Wall clock time and date at job start Sun Mar 7 2021 06:28:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00901 * 109.46964 * 2 1 4 4 C 1.46902 * 109.46808 * 119.99251 * 2 1 3 5 5 C 1.46894 * 109.47431 * 239.99176 * 2 1 3 6 6 C 1.53002 * 109.47340 * 174.99995 * 5 2 1 7 7 H 1.08996 * 112.84723 * 43.80848 * 6 5 2 8 8 C 1.53781 * 113.61609 * 175.00028 * 6 5 2 9 9 C 1.53781 * 87.08070 * 139.98229 * 8 6 5 10 10 H 1.09002 * 113.61445 * 89.11830 * 9 8 6 11 11 N 1.46497 * 113.61305 * 219.93536 * 9 8 6 12 12 C 1.34780 * 119.99653 * 203.46742 * 11 9 8 13 13 O 1.21685 * 120.00620 * 0.02562 * 12 11 9 14 14 C 1.46685 * 119.99491 * 180.02562 * 12 11 9 15 15 C 1.37871 * 126.22896 * 180.02562 * 14 12 11 16 16 C 1.39837 * 107.08596 * 180.02562 * 15 14 12 17 17 C 1.35453 * 107.86376 * 359.97438 * 16 15 14 18 18 C 1.50693 * 125.56475 * 180.02562 * 17 16 15 19 19 O 1.42901 * 109.47397 * 244.97704 * 18 17 16 20 20 Si 1.86304 * 109.47199 * 4.98241 * 18 17 16 21 21 N 1.35535 * 108.87232 * 359.73356 * 17 16 15 22 22 C 1.53786 * 87.17350 * 334.52830 * 9 8 6 23 23 H 1.09001 * 109.47072 * 180.02562 * 1 2 3 24 24 H 1.08995 * 109.47213 * 300.00823 * 1 2 3 25 25 H 1.08999 * 109.46744 * 60.00938 * 1 2 3 26 26 H 1.09007 * 109.47173 * 180.02562 * 4 2 1 27 27 H 1.08995 * 109.47173 * 299.99950 * 4 2 1 28 28 H 1.09001 * 109.47159 * 60.00232 * 4 2 1 29 29 H 1.08997 * 109.47139 * 54.99923 * 5 2 1 30 30 H 1.09006 * 109.47367 * 295.00353 * 5 2 1 31 31 H 1.08999 * 113.61181 * 25.43284 * 8 6 5 32 32 H 1.08998 * 113.61680 * 254.52836 * 8 6 5 33 33 H 0.96995 * 120.00146 * 23.47603 * 11 9 8 34 34 H 1.08005 * 126.45978 * 0.03798 * 15 14 12 35 35 H 1.08003 * 126.06908 * 179.97438 * 16 15 14 36 36 H 1.09001 * 109.47514 * 124.97887 * 18 17 16 37 37 H 0.96700 * 114.00184 * 179.97438 * 19 18 17 38 38 H 1.48499 * 109.99508 * 299.99402 * 20 18 17 39 39 H 1.48491 * 110.00065 * 61.31499 * 20 18 17 40 40 H 0.97001 * 125.68424 * 180.29824 * 21 17 16 41 41 H 1.08992 * 113.61675 * 140.02412 * 22 9 8 42 42 H 1.09000 * 113.60973 * 270.92699 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1996 5 6 1.9587 -0.6926 -1.1993 6 6 3.4836 -0.5847 -1.2637 7 1 3.9616 -0.7639 -0.3007 8 6 4.1093 -1.3824 -2.4200 9 6 5.0668 -0.1952 -2.6166 10 1 5.9787 -0.2668 -2.0237 11 7 5.3262 0.1228 -4.0230 12 6 6.4521 0.7778 -4.3691 13 8 7.2534 1.1047 -3.5137 14 6 6.7115 1.0966 -5.7772 15 6 7.8150 1.7579 -6.2731 16 6 7.6528 1.8459 -7.6592 17 6 6.4793 1.2497 -7.9789 18 6 5.9131 1.1184 -9.3692 19 8 4.7016 1.8705 -9.4632 20 14 7.1455 1.7690 -10.6057 21 7 5.9006 0.7847 -6.8449 22 6 3.9828 0.6872 -1.9753 23 1 -0.3633 -1.0277 0.0005 24 1 -0.3633 0.5139 0.8899 25 1 -0.3633 0.5137 -0.8901 26 1 3.0487 -0.6920 1.1999 27 1 1.5953 -0.1784 2.0894 28 1 1.5953 -1.7200 1.1997 29 1 1.5241 -0.2333 -2.0871 30 1 1.6704 -1.7429 -1.1555 31 1 3.4313 -1.5401 -3.2587 32 1 4.6081 -2.2971 -2.0997 33 1 4.6876 -0.1380 -4.7049 34 1 8.6480 2.1364 -5.6991 35 1 8.3409 2.3074 -8.3519 36 1 5.7065 0.0691 -9.5799 37 1 4.2811 1.8318 -10.3331 38 1 7.4355 3.1989 -10.3294 39 1 8.3984 0.9747 -10.5400 40 1 5.0546 0.3129 -6.7938 41 1 4.3794 1.4420 -1.2964 42 1 3.2703 1.0942 -2.6928 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_6580494.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:28 Heat of formation + Delta-G solvation = 106.656584 kcal Electronic energy + Delta-G solvation = -22002.933443 eV Core-core repulsion = 18683.546949 eV Total energy + Delta-G solvation = -3319.386494 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 281.165 amu Computer time = 0.57 seconds Orbital eigenvalues (eV) -42.72356 -42.15819 -40.68774 -39.06299 -37.66351 -34.97993 -32.42102 -31.69435 -30.10579 -29.41269 -27.17213 -26.91391 -25.74948 -24.23316 -22.78620 -21.76011 -21.54660 -20.89170 -19.58761 -19.32842 -18.49291 -17.95740 -17.46596 -17.09350 -16.69566 -16.50205 -16.16782 -15.81765 -15.41736 -15.24799 -14.94380 -14.55762 -14.41580 -13.98778 -13.85639 -13.61068 -13.59222 -13.55149 -13.45888 -13.29369 -13.21875 -12.99851 -12.76304 -12.31583 -12.11148 -11.83178 -11.58527 -11.39785 -10.50545 -10.34141 -10.29170 -9.45295 -4.97753 0.10499 0.99904 1.14641 1.29084 1.69017 1.81577 1.99378 2.05759 2.08799 2.88914 2.93400 3.11941 3.26160 3.35351 3.37910 3.62895 3.68100 3.74832 3.78333 3.82874 3.97594 4.10359 4.13561 4.22699 4.31676 4.34241 4.35386 4.47696 4.62366 4.64632 4.65369 4.73093 4.75452 4.80352 4.84486 4.85828 4.90704 4.99639 5.06648 5.34609 5.41859 5.52809 6.14014 6.33582 6.80103 6.91499 Molecular weight = 281.17amu Principal moments of inertia in cm(-1) A = 0.028481 B = 0.003298 C = 0.003057 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 982.882993 B = 8488.207466 C = 9157.458145 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.373 5.373 3 H 0.436 0.564 4 C -0.055 4.055 5 C 0.012 3.988 6 C -0.118 4.118 7 H 0.128 0.872 8 C -0.125 4.125 9 C 0.094 3.906 10 H 0.088 0.912 11 N -0.703 5.703 12 C 0.593 3.407 13 O -0.569 6.569 14 C -0.057 4.057 15 C -0.126 4.126 16 C -0.235 4.235 17 C 0.071 3.929 18 C -0.051 4.051 19 O -0.563 6.563 20 Si 0.795 3.205 21 N -0.500 5.500 22 C -0.153 4.153 23 H 0.122 0.878 24 H 0.123 0.877 25 H 0.125 0.875 26 H 0.119 0.881 27 H 0.126 0.874 28 H 0.124 0.876 29 H 0.145 0.855 30 H 0.146 0.854 31 H 0.115 0.885 32 H 0.082 0.918 33 H 0.412 0.588 34 H 0.142 0.858 35 H 0.135 0.865 36 H 0.112 0.888 37 H 0.411 0.589 38 H -0.303 1.303 39 H -0.296 1.296 40 H 0.435 0.565 41 H 0.074 0.926 42 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -24.617 -8.191 17.172 31.113 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.051 4.949 3 H 0.272 0.728 4 C -0.197 4.197 5 C -0.110 4.110 6 C -0.137 4.137 7 H 0.146 0.854 8 C -0.163 4.163 9 C -0.010 4.010 10 H 0.107 0.893 11 N -0.354 5.354 12 C 0.381 3.619 13 O -0.448 6.448 14 C -0.171 4.171 15 C -0.153 4.153 16 C -0.259 4.259 17 C -0.048 4.048 18 C -0.161 4.161 19 O -0.373 6.373 20 Si 0.701 3.299 21 N -0.099 5.099 22 C -0.192 4.192 23 H 0.141 0.859 24 H 0.142 0.858 25 H 0.144 0.856 26 H 0.137 0.863 27 H 0.144 0.856 28 H 0.143 0.857 29 H 0.163 0.837 30 H 0.164 0.836 31 H 0.134 0.866 32 H 0.100 0.900 33 H 0.249 0.751 34 H 0.160 0.840 35 H 0.152 0.848 36 H 0.129 0.871 37 H 0.264 0.736 38 H -0.231 1.231 39 H -0.223 1.223 40 H 0.276 0.724 41 H 0.093 0.907 42 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -23.423 -7.860 18.345 30.772 hybrid contribution 0.429 0.155 0.094 0.466 sum -22.993 -7.706 18.439 30.464 Atomic orbital electron populations 1.24138 0.75319 1.09661 1.09681 1.44816 1.16097 1.19306 1.14693 0.72813 1.24206 1.05669 1.02735 0.87113 1.23888 0.94535 1.03882 0.88670 1.22823 0.93930 0.96370 1.00576 0.85425 1.23335 0.97266 0.96641 0.99084 1.22814 0.98723 0.98686 0.80824 0.89345 1.45699 1.21319 1.57868 1.10544 1.17034 0.81976 0.77531 0.85335 1.90863 1.48062 1.55125 1.50782 1.20385 0.96439 1.12410 0.87904 1.21425 0.98432 1.01179 0.94220 1.20754 0.99872 1.09100 0.96173 1.20332 0.94635 1.01407 0.88474 1.24380 0.95655 1.01374 0.94703 1.86400 1.37492 1.72730 1.40722 0.94240 0.76142 0.75943 0.83560 1.41739 1.19724 1.44062 1.04336 1.23802 0.98115 0.97057 1.00196 0.85942 0.85802 0.85632 0.86304 0.85604 0.85700 0.83739 0.83594 0.86643 0.89972 0.75091 0.84022 0.84770 0.87061 0.73633 1.23125 1.22313 0.72408 0.90699 0.87237 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.97 9.19 127.69 1.17 4.14 16 2 N -0.37 24.54 0.66 -948.85 -0.62 23.92 16 3 H 0.44 -29.55 8.44 -89.69 -0.76 -30.31 16 4 C -0.06 3.45 8.97 127.69 1.15 4.60 16 5 C 0.01 -0.76 4.48 86.30 0.39 -0.37 16 6 C -0.12 6.22 3.58 -10.18 -0.04 6.18 16 7 H 0.13 -6.90 6.10 -2.39 -0.01 -6.91 16 8 C -0.12 5.50 7.39 31.12 0.23 5.73 16 9 C 0.09 -3.16 4.21 45.52 0.19 -2.97 16 10 H 0.09 -2.31 7.50 -2.39 -0.02 -2.32 16 11 N -0.70 19.71 5.36 -443.99 -2.38 17.33 16 12 C 0.59 -8.98 7.79 86.45 0.67 -8.31 16 13 O -0.57 3.23 16.50 -4.30 -0.07 3.16 16 14 C -0.06 0.75 7.06 40.35 0.28 1.03 16 15 C -0.13 0.90 10.65 22.57 0.24 1.14 16 16 C -0.23 1.88 9.32 22.01 0.21 2.08 16 17 C 0.07 -0.98 6.50 41.34 0.27 -0.71 16 18 C -0.05 1.01 3.07 71.23 0.22 1.23 16 19 O -0.56 11.82 12.86 -148.98 -1.92 9.90 16 20 Si 0.79 -13.59 30.56 68.60 2.10 -11.49 16 21 N -0.50 9.43 5.99 -171.93 -1.03 8.40 16 22 C -0.15 6.69 7.45 31.21 0.23 6.92 16 23 H 0.12 -7.77 8.14 -2.39 -0.02 -7.79 16 24 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 25 H 0.13 -8.03 8.11 -2.39 -0.02 -8.05 16 26 H 0.12 -7.26 6.10 -2.38 -0.01 -7.28 16 27 H 0.13 -7.82 8.14 -2.39 -0.02 -7.84 16 28 H 0.12 -7.79 8.11 -2.39 -0.02 -7.81 16 29 H 0.14 -9.21 7.79 -2.39 -0.02 -9.23 16 30 H 0.15 -9.26 8.09 -2.38 -0.02 -9.28 16 31 H 0.12 -5.47 8.07 -2.39 -0.02 -5.49 16 32 H 0.08 -3.35 8.14 -2.39 -0.02 -3.37 16 33 H 0.41 -14.30 7.84 -92.71 -0.73 -15.03 16 34 H 0.14 -0.86 8.06 -2.91 -0.02 -0.88 16 35 H 0.13 -0.96 6.19 -2.91 -0.02 -0.98 16 36 H 0.11 -2.91 7.96 -2.39 -0.02 -2.92 16 37 H 0.41 -12.64 8.74 -74.06 -0.65 -13.29 16 38 H -0.30 2.35 7.11 99.48 0.71 3.06 16 39 H -0.30 2.90 7.11 99.48 0.71 3.60 16 40 H 0.43 -11.99 8.19 -92.71 -0.76 -12.75 16 41 H 0.07 -3.00 8.14 -2.39 -0.02 -3.02 16 42 H 0.11 -5.04 7.90 -2.39 -0.02 -5.06 16 Total: 1.00 -88.36 339.71 -0.50 -88.86 By element: Atomic # 1 Polarization: -158.98 SS G_CDS: -1.80 Total: -160.77 kcal Atomic # 6 Polarization: 15.48 SS G_CDS: 5.22 Total: 20.70 kcal Atomic # 7 Polarization: 53.68 SS G_CDS: -4.03 Total: 49.64 kcal Atomic # 8 Polarization: 15.05 SS G_CDS: -1.99 Total: 13.06 kcal Atomic # 14 Polarization: -13.59 SS G_CDS: 2.10 Total: -11.49 kcal Total: -88.36 -0.50 -88.86 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_6580494.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.516 kcal (2) G-P(sol) polarization free energy of solvation -88.355 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.161 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.504 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.859 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.657 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.57 seconds