2.39 -0.02 -5.66 16 Total: 1.00 -93.41 381.86 0.88 -92.53 By element: Atomic # 1 Polarization: -158.74 SS G_CDS: -1.20 Total: -159.94 kcal Atomic # 6 Polarization: 16.17 SS G_CDS: 5.37 Total: 21.54 kcal Atomic # 7 Polarization: 46.72 SS G_CDS: -2.98 Total: 43.74 kcal Atomic # 8 Polarization: 11.18 SS G_CDS: -2.36 Total: 8.82 kcal Atomic # 14 Polarization: -8.74 SS G_CDS: 2.05 Total: -6.69 kcal Total: -93.41 0.88 -92.53 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4860298.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 151.671 kcal (2) G-P(sol) polarization free energy of solvation -93.411 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.880 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -92.531 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.140 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds