Wall clock time and date at job start Sun Mar 7 2021 06:28:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35891 * 117.00396 * 2 1 4 4 C 1.38606 * 120.03114 * 180.02562 * 3 2 1 5 5 C 1.38662 * 119.89593 * 179.97438 * 4 3 2 6 6 O 1.35891 * 120.03210 * 180.02562 * 5 4 3 7 7 C 1.42904 * 116.99845 * 359.97438 * 6 5 4 8 8 C 1.50697 * 109.47160 * 180.02562 * 7 6 5 9 9 O 1.21279 * 120.00180 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99837 * 180.02562 * 8 7 6 11 11 C 1.46506 * 119.99641 * 180.02562 * 10 8 7 12 12 H 1.08995 * 112.85102 * 334.66645 * 11 10 8 13 13 C 1.53780 * 113.61264 * 105.86012 * 11 10 8 14 14 C 1.53957 * 87.01936 * 139.95116 * 13 11 10 15 15 H 1.09001 * 113.54020 * 89.18544 * 14 13 11 16 16 C 1.52998 * 113.74395 * 220.05631 * 14 13 11 17 17 N 1.46898 * 109.47436 * 272.59688 * 16 14 13 18 18 H 1.00906 * 109.46779 * 305.00395 * 17 16 14 19 19 C 1.46900 * 109.47202 * 64.99876 * 17 16 14 20 20 C 1.46895 * 109.47392 * 184.99827 * 17 16 14 21 21 C 1.53781 * 113.61075 * 203.46657 * 11 10 8 22 22 C 1.38753 * 119.94175 * 359.97438 * 5 4 3 23 23 C 1.50700 * 119.97354 * 180.02562 * 22 5 4 24 24 O 1.42896 * 109.47219 * 74.99672 * 23 22 5 25 25 Si 1.86303 * 109.46836 * 195.00095 * 23 22 5 26 26 C 1.38201 * 120.05496 * 0.02562 * 22 5 4 27 27 C 1.38160 * 120.11026 * 359.70189 * 26 22 5 28 28 H 1.09002 * 109.47382 * 179.97438 * 1 2 3 29 29 H 1.09001 * 109.46938 * 59.99709 * 1 2 3 30 30 H 1.09004 * 109.46926 * 299.99830 * 1 2 3 31 31 H 1.07998 * 120.05393 * 359.95736 * 4 3 2 32 32 H 1.08997 * 109.47765 * 300.00979 * 7 6 5 33 33 H 1.09006 * 109.46513 * 60.00515 * 7 6 5 34 34 H 0.96997 * 120.00645 * 359.97438 * 10 8 7 35 35 H 1.08999 * 113.61855 * 254.52845 * 13 11 10 36 36 H 1.09000 * 113.62001 * 25.43079 * 13 11 10 37 37 H 1.09004 * 109.47200 * 32.59651 * 16 14 13 38 38 H 1.08997 * 109.47540 * 152.59460 * 16 14 13 39 39 H 1.09007 * 109.47298 * 300.00280 * 19 17 16 40 40 H 1.09004 * 109.47192 * 59.99962 * 19 17 16 41 41 H 1.09004 * 109.47321 * 180.02562 * 19 17 16 42 42 H 1.08997 * 109.46985 * 60.00427 * 20 17 16 43 43 H 1.08999 * 109.47181 * 179.97438 * 20 17 16 44 44 H 1.08999 * 109.47641 * 299.99821 * 20 17 16 45 45 H 1.09000 * 113.61806 * 334.56857 * 21 11 10 46 46 H 1.08999 * 113.61118 * 105.39044 * 21 11 10 47 47 H 1.08997 * 109.46704 * 314.99398 * 23 22 5 48 48 H 0.96702 * 113.99986 * 60.00564 * 24 23 22 49 49 H 1.48504 * 109.99416 * 179.97438 * 25 23 22 50 50 H 1.48498 * 109.99788 * 301.31160 * 25 23 22 51 51 H 1.08003 * 119.94806 * 179.97438 * 26 22 5 52 52 H 1.07995 * 119.97710 * 180.29266 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4302 1.2839 -0.0005 5 6 4.0569 2.5209 -0.0011 6 8 5.4137 2.5959 -0.0021 7 6 6.1317 1.3603 -0.0021 8 6 7.6125 1.6399 -0.0027 9 8 8.0136 2.7844 -0.0026 10 7 8.4912 0.6179 -0.0032 11 6 9.9308 0.8897 -0.0033 12 1 10.1783 1.8605 -0.4326 13 6 10.6077 0.6250 1.3519 14 6 11.7847 0.0307 0.5571 15 1 12.5400 0.7668 0.2819 16 6 12.3836 -1.2266 1.1908 17 7 13.4165 -0.8412 2.1616 18 1 14.1008 -0.2536 1.7092 19 6 12.7957 -0.1050 3.2709 20 6 14.0740 -2.0474 2.6818 21 6 10.7758 -0.2658 -0.5650 22 6 3.2973 3.6821 -0.0016 23 6 3.9776 5.0267 -0.0028 24 8 4.5034 5.2934 -1.3044 25 14 2.7442 6.3471 0.4514 26 6 1.9174 3.6065 -0.0011 27 6 1.2906 2.3752 -0.0062 28 1 -0.3634 -1.0277 -0.0005 29 1 -0.3633 0.5139 -0.8900 30 1 -0.3633 0.5138 0.8900 31 1 4.0197 0.3790 -0.0003 32 1 5.8706 0.7883 0.8882 33 1 5.8693 0.7877 -0.8917 34 1 8.1705 -0.2975 -0.0029 35 1 10.8626 1.5334 1.8976 36 1 10.0827 -0.1060 1.9669 37 1 11.5985 -1.7867 1.6987 38 1 12.8289 -1.8482 0.4140 39 1 12.3077 0.7901 2.8849 40 1 12.0564 -0.7397 3.7596 41 1 13.5622 0.1814 3.9910 42 1 14.5347 -2.5937 1.8588 43 1 14.8407 -1.7614 3.4018 44 1 13.3349 -2.6822 3.1705 45 1 10.2969 -1.2409 -0.4752 46 1 11.1650 -0.0760 -1.5653 47 1 4.7902 5.0233 0.7237 48 1 3.8346 5.3115 -2.0027 49 1 3.4030 7.6780 0.4544 50 1 1.6153 6.3408 -0.5133 51 1 1.3278 4.5114 -0.0011 52 1 0.2122 2.3187 -0.0106 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:04 Heat of formation + Delta-G solvation = 24.791633 kcal Electronic energy + Delta-G solvation = -31384.604661 eV Core-core repulsion = 27050.428385 eV Total energy + Delta-G solvation = -4334.176276 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.25811 -41.84532 -40.95853 -40.00383 -39.07379 -38.32414 -37.04543 -34.82790 -32.35275 -31.54854 -30.46699 -29.52781 -29.14059 -28.38655 -26.72059 -26.17817 -25.79659 -24.24788 -23.25908 -22.53887 -21.74345 -20.99646 -20.01520 -19.09042 -18.63551 -18.15463 -18.11886 -17.78053 -17.55340 -17.39104 -17.23177 -16.71411 -16.63014 -16.53187 -16.09796 -16.04396 -15.62241 -15.49718 -15.22378 -14.77028 -14.55820 -14.50600 -13.93826 -13.80010 -13.60455 -13.55958 -13.49922 -13.41466 -13.37890 -13.29551 -13.18581 -13.08279 -12.85620 -12.51961 -12.37590 -12.33464 -12.06717 -11.81360 -11.70134 -11.68646 -11.51784 -11.03644 -10.57365 -10.16479 -9.74373 -9.14856 -4.97773 0.15647 0.26290 1.03223 1.27682 1.36083 1.44107 1.52035 1.92046 2.20774 2.51549 2.55121 2.89423 2.96655 3.19711 3.33055 3.44215 3.45393 3.52914 3.68096 3.70258 3.74935 3.77001 3.92134 3.96352 4.01357 4.02498 4.12816 4.15224 4.21384 4.30117 4.33331 4.36492 4.38477 4.40116 4.42368 4.47137 4.61298 4.67037 4.69425 4.74313 4.76335 4.76607 4.83837 4.88528 4.93060 4.96896 5.04854 5.13829 5.19052 5.24773 5.41338 5.48306 6.08694 6.30782 6.39983 6.50475 7.08053 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.012936 B = 0.002146 C = 0.001934 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2164.063605 B =13045.986829 C =14475.429272 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.328 6.328 3 C 0.164 3.836 4 C -0.248 4.248 5 C 0.181 3.819 6 O -0.303 6.303 7 C 0.027 3.973 8 C 0.515 3.485 9 O -0.569 6.569 10 N -0.700 5.700 11 C 0.094 3.906 12 H 0.080 0.920 13 C -0.152 4.152 14 C -0.117 4.117 15 H 0.124 0.876 16 C 0.013 3.987 17 N -0.370 5.370 18 H 0.438 0.562 19 C -0.057 4.057 20 C -0.046 4.046 21 C -0.125 4.125 22 C -0.195 4.195 23 C -0.068 4.068 24 O -0.549 6.549 25 Si 0.770 3.230 26 C -0.043 4.043 27 C -0.241 4.241 28 H 0.117 0.883 29 H 0.064 0.936 30 H 0.069 0.931 31 H 0.158 0.842 32 H 0.126 0.874 33 H 0.115 0.885 34 H 0.422 0.578 35 H 0.075 0.925 36 H 0.114 0.886 37 H 0.142 0.858 38 H 0.150 0.850 39 H 0.113 0.887 40 H 0.123 0.877 41 H 0.126 0.874 42 H 0.127 0.873 43 H 0.123 0.877 44 H 0.120 0.880 45 H 0.118 0.882 46 H 0.077 0.923 47 H 0.104 0.896 48 H 0.381 0.619 49 H -0.308 1.308 50 H -0.270 1.270 51 H 0.151 0.849 52 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 28.769 -21.371 10.778 37.424 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.241 6.241 3 C 0.118 3.882 4 C -0.267 4.267 5 C 0.134 3.866 6 O -0.215 6.215 7 C -0.051 4.051 8 C 0.301 3.699 9 O -0.447 6.447 10 N -0.354 5.354 11 C -0.010 4.010 12 H 0.098 0.902 13 C -0.190 4.190 14 C -0.136 4.136 15 H 0.142 0.858 16 C -0.109 4.109 17 N 0.053 4.947 18 H 0.275 0.725 19 C -0.200 4.200 20 C -0.188 4.188 21 C -0.164 4.164 22 C -0.197 4.197 23 C -0.176 4.176 24 O -0.356 6.356 25 Si 0.675 3.325 26 C -0.061 4.061 27 C -0.259 4.259 28 H 0.135 0.865 29 H 0.083 0.917 30 H 0.088 0.912 31 H 0.176 0.824 32 H 0.143 0.857 33 H 0.133 0.867 34 H 0.260 0.740 35 H 0.094 0.906 36 H 0.133 0.867 37 H 0.160 0.840 38 H 0.168 0.832 39 H 0.132 0.868 40 H 0.142 0.858 41 H 0.144 0.856 42 H 0.145 0.855 43 H 0.141 0.859 44 H 0.139 0.861 45 H 0.136 0.864 46 H 0.096 0.904 47 H 0.122 0.878 48 H 0.230 0.770 49 H -0.237 1.237 50 H -0.196 1.196 51 H 0.168 0.832 52 H 0.170 0.830 Dipole moment (debyes) X Y Z Total from point charges 29.232 -20.029 10.986 37.099 hybrid contribution -0.344 0.074 -1.628 1.666 sum 28.888 -19.955 9.357 36.335 Atomic orbital electron populations 1.23389 0.76096 1.05707 1.02582 1.86041 1.23601 1.26551 1.87907 1.18901 0.91888 0.84805 0.92641 1.20539 0.93079 0.97498 1.15604 1.18478 0.81839 0.92877 0.93389 1.86223 1.15242 1.31900 1.88121 1.22844 0.89209 0.86490 1.06518 1.20400 0.88385 0.85505 0.75653 1.90796 1.80660 1.23494 1.49779 1.45659 1.06051 1.09075 1.74606 1.22732 0.78206 1.00393 0.99688 0.90170 1.23895 0.96278 1.02618 0.96196 1.22716 0.96844 0.97374 0.96662 0.85834 1.23893 0.93641 0.98768 0.94626 1.44844 1.16918 1.17194 1.15748 0.72514 1.24275 1.04069 1.00964 0.90676 1.24126 1.02292 0.86830 1.05512 1.23329 0.95206 0.98754 0.99107 1.19566 0.93325 0.94134 1.12633 1.24989 1.05976 0.99256 0.87389 1.86631 1.38519 1.93072 1.17404 0.94203 0.75470 0.73972 0.88822 1.20938 0.92328 0.98663 0.94184 1.21400 1.01569 0.91487 1.11466 0.86492 0.91712 0.91202 0.82402 0.85659 0.86736 0.73981 0.90637 0.86725 0.84038 0.83202 0.86830 0.85837 0.85586 0.85457 0.85852 0.86136 0.86392 0.90424 0.87830 0.76993 1.23687 1.19646 0.83224 0.83012 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.30 9.81 113.37 1.11 0.82 16 2 O -0.33 4.08 10.49 -92.32 -0.97 3.11 16 3 C 0.16 -1.94 6.68 22.49 0.15 -1.79 16 4 C -0.25 3.27 8.97 22.46 0.20 3.48 16 5 C 0.18 -1.80 6.66 22.49 0.15 -1.65 16 6 O -0.30 2.74 8.99 -73.29 -0.66 2.08 16 7 C 0.03 -0.55 5.22 71.24 0.37 -0.17 16 8 C 0.51 -9.43 7.91 87.66 0.69 -8.74 16 9 O -0.57 3.25 16.12 16.01 0.26 3.50 16 10 N -0.70 21.34 5.36 -440.04 -2.36 18.98 16 11 C 0.09 -3.24 4.21 45.52 0.19 -3.05 16 12 H 0.08 -2.03 7.50 -2.39 -0.02 -2.05 16 13 C -0.15 6.78 5.70 31.18 0.18 6.95 16 14 C -0.12 6.16 3.30 -10.21 -0.03 6.13 16 15 H 0.12 -6.63 8.09 -2.39 -0.02 -6.64 16 16 C 0.01 -0.79 4.57 86.30 0.39 -0.39 16 17 N -0.37 24.44 0.66 -948.85 -0.62 23.81 16 18 H 0.44 -30.25 8.41 -89.69 -0.75 -31.01 16 19 C -0.06 3.53 8.57 127.69 1.09 4.63 16 20 C -0.05 2.95 9.19 127.69 1.17 4.12 16 21 C -0.13 5.53 7.39 31.12 0.23 5.76 16 22 C -0.20 1.84 5.27 -19.75 -0.10 1.73 16 23 C -0.07 0.51 2.37 71.24 0.17 0.68 16 24 O -0.55 1.98 12.88 -148.98 -1.92 0.06 16 25 Si 0.77 -8.29 30.24 68.60 2.07 -6.22 16 26 C -0.04 0.53 8.65 22.24 0.19 0.73 16 27 C -0.24 3.13 9.04 22.39 0.20 3.33 16 28 H 0.12 -2.44 8.14 -2.39 -0.02 -2.46 16 29 H 0.06 -1.22 7.65 -2.39 -0.02 -1.24 16 30 H 0.07 -1.37 7.67 -2.38 -0.02 -1.39 16 31 H 0.16 -3.01 6.30 -2.91 -0.02 -3.03 16 32 H 0.13 -3.36 7.66 -2.39 -0.02 -3.38 16 33 H 0.11 -2.79 7.66 -2.38 -0.02 -2.81 16 34 H 0.42 -16.04 8.71 -92.71 -0.81 -16.84 16 35 H 0.07 -3.13 7.19 -2.39 -0.02 -3.15 16 36 H 0.11 -5.50 7.91 -2.39 -0.02 -5.52 16 37 H 0.14 -8.98 7.80 -2.39 -0.02 -9.00 16 38 H 0.15 -9.63 8.09 -2.39 -0.02 -9.65 16 39 H 0.11 -6.60 5.13 -2.38 -0.01 -6.62 16 40 H 0.12 -7.57 8.11 -2.38 -0.02 -7.59 16 41 H 0.13 -7.72 8.14 -2.38 -0.02 -7.74 16 42 H 0.13 -8.19 8.11 -2.39 -0.02 -8.21 16 43 H 0.12 -7.80 8.14 -2.39 -0.02 -7.82 16 44 H 0.12 -7.64 8.14 -2.39 -0.02 -7.66 16 45 H 0.12 -5.62 8.07 -2.39 -0.02 -5.64 16 46 H 0.08 -3.10 8.14 -2.39 -0.02 -3.12 16 47 H 0.10 -0.61 7.82 -2.39 -0.02 -0.62 16 48 H 0.38 -3.88 8.70 -74.06 -0.64 -4.52 16 49 H -0.31 0.65 7.11 99.48 0.71 1.36 16 50 H -0.27 2.46 6.68 99.48 0.66 3.12 16 51 H 0.15 -2.29 4.85 -2.91 -0.01 -2.30 16 52 H 0.15 -2.59 6.29 -2.91 -0.02 -2.61 16 Total: 1.00 -91.16 410.52 0.91 -90.25 By element: Atomic # 1 Polarization: -156.88 SS G_CDS: -1.26 Total: -158.14 kcal Atomic # 6 Polarization: 16.20 SS G_CDS: 6.37 Total: 22.57 kcal Atomic # 7 Polarization: 45.77 SS G_CDS: -2.98 Total: 42.79 kcal Atomic # 8 Polarization: 12.04 SS G_CDS: -3.29 Total: 8.75 kcal Atomic # 14 Polarization: -8.29 SS G_CDS: 2.07 Total: -6.22 kcal Total: -91.16 0.91 -90.25 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 115.039 kcal (2) G-P(sol) polarization free energy of solvation -91.162 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 23.877 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.915 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.247 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.792 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds