Wall clock time and date at job start Sun Mar 7 2021 06:28:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50702 * 1 3 3 C 1.33813 * 122.44514 * 2 1 4 4 C 1.50707 * 124.52432 * 0.05673 * 3 2 1 5 5 O 1.42904 * 109.46760 * 329.99272 * 4 3 2 6 6 Si 1.86303 * 109.46924 * 209.99452 * 4 3 2 7 7 S 1.70618 * 110.95523 * 180.02562 * 3 2 1 8 8 C 1.75832 * 91.56136 * 0.02562 * 7 3 2 9 9 C 1.46586 * 125.45704 * 179.97438 * 8 7 3 10 10 O 1.21704 * 119.99901 * 180.02562 * 9 8 7 11 11 N 1.34777 * 119.99956 * 0.03125 * 9 8 7 12 12 C 1.46496 * 119.99613 * 180.02562 * 11 9 8 13 13 H 1.08996 * 112.85193 * 336.18806 * 12 11 9 14 14 C 1.53778 * 113.61747 * 107.49997 * 12 11 9 15 15 C 1.53779 * 87.08440 * 139.97825 * 14 12 11 16 16 H 1.08997 * 113.69115 * 89.12922 * 15 14 12 17 17 C 1.53004 * 113.61525 * 220.02287 * 15 14 12 18 18 N 1.46899 * 109.46945 * 272.49647 * 17 15 14 19 19 H 1.00902 * 109.47255 * 305.00178 * 18 17 15 20 20 C 1.46898 * 109.47231 * 64.99744 * 18 17 15 21 21 C 1.46898 * 109.47284 * 184.99927 * 18 17 15 22 22 C 1.53782 * 87.08034 * 334.56570 * 15 14 12 23 23 C 1.36649 * 109.08368 * 0.26681 * 8 7 3 24 24 H 1.09002 * 109.47253 * 89.99608 * 1 2 3 25 25 H 1.09006 * 109.46596 * 209.99422 * 1 2 3 26 26 H 1.08993 * 109.47145 * 329.99053 * 1 2 3 27 27 H 1.08999 * 109.47281 * 89.99634 * 4 3 2 28 28 H 0.96697 * 113.99923 * 180.02562 * 5 4 3 29 29 H 1.48501 * 109.99854 * 59.99917 * 6 4 3 30 30 H 1.48499 * 110.00033 * 181.31340 * 6 4 3 31 31 H 0.96996 * 119.99871 * 359.97438 * 11 9 8 32 32 H 1.09001 * 113.61962 * 254.52804 * 14 12 11 33 33 H 1.09001 * 113.61446 * 25.43093 * 14 12 11 34 34 H 1.08997 * 109.47076 * 32.49226 * 17 15 14 35 35 H 1.08997 * 109.47474 * 152.49680 * 17 15 14 36 36 H 1.08997 * 109.46808 * 60.00315 * 20 18 17 37 37 H 1.09000 * 109.47198 * 180.02562 * 20 18 17 38 38 H 1.09000 * 109.47492 * 300.00018 * 20 18 17 39 39 H 1.09005 * 109.46979 * 60.00066 * 21 18 17 40 40 H 1.09000 * 109.47180 * 179.97438 * 21 18 17 41 41 H 1.08997 * 109.47305 * 300.00022 * 21 18 17 42 42 H 1.09000 * 113.62092 * 270.88492 * 22 15 14 43 43 H 1.09004 * 113.69179 * 139.99005 * 22 15 14 44 44 H 1.08001 * 123.35317 * 179.71560 * 23 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2249 1.1293 0.0000 4 6 1.6353 2.5162 0.0012 5 8 0.3747 2.4984 -0.6715 6 14 2.7917 3.6833 -0.8772 7 16 3.8969 0.7894 -0.0007 8 6 3.5937 -0.9426 -0.0018 9 6 4.6233 -1.9861 -0.0033 10 8 4.3003 -3.1595 -0.0045 11 7 5.9274 -1.6460 -0.0034 12 6 6.9562 -2.6889 -0.0055 13 1 6.5995 -3.6362 0.3987 14 6 7.6899 -2.8278 -1.3498 15 6 8.9794 -3.0270 -0.5360 16 1 9.1778 -4.0672 -0.2774 17 6 10.1975 -2.3210 -1.1350 18 7 10.8453 -3.2063 -2.1120 19 1 11.0666 -4.0873 -1.6726 20 6 9.9355 -3.4376 -3.2419 21 6 12.0806 -2.5779 -2.5987 22 6 8.2983 -2.2314 0.5900 23 6 2.2447 -1.1600 -0.0076 24 1 -0.3634 0.0001 -1.0277 25 1 -0.3633 -0.8901 0.5138 26 1 -0.3633 0.8898 0.5139 27 1 1.4940 2.8500 1.0292 28 1 -0.0632 3.3597 -0.7093 29 1 2.9927 3.2391 -2.2799 30 1 2.2367 5.0605 -0.8553 31 1 6.1847 -0.7108 -0.0028 32 1 7.3933 -3.7079 -1.9203 33 1 7.6863 -1.9150 -1.9456 34 1 9.8786 -1.4043 -1.6309 35 1 10.9035 -2.0779 -0.3410 36 1 9.6964 -2.4860 -3.7165 37 1 10.4160 -4.0949 -3.9666 38 1 9.0188 -3.9040 -2.8808 39 1 12.7557 -2.4063 -1.7602 40 1 12.5615 -3.2350 -3.3233 41 1 11.8416 -1.6263 -3.0733 42 1 8.4609 -1.1556 0.5246 43 1 8.4920 -2.6289 1.5863 44 1 1.8020 -2.1451 -0.0138 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_6739946.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:38 Heat of formation + Delta-G solvation = 120.745182 kcal Electronic energy + Delta-G solvation = -23703.720126 eV Core-core repulsion = 20255.758957 eV Total energy + Delta-G solvation = -3447.961168 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 312.142 amu Computer time = 0.56 seconds Orbital eigenvalues (eV) -44.53521 -42.24517 -40.92708 -40.14153 -38.24155 -35.94518 -33.18594 -32.17915 -31.96334 -30.89793 -28.60330 -28.31510 -27.38972 -25.73665 -24.72843 -22.88236 -22.66908 -21.48154 -20.78157 -20.26014 -20.06145 -19.74468 -19.29710 -18.43354 -18.12796 -17.67690 -17.27692 -17.01696 -16.88401 -16.48139 -16.30193 -15.97380 -15.89021 -15.76186 -15.58838 -15.39868 -15.27997 -15.23245 -15.14900 -14.85237 -14.68456 -14.19830 -13.87651 -13.83236 -13.61477 -13.54990 -13.26870 -13.24241 -12.86032 -12.73258 -12.08171 -11.56972 -11.35296 -10.39594 -10.12266 -5.94650 -1.46162 -1.39993 -0.50792 -0.09160 0.29632 0.46681 0.52886 0.59108 0.68948 0.77915 0.93600 1.13958 1.23820 1.32004 1.41178 1.62217 1.66413 1.77733 1.85160 1.94392 2.01459 2.14432 2.18478 2.27533 2.30251 2.35239 2.38975 2.75257 2.88347 2.90450 2.97167 3.02662 3.16518 3.32582 3.40762 3.54216 3.61148 3.68352 3.92250 4.10869 4.19033 4.27832 4.36144 4.72107 4.83069 5.25790 5.59977 6.08339 Molecular weight = 312.14amu Principal moments of inertia in cm(-1) A = 0.020315 B = 0.003159 C = 0.002884 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1377.932321 B = 8860.853416 C = 9707.137523 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.089 4.089 2 C -0.091 4.091 3 C -0.185 4.185 4 C -0.037 4.037 5 O -0.523 6.523 6 Si 0.659 3.341 7 S 0.198 5.802 8 C -0.278 4.278 9 C 0.600 3.400 10 O -0.520 6.520 11 N -0.723 5.723 12 C 0.131 3.869 13 H 0.126 0.874 14 C -0.162 4.162 15 C -0.143 4.143 16 H 0.118 0.882 17 C 0.002 3.998 18 N -0.386 5.386 19 H 0.427 0.573 20 C -0.056 4.056 21 C -0.048 4.048 22 C -0.133 4.133 23 C -0.037 4.037 24 H 0.073 0.927 25 H 0.062 0.938 26 H 0.080 0.920 27 H 0.090 0.910 28 H 0.385 0.615 29 H -0.243 1.243 30 H -0.240 1.240 31 H 0.401 0.599 32 H 0.087 0.913 33 H 0.097 0.903 34 H 0.130 0.870 35 H 0.134 0.866 36 H 0.121 0.879 37 H 0.123 0.877 38 H 0.127 0.873 39 H 0.123 0.877 40 H 0.124 0.876 41 H 0.121 0.879 42 H 0.099 0.901 43 H 0.094 0.906 44 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 28.178 -6.133 -5.395 29.338 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.148 4.148 2 C -0.103 4.103 3 C -0.304 4.304 4 C -0.148 4.148 5 O -0.332 6.332 6 Si 0.557 3.443 7 S 0.465 5.535 8 C -0.397 4.397 9 C 0.388 3.612 10 O -0.397 6.397 11 N -0.375 5.375 12 C 0.025 3.975 13 H 0.144 0.856 14 C -0.201 4.201 15 C -0.162 4.162 16 H 0.136 0.864 17 C -0.119 4.119 18 N 0.039 4.961 19 H 0.262 0.738 20 C -0.198 4.198 21 C -0.190 4.190 22 C -0.171 4.171 23 C -0.070 4.070 24 H 0.092 0.908 25 H 0.081 0.919 26 H 0.098 0.902 27 H 0.108 0.892 28 H 0.234 0.766 29 H -0.167 1.167 30 H -0.163 1.163 31 H 0.237 0.763 32 H 0.106 0.894 33 H 0.116 0.884 34 H 0.149 0.851 35 H 0.152 0.848 36 H 0.140 0.860 37 H 0.142 0.858 38 H 0.145 0.855 39 H 0.142 0.858 40 H 0.143 0.857 41 H 0.140 0.860 42 H 0.118 0.882 43 H 0.113 0.887 44 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 29.457 -5.881 -6.257 30.683 hybrid contribution -2.343 -0.265 -0.019 2.358 sum 27.114 -6.145 -6.276 28.501 Atomic orbital electron populations 1.20550 0.88366 1.02815 1.03024 1.18759 0.98821 0.90477 1.02227 1.23300 0.98033 0.98760 1.10300 1.24080 0.91700 0.97338 1.01696 1.86678 1.31498 1.35845 1.79156 0.95819 0.85812 0.79072 0.83620 1.82413 1.02806 0.98281 1.69957 1.24418 0.97790 0.96773 1.20726 1.16974 0.81499 0.87473 0.75285 1.90883 1.81498 1.18261 1.49064 1.45736 1.05237 1.09643 1.76865 1.22338 0.85948 0.93823 0.95350 0.85621 1.23923 0.93839 1.03946 0.98380 1.22938 0.91949 1.01593 0.99754 0.86369 1.24077 0.98629 0.95448 0.93759 1.45078 1.15933 1.18532 1.16579 0.73772 1.24323 0.97223 1.08732 0.89513 1.24140 0.85163 1.03743 1.05937 1.23378 0.93977 1.01151 0.98620 1.20770 0.90938 1.00257 0.95070 0.90787 0.91910 0.90160 0.89191 0.76581 1.16657 1.16304 0.76349 0.89414 0.88412 0.85147 0.84838 0.86004 0.85814 0.85467 0.85812 0.85721 0.86008 0.88236 0.88724 0.82620 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 0.61 8.70 36.01 0.31 0.93 16 2 C -0.09 0.63 5.75 -106.45 -0.61 0.02 16 3 C -0.19 1.53 5.57 -35.86 -0.20 1.33 16 4 C -0.04 0.34 2.75 36.01 0.10 0.44 16 5 O -0.52 4.31 9.81 -35.23 -0.35 3.96 16 6 Si 0.66 -6.58 31.31 -169.99 -5.32 -11.91 16 7 S 0.20 -2.23 19.80 -107.50 -2.13 -4.35 16 8 C -0.28 2.50 6.45 -36.79 -0.24 2.26 16 9 C 0.60 -5.83 7.78 -12.89 -0.10 -5.93 16 10 O -0.52 3.01 16.44 5.18 0.09 3.10 16 11 N -0.72 10.86 5.35 -54.35 -0.29 10.57 16 12 C 0.13 -2.39 4.24 -67.12 -0.28 -2.68 16 13 H 0.13 -1.96 7.46 -51.93 -0.39 -2.35 16 14 C -0.16 3.71 5.69 -25.92 -0.15 3.57 16 15 C -0.14 3.81 3.31 -89.81 -0.30 3.51 16 16 H 0.12 -3.23 8.09 -51.93 -0.42 -3.65 16 17 C 0.00 -0.07 4.57 -3.82 -0.02 -0.09 16 18 N -0.39 12.66 0.66 -251.26 -0.17 12.49 16 19 H 0.43 -14.72 8.40 -39.29 -0.33 -15.05 16 20 C -0.06 1.73 8.57 60.06 0.51 2.25 16 21 C -0.05 1.53 9.19 60.06 0.55 2.09 16 22 C -0.13 2.97 7.39 -25.92 -0.19 2.78 16 23 C -0.04 0.26 9.80 -40.44 -0.40 -0.13 16 24 H 0.07 -0.46 8.14 -51.93 -0.42 -0.89 16 25 H 0.06 -0.46 8.13 -51.93 -0.42 -0.88 16 26 H 0.08 -0.54 6.41 -51.93 -0.33 -0.87 16 27 H 0.09 -0.97 7.96 -51.93 -0.41 -1.39 16 28 H 0.38 -4.51 8.74 45.56 0.40 -4.11 16 29 H -0.24 1.65 7.11 56.52 0.40 2.06 16 30 H -0.24 1.84 7.11 56.52 0.40 2.25 16 31 H 0.40 -6.91 7.84 -40.82 -0.32 -7.23 16 32 H 0.09 -1.94 7.18 -51.93 -0.37 -2.31 16 33 H 0.10 -2.30 7.90 -51.93 -0.41 -2.71 16 34 H 0.13 -4.01 7.79 -51.93 -0.40 -4.41 16 35 H 0.13 -4.16 8.09 -51.93 -0.42 -4.58 16 36 H 0.12 -3.72 8.11 -51.93 -0.42 -4.15 16 37 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 38 H 0.13 -3.78 5.13 -51.93 -0.27 -4.04 16 39 H 0.12 -3.93 8.11 -51.93 -0.42 -4.36 16 40 H 0.12 -3.94 8.14 -51.93 -0.42 -4.36 16 41 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 42 H 0.10 -2.31 8.08 -51.93 -0.42 -2.73 16 43 H 0.09 -1.99 8.14 -51.93 -0.42 -2.42 16 44 H 0.16 -1.12 8.06 -52.49 -0.42 -1.54 16 LS Contribution 359.54 15.07 5.42 5.42 Total: 1.00 -37.76 359.54 -10.85 -48.61 By element: Atomic # 1 Polarization: -71.13 SS G_CDS: -7.10 Total: -78.23 kcal Atomic # 6 Polarization: 11.34 SS G_CDS: -1.00 Total: 10.34 kcal Atomic # 7 Polarization: 23.52 SS G_CDS: -0.46 Total: 23.06 kcal Atomic # 8 Polarization: 7.32 SS G_CDS: -0.26 Total: 7.06 kcal Atomic # 14 Polarization: -6.58 SS G_CDS: -5.32 Total: -11.91 kcal Atomic # 16 Polarization: -2.23 SS G_CDS: -2.13 Total: -4.35 kcal Total LS contribution 5.42 Total: 5.42 kcal Total: -37.76 -10.85 -48.61 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_6739946.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 169.356 kcal (2) G-P(sol) polarization free energy of solvation -37.759 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 131.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.852 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.611 kcal (6) G-S(sol) free energy of system = (1) + (5) 120.745 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.56 seconds