Wall clock time and date at job start Sun Mar 7 2021 06:27:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35982 * 116.99790 * 2 1 4 4 C 1.38675 * 119.99685 * 180.02562 * 3 2 1 5 5 C 1.38153 * 120.00122 * 179.97438 * 4 3 2 6 6 C 1.50706 * 119.99876 * 179.97438 * 5 4 3 7 7 O 1.42902 * 109.46613 * 254.99791 * 6 5 4 8 8 Si 1.86293 * 109.47256 * 15.00080 * 6 5 4 9 9 C 1.38672 * 120.00095 * 359.97438 * 5 4 3 10 10 O 1.35982 * 120.00532 * 179.97438 * 9 5 4 11 11 C 1.42897 * 117.00205 * 180.02562 * 10 9 5 12 12 C 1.50701 * 109.46887 * 179.97438 * 11 10 9 13 13 O 1.21285 * 120.00067 * 359.97438 * 12 11 10 14 14 N 1.34771 * 119.99955 * 179.97438 * 12 11 10 15 15 C 1.46501 * 120.00286 * 180.02562 * 14 12 11 16 16 H 1.09002 * 112.84603 * 334.66643 * 15 14 12 17 17 C 1.53780 * 113.61544 * 105.86445 * 15 14 12 18 18 C 1.53953 * 87.02122 * 139.95340 * 17 15 14 19 19 H 1.09003 * 113.53821 * 89.18515 * 18 17 15 20 20 C 1.53003 * 113.74445 * 220.05608 * 18 17 15 21 21 N 1.46897 * 109.47004 * 272.59899 * 20 18 17 22 22 H 1.00898 * 109.47094 * 304.99744 * 21 20 18 23 23 C 1.46897 * 109.47178 * 64.99659 * 21 20 18 24 24 C 1.46893 * 109.46975 * 185.00085 * 21 20 18 25 25 C 1.53782 * 113.61558 * 203.47378 * 15 14 12 26 26 C 1.38725 * 119.99774 * 0.02562 * 9 5 4 27 27 C 1.38104 * 119.99910 * 359.97438 * 26 9 5 28 28 H 1.08996 * 109.47426 * 180.02562 * 1 2 3 29 29 H 1.09003 * 109.46927 * 300.00190 * 1 2 3 30 30 H 1.08997 * 109.47609 * 59.99732 * 1 2 3 31 31 H 1.08009 * 120.00109 * 359.73068 * 4 3 2 32 32 H 1.09000 * 109.46867 * 135.00695 * 6 5 4 33 33 H 0.96700 * 114.00133 * 300.00050 * 7 6 5 34 34 H 1.48503 * 110.00096 * 298.68206 * 8 6 5 35 35 H 1.48496 * 110.00162 * 60.00260 * 8 6 5 36 36 H 1.08999 * 109.47048 * 300.00189 * 11 10 9 37 37 H 1.09003 * 109.46867 * 60.00334 * 11 10 9 38 38 H 0.97001 * 120.00456 * 0.02562 * 14 12 11 39 39 H 1.08998 * 113.61312 * 254.53152 * 17 15 14 40 40 H 1.08997 * 113.61367 * 25.43632 * 17 15 14 41 41 H 1.08999 * 109.46540 * 32.59410 * 20 18 17 42 42 H 1.08999 * 109.47043 * 152.59752 * 20 18 17 43 43 H 1.09001 * 109.46775 * 179.97438 * 23 21 20 44 44 H 1.08998 * 109.47358 * 300.00149 * 23 21 20 45 45 H 1.08996 * 109.47321 * 60.00678 * 23 21 20 46 46 H 1.09004 * 109.47691 * 59.99875 * 24 21 20 47 47 H 1.09001 * 109.47298 * 179.97438 * 24 21 20 48 48 H 1.09004 * 109.47438 * 299.99459 * 24 21 20 49 49 H 1.08999 * 113.61457 * 334.56554 * 25 15 14 50 50 H 1.09001 * 113.61510 * 105.38285 * 25 15 14 51 51 H 1.08000 * 119.99925 * 179.97438 * 26 9 5 52 52 H 1.08001 * 120.00119 * 180.02562 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2116 0.0000 4 6 3.4312 1.2842 -0.0005 5 6 4.0584 2.5151 -0.0011 6 6 5.5634 2.5939 -0.0011 7 8 6.0207 2.9677 1.3002 8 14 6.2723 0.9320 -0.4549 9 6 3.3032 3.6782 -0.0016 10 8 3.9205 4.8898 -0.0016 11 6 3.0806 6.0459 -0.0016 12 6 3.9349 7.2874 -0.0010 13 8 5.1439 7.1916 -0.0001 14 7 3.3553 8.5041 -0.0014 15 6 4.1857 9.7110 -0.0013 16 1 5.1734 9.5452 0.4288 17 6 4.2180 10.4366 -1.3568 18 6 4.1495 11.7537 -0.5626 19 1 5.1280 12.1472 -0.2869 20 6 3.2420 12.8094 -1.1973 21 7 4.0126 13.5980 -2.1680 22 1 4.8263 13.9866 -1.7152 23 6 4.4359 12.7320 -3.2765 24 6 3.1755 14.6867 -2.6891 25 6 3.4699 10.9512 0.5595 26 6 1.9179 3.6056 -0.0011 27 6 1.2909 2.3751 -0.0005 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5139 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 4.0194 0.3784 0.0034 32 1 5.8882 3.3383 -0.7280 33 1 5.6901 3.8247 1.6021 34 1 5.8628 -0.0855 0.5463 35 1 5.8041 0.5319 -1.8062 36 1 2.4513 6.0377 -0.8916 37 1 2.4514 6.0378 0.8884 38 1 2.3883 8.5808 -0.0017 39 1 5.1523 10.3024 -1.9018 40 1 3.3375 10.2517 -1.9721 41 1 2.4128 12.3174 -1.7056 42 1 2.8530 13.4683 -0.4210 43 1 5.0073 13.3173 -3.9969 44 1 5.0571 11.9242 -2.8898 45 1 3.5570 12.3123 -3.7657 46 1 2.8614 15.3293 -1.8665 47 1 3.7474 15.2722 -3.4090 48 1 2.2965 14.2670 -3.1783 49 1 2.3846 10.9072 0.4690 50 1 3.8002 11.2309 1.5599 51 1 1.3297 4.5114 -0.0011 52 1 0.2124 2.3185 -0.0005 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:27:59 Heat of formation + Delta-G solvation = 22.315032 kcal Electronic energy + Delta-G solvation = -31349.610733 eV Core-core repulsion = 27015.327063 eV Total energy + Delta-G solvation = -4334.283670 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -42.25250 -41.92601 -40.98291 -40.08960 -39.04290 -38.14144 -37.04340 -34.80662 -32.96876 -31.31146 -30.40469 -29.52648 -29.15547 -28.10944 -26.70587 -26.68973 -25.79310 -24.31893 -23.34815 -22.54410 -21.73165 -20.98946 -19.67899 -19.09897 -18.93499 -18.54085 -18.13241 -18.00853 -17.58418 -17.51985 -17.37369 -16.79589 -16.70307 -16.21569 -15.99917 -15.80168 -15.66085 -15.55221 -15.33117 -14.74767 -14.51676 -14.20984 -14.01935 -13.93036 -13.68710 -13.58136 -13.55017 -13.50440 -13.41050 -13.29076 -13.15485 -13.07992 -12.85193 -12.61834 -12.42910 -12.33259 -12.27027 -11.79717 -11.58451 -11.50412 -11.33639 -11.17439 -10.99791 -10.28763 -10.14057 -8.98183 -4.91970 -0.11750 0.16724 1.03566 1.26935 1.38589 1.42347 1.54210 1.86725 2.18967 2.37854 2.51084 2.90102 2.97183 3.20514 3.34190 3.37913 3.45437 3.47209 3.60594 3.71238 3.77522 3.78872 3.89401 3.94153 3.98001 3.99292 4.04333 4.08144 4.15876 4.21343 4.21957 4.28705 4.29131 4.33929 4.40449 4.47730 4.52448 4.64190 4.67888 4.70723 4.75311 4.76955 4.82332 4.84607 4.88613 4.94260 4.94918 5.03491 5.06555 5.15577 5.24969 5.49553 6.02221 6.26649 6.40899 6.51694 7.10016 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.015426 B = 0.002016 C = 0.001874 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1814.695933 B =13882.780351 C =14936.956238 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.345 6.345 3 C 0.086 3.914 4 C -0.146 4.146 5 C -0.119 4.119 6 C -0.076 4.076 7 O -0.544 6.544 8 Si 0.803 3.197 9 C 0.101 3.899 10 O -0.309 6.309 11 C 0.028 3.972 12 C 0.515 3.485 13 O -0.568 6.568 14 N -0.700 5.700 15 C 0.096 3.904 16 H 0.083 0.917 17 C -0.153 4.153 18 C -0.118 4.118 19 H 0.124 0.876 20 C 0.012 3.988 21 N -0.371 5.371 22 H 0.438 0.562 23 C -0.057 4.057 24 C -0.046 4.046 25 C -0.126 4.126 26 C -0.151 4.151 27 C -0.160 4.160 28 H 0.111 0.889 29 H 0.070 0.930 30 H 0.072 0.928 31 H 0.119 0.881 32 H 0.085 0.915 33 H 0.373 0.627 34 H -0.294 1.294 35 H -0.268 1.268 36 H 0.125 0.875 37 H 0.121 0.879 38 H 0.422 0.578 39 H 0.075 0.925 40 H 0.113 0.887 41 H 0.141 0.859 42 H 0.150 0.850 43 H 0.125 0.875 44 H 0.114 0.886 45 H 0.123 0.877 46 H 0.127 0.873 47 H 0.123 0.877 48 H 0.120 0.880 49 H 0.117 0.883 50 H 0.077 0.923 51 H 0.179 0.821 52 H 0.165 0.835 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.570 41.891 -9.908 43.708 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.259 6.259 3 C 0.041 3.959 4 C -0.164 4.164 5 C -0.120 4.120 6 C -0.185 4.185 7 O -0.351 6.351 8 Si 0.706 3.294 9 C 0.056 3.944 10 O -0.223 6.223 11 C -0.050 4.050 12 C 0.301 3.699 13 O -0.446 6.446 14 N -0.354 5.354 15 C -0.008 4.008 16 H 0.101 0.899 17 C -0.191 4.191 18 C -0.137 4.137 19 H 0.142 0.858 20 C -0.110 4.110 21 N 0.053 4.947 22 H 0.275 0.725 23 C -0.200 4.200 24 C -0.188 4.188 25 C -0.164 4.164 26 C -0.170 4.170 27 C -0.178 4.178 28 H 0.130 0.870 29 H 0.089 0.911 30 H 0.091 0.909 31 H 0.136 0.864 32 H 0.103 0.897 33 H 0.221 0.779 34 H -0.222 1.222 35 H -0.194 1.194 36 H 0.143 0.857 37 H 0.139 0.861 38 H 0.260 0.740 39 H 0.093 0.907 40 H 0.132 0.868 41 H 0.159 0.841 42 H 0.167 0.833 43 H 0.143 0.857 44 H 0.133 0.867 45 H 0.141 0.859 46 H 0.145 0.855 47 H 0.141 0.859 48 H 0.138 0.862 49 H 0.135 0.865 50 H 0.096 0.904 51 H 0.197 0.803 52 H 0.182 0.818 Dipole moment (debyes) X Y Z Total from point charges -6.525 40.207 -10.291 42.012 hybrid contribution -1.590 0.430 0.593 1.751 sum -8.115 40.636 -9.697 42.558 Atomic orbital electron populations 1.23381 0.75936 1.05668 1.02683 1.86092 1.23903 1.26935 1.88994 1.19045 0.91752 0.85720 0.99376 1.20183 0.92918 0.97054 1.06265 1.19537 0.96813 0.90612 1.05020 1.25205 0.91002 1.13584 0.88662 1.86687 1.73855 1.42305 1.32224 0.92568 0.90101 0.70445 0.76314 1.18590 0.91392 0.84272 1.00176 1.86091 1.35353 1.11596 1.89255 1.22859 0.93106 0.82252 1.06740 1.20388 0.88156 0.85707 0.75673 1.90796 1.16643 1.87374 1.49775 1.45660 1.11324 1.03868 1.74585 1.22709 0.95812 0.82852 0.99440 0.89915 1.23894 1.04424 0.94463 0.96305 1.22725 1.00968 0.93251 0.96753 0.85843 1.23899 0.96144 0.96338 0.94590 1.44843 1.18420 1.15686 1.15767 0.72510 1.24268 1.06689 0.98304 0.90694 1.24126 0.98851 0.90308 1.05500 1.23326 1.01998 0.92024 0.99077 1.21460 0.92108 0.99858 1.03524 1.21451 1.01679 0.90781 1.03911 0.87050 0.91139 0.90948 0.86359 0.89735 0.77887 1.22154 1.19353 0.85742 0.86108 0.73991 0.90653 0.86836 0.84086 0.83261 0.85658 0.86734 0.85893 0.85451 0.85887 0.86166 0.86457 0.90398 0.80346 0.81751 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.25 9.81 113.37 1.11 0.86 16 2 O -0.34 1.59 10.50 -93.35 -0.98 0.61 16 3 C 0.09 -0.49 6.68 22.49 0.15 -0.34 16 4 C -0.15 0.35 8.59 22.35 0.19 0.55 16 5 C -0.12 0.64 5.27 -19.78 -0.10 0.54 16 6 C -0.08 0.44 2.33 71.24 0.17 0.60 16 7 O -0.54 2.20 12.65 -148.98 -1.89 0.31 16 8 Si 0.80 -4.79 30.41 68.60 2.09 -2.70 16 9 C 0.10 -1.16 6.62 22.49 0.15 -1.01 16 10 O -0.31 4.27 8.56 -74.31 -0.64 3.64 16 11 C 0.03 -0.71 5.22 71.24 0.37 -0.33 16 12 C 0.51 -11.76 7.91 87.66 0.69 -11.07 16 13 O -0.57 6.10 16.12 15.99 0.26 6.36 16 14 N -0.70 23.85 5.36 -440.03 -2.36 21.50 16 15 C 0.10 -3.58 4.21 45.52 0.19 -3.39 16 16 H 0.08 -2.36 7.50 -2.39 -0.02 -2.38 16 17 C -0.15 7.14 5.70 31.18 0.18 7.32 16 18 C -0.12 6.42 3.30 -10.21 -0.03 6.39 16 19 H 0.12 -6.83 8.10 -2.39 -0.02 -6.85 16 20 C 0.01 -0.78 4.57 86.30 0.39 -0.38 16 21 N -0.37 24.85 0.66 -948.88 -0.62 24.22 16 22 H 0.44 -30.72 8.40 -89.70 -0.75 -31.47 16 23 C -0.06 3.58 8.57 127.69 1.09 4.67 16 24 C -0.05 3.00 9.19 127.69 1.17 4.18 16 25 C -0.13 5.82 7.39 31.12 0.23 6.05 16 26 C -0.15 2.57 9.03 22.35 0.20 2.77 16 27 C -0.16 2.17 9.03 22.35 0.20 2.37 16 28 H 0.11 -1.79 8.14 -2.39 -0.02 -1.81 16 29 H 0.07 -1.21 7.66 -2.39 -0.02 -1.23 16 30 H 0.07 -1.28 7.66 -2.39 -0.02 -1.30 16 31 H 0.12 0.03 4.94 -2.91 -0.01 0.02 16 32 H 0.08 -0.64 7.82 -2.39 -0.02 -0.66 16 33 H 0.37 -2.92 8.60 -74.06 -0.64 -3.56 16 34 H -0.29 -0.30 6.80 99.48 0.68 0.38 16 35 H -0.27 0.86 7.11 99.48 0.71 1.57 16 36 H 0.12 -3.94 7.66 -2.39 -0.02 -3.96 16 37 H 0.12 -3.68 7.66 -2.39 -0.02 -3.70 16 38 H 0.42 -17.50 8.71 -92.71 -0.81 -18.31 16 39 H 0.07 -3.27 7.19 -2.39 -0.02 -3.29 16 40 H 0.11 -5.67 7.91 -2.39 -0.02 -5.69 16 41 H 0.14 -9.14 7.80 -2.39 -0.02 -9.16 16 42 H 0.15 -9.77 8.09 -2.39 -0.02 -9.79 16 43 H 0.12 -7.79 8.14 -2.39 -0.02 -7.81 16 44 H 0.11 -6.81 5.13 -2.39 -0.01 -6.82 16 45 H 0.12 -7.67 8.11 -2.39 -0.02 -7.69 16 46 H 0.13 -8.30 8.11 -2.38 -0.02 -8.32 16 47 H 0.12 -7.87 8.14 -2.39 -0.02 -7.89 16 48 H 0.12 -7.72 8.14 -2.38 -0.02 -7.74 16 49 H 0.12 -5.84 8.07 -2.39 -0.02 -5.86 16 50 H 0.08 -3.28 8.14 -2.39 -0.02 -3.30 16 51 H 0.18 -4.83 6.29 -2.91 -0.02 -4.85 16 52 H 0.17 -3.25 6.29 -2.91 -0.02 -3.27 16 Total: 1.00 -92.01 410.04 0.99 -91.02 By element: Atomic # 1 Polarization: -163.51 SS G_CDS: -1.24 Total: -164.74 kcal Atomic # 6 Polarization: 13.42 SS G_CDS: 6.36 Total: 19.78 kcal Atomic # 7 Polarization: 48.70 SS G_CDS: -2.98 Total: 45.72 kcal Atomic # 8 Polarization: 14.17 SS G_CDS: -3.24 Total: 10.92 kcal Atomic # 14 Polarization: -4.79 SS G_CDS: 2.09 Total: -2.70 kcal Total: -92.01 0.99 -91.02 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 113.335 kcal (2) G-P(sol) polarization free energy of solvation -92.006 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 21.329 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -91.020 kcal (6) G-S(sol) free energy of system = (1) + (5) 22.315 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds