Wall clock time and date at job start Sun Mar 7 2021 06:28:42 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00895 * 109.46903 * 2 1 4 4 C 1.46896 * 109.47078 * 120.00704 * 2 1 3 5 5 C 1.46907 * 109.46659 * 240.00288 * 2 1 3 6 6 C 1.52995 * 109.46632 * 175.00157 * 5 2 1 7 7 H 1.08997 * 112.91150 * 43.74948 * 6 5 2 8 8 C 1.53791 * 113.60994 * 174.99997 * 6 5 2 9 9 C 1.53786 * 87.07966 * 139.97886 * 8 6 5 10 10 H 1.08998 * 113.60870 * 89.19954 * 9 8 6 11 11 N 1.46499 * 113.61394 * 220.01815 * 9 8 6 12 12 C 1.34777 * 119.99665 * 205.27970 * 11 9 8 13 13 O 1.21633 * 120.00238 * 359.72097 * 12 11 9 14 14 C 1.47191 * 119.99772 * 179.72411 * 12 11 9 15 15 C 1.36005 * 123.46022 * 359.70370 * 14 12 11 16 16 S 1.70452 * 110.81730 * 179.89235 * 15 14 12 17 17 C 1.75500 * 92.44156 * 0.31737 * 16 15 14 18 18 C 1.50703 * 124.70831 * 179.85661 * 17 16 15 19 19 O 1.42901 * 109.47180 * 244.95657 * 18 17 16 20 20 Si 1.86298 * 109.47344 * 4.95626 * 18 17 16 21 21 C 1.32768 * 110.58127 * 359.81850 * 17 16 15 22 22 C 1.53778 * 87.08287 * 334.56878 * 9 8 6 23 23 H 1.08997 * 109.47260 * 180.02562 * 1 2 3 24 24 H 1.09002 * 109.46593 * 299.99852 * 1 2 3 25 25 H 1.08995 * 109.47315 * 59.99130 * 1 2 3 26 26 H 1.08997 * 109.47759 * 59.99468 * 4 2 1 27 27 H 1.09003 * 109.46822 * 179.97438 * 4 2 1 28 28 H 1.09002 * 109.46955 * 299.99223 * 4 2 1 29 29 H 1.09000 * 109.46946 * 55.00243 * 5 2 1 30 30 H 1.09005 * 109.46939 * 295.00038 * 5 2 1 31 31 H 1.08999 * 113.61698 * 25.43239 * 8 6 5 32 32 H 1.09001 * 113.60977 * 254.52695 * 8 6 5 33 33 H 0.97001 * 119.99790 * 24.99683 * 11 9 8 34 34 H 1.08008 * 124.59385 * 359.97438 * 15 14 12 35 35 H 1.09000 * 109.47150 * 124.96305 * 18 17 16 36 36 H 0.96708 * 113.99918 * 60.00126 * 19 18 17 37 37 H 1.48503 * 109.99947 * 58.68110 * 20 18 17 38 38 H 1.48500 * 110.00073 * 179.97438 * 20 18 17 39 39 H 1.07994 * 123.46287 * 179.97438 * 21 17 16 40 40 H 1.08997 * 113.61721 * 139.97826 * 22 9 8 41 41 H 1.09004 * 113.61436 * 270.88721 * 22 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 1.1993 5 6 1.9586 -0.6925 -1.1996 6 6 3.4834 -0.5846 -1.2640 7 1 3.9625 -0.7628 -0.3013 8 6 4.1090 -1.3821 -2.4205 9 6 5.0666 -0.1949 -2.6171 10 1 5.9791 -0.2675 -2.0253 11 7 5.3243 0.1245 -4.0234 12 6 6.4669 0.7472 -4.3745 13 8 7.2818 1.0484 -3.5232 14 6 6.7286 1.0627 -5.7882 15 6 5.8704 0.7534 -6.7969 16 16 6.4908 1.2672 -8.2990 17 6 7.9488 1.9086 -7.5623 18 6 9.0705 2.5740 -8.3174 19 8 10.2545 1.7814 -8.2076 20 14 8.5986 2.7397 -10.1120 21 6 7.9260 1.7271 -6.2473 22 6 3.9817 0.6852 -1.9743 23 1 -0.3633 -1.0276 0.0005 24 1 -0.3632 0.5138 0.8900 25 1 -0.3633 0.5139 -0.8898 26 1 1.5953 -1.7202 1.1993 27 1 3.0487 -0.6930 1.1991 28 1 1.5954 -0.1788 2.0894 29 1 1.5240 -0.2329 -2.0872 30 1 1.6702 -1.7428 -1.1559 31 1 3.4310 -1.5397 -3.2593 32 1 4.6077 -2.2970 -2.1004 33 1 4.6745 -0.1158 -4.7023 34 1 4.9233 0.2515 -6.6639 35 1 9.2550 3.5627 -7.8974 36 1 10.1631 0.8865 -8.5624 37 1 7.3509 3.5352 -10.2376 38 1 9.6963 3.3950 -10.8675 39 1 8.7212 2.0434 -5.5886 40 1 4.3775 1.4392 -1.2939 41 1 3.2687 1.0928 -2.6910 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_6894386.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:42 Heat of formation + Delta-G solvation = 122.111652 kcal Electronic energy + Delta-G solvation = -21589.508902 eV Core-core repulsion = 18297.144607 eV Total energy + Delta-G solvation = -3292.364295 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 298.126 amu Computer time = 0.48 seconds Orbital eigenvalues (eV) -44.51860 -42.34959 -40.83539 -39.43630 -37.83141 -35.96936 -32.88697 -32.00436 -31.88568 -28.74672 -28.21443 -27.73071 -26.97936 -25.10756 -22.98260 -22.73559 -21.75866 -21.32427 -20.29668 -19.79855 -19.63358 -19.06082 -18.48367 -18.15191 -17.85892 -17.30710 -16.90667 -16.66142 -16.46242 -16.33078 -16.04093 -15.99395 -15.84071 -15.73122 -15.39563 -15.30351 -15.11770 -14.87730 -14.77749 -14.44206 -14.34260 -14.05394 -13.55586 -13.37651 -13.27346 -12.88879 -12.66161 -11.87546 -11.35131 -11.26755 -10.81452 -10.32326 -5.82611 -1.50402 -1.20993 -0.44655 -0.07764 0.05470 0.43116 0.49668 0.52468 0.68489 0.92156 0.94864 1.24846 1.28911 1.33597 1.40784 1.59510 1.65541 1.71299 1.76247 1.86864 2.06175 2.12330 2.16843 2.20212 2.26909 2.34988 2.60740 2.81056 2.83301 2.88908 2.97607 3.01514 3.09824 3.18830 3.30205 3.43815 3.62622 3.72885 3.87256 4.19048 4.27468 4.42974 5.29945 5.83020 6.14718 Molecular weight = 298.13amu Principal moments of inertia in cm(-1) A = 0.037911 B = 0.002786 C = 0.002683 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 738.401650 B =10047.897928 C =10432.601407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.053 4.053 5 C 0.003 3.997 6 C -0.147 4.147 7 H 0.119 0.881 8 C -0.132 4.132 9 C 0.131 3.869 10 H 0.125 0.875 11 N -0.722 5.722 12 C 0.584 3.416 13 O -0.525 6.525 14 C -0.162 4.162 15 C -0.210 4.210 16 S 0.211 5.789 17 C -0.239 4.239 18 C -0.027 4.027 19 O -0.531 6.531 20 Si 0.655 3.345 21 C -0.056 4.056 22 C -0.161 4.161 23 H 0.122 0.878 24 H 0.125 0.875 25 H 0.123 0.877 26 H 0.123 0.877 27 H 0.124 0.876 28 H 0.125 0.875 29 H 0.131 0.869 30 H 0.132 0.868 31 H 0.098 0.902 32 H 0.093 0.907 33 H 0.401 0.599 34 H 0.169 0.831 35 H 0.126 0.874 36 H 0.382 0.618 37 H -0.237 1.237 38 H -0.230 1.230 39 H 0.157 0.843 40 H 0.086 0.914 41 H 0.096 0.904 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -23.874 -7.862 18.585 31.260 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.037 4.963 3 H 0.262 0.738 4 C -0.194 4.194 5 C -0.119 4.119 6 C -0.166 4.166 7 H 0.137 0.863 8 C -0.171 4.171 9 C 0.025 3.975 10 H 0.142 0.858 11 N -0.374 5.374 12 C 0.370 3.630 13 O -0.401 6.401 14 C -0.181 4.181 15 C -0.348 4.348 16 S 0.478 5.522 17 C -0.355 4.355 18 C -0.141 4.141 19 O -0.337 6.337 20 Si 0.554 3.446 21 C -0.085 4.085 22 C -0.200 4.200 23 H 0.141 0.859 24 H 0.143 0.857 25 H 0.141 0.859 26 H 0.142 0.858 27 H 0.143 0.857 28 H 0.143 0.857 29 H 0.149 0.851 30 H 0.150 0.850 31 H 0.116 0.884 32 H 0.112 0.888 33 H 0.237 0.763 34 H 0.186 0.814 35 H 0.143 0.857 36 H 0.229 0.771 37 H -0.161 1.161 38 H -0.152 1.152 39 H 0.174 0.826 40 H 0.105 0.895 41 H 0.114 0.886 Dipole moment (debyes) X Y Z Total from point charges -23.815 -6.870 17.289 30.220 hybrid contribution 0.108 0.359 1.789 1.828 sum -23.706 -6.512 19.078 31.119 Atomic orbital electron populations 1.24145 0.75538 1.09651 1.09614 1.45032 1.16255 1.19084 1.15896 0.73756 1.24203 1.06048 1.02474 0.86723 1.24074 0.98038 1.02479 0.87297 1.23024 0.90722 1.00950 1.01878 0.86322 1.23381 0.98231 0.98719 0.96760 1.22302 0.98115 0.93757 0.83278 0.85754 1.45732 1.21678 1.61594 1.08416 1.17702 0.80894 0.76765 0.87617 1.90851 1.45619 1.52128 1.51543 1.20128 0.97035 1.07841 0.93084 1.25776 1.04406 1.05789 0.98824 1.83258 1.11090 1.51484 1.06385 1.24882 1.02000 1.10508 0.98150 1.24470 0.84307 0.96273 1.09021 1.86572 1.32433 1.29161 1.85528 0.95193 0.82656 0.90673 0.76086 1.21051 0.96549 0.96744 0.94149 1.23814 0.99732 0.96237 1.00187 0.85917 0.85667 0.85879 0.85840 0.85735 0.85659 0.85105 0.84964 0.88375 0.88841 0.76325 0.81367 0.85708 0.77074 1.16116 1.15236 0.82564 0.89529 0.88584 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.52 9.19 60.07 0.55 2.07 16 2 N -0.39 12.68 0.66 -251.26 -0.17 12.52 16 3 H 0.43 -14.48 8.44 -39.29 -0.33 -14.81 16 4 C -0.05 1.66 8.98 60.06 0.54 2.20 16 5 C 0.00 -0.08 4.48 -3.82 -0.02 -0.10 16 6 C -0.15 3.88 3.58 -89.80 -0.32 3.56 16 7 H 0.12 -3.23 6.10 -51.93 -0.32 -3.55 16 8 C -0.13 2.96 7.39 -25.91 -0.19 2.77 16 9 C 0.13 -2.39 4.24 -67.12 -0.28 -2.67 16 10 H 0.12 -1.91 7.46 -51.93 -0.39 -2.30 16 11 N -0.72 11.09 5.32 -54.16 -0.29 10.80 16 12 C 0.58 -5.79 7.79 -12.62 -0.10 -5.89 16 13 O -0.53 2.93 16.39 5.25 0.09 3.02 16 14 C -0.16 1.57 5.98 -104.63 -0.63 0.95 16 15 C -0.21 2.56 10.38 29.93 0.31 2.87 16 16 S 0.21 -2.31 20.20 -107.50 -2.17 -4.48 16 17 C -0.24 2.10 5.65 -36.18 -0.20 1.90 16 18 C -0.03 0.23 2.94 36.01 0.11 0.33 16 19 O -0.53 3.86 12.88 -35.23 -0.45 3.40 16 20 Si 0.65 -5.69 30.92 -169.99 -5.26 -10.94 16 21 C -0.06 0.44 9.95 -39.02 -0.39 0.05 16 22 C -0.16 3.63 7.43 -25.92 -0.19 3.44 16 23 H 0.12 -3.87 8.14 -51.93 -0.42 -4.29 16 24 H 0.12 -3.96 8.14 -51.93 -0.42 -4.39 16 25 H 0.12 -3.90 8.11 -51.93 -0.42 -4.33 16 26 H 0.12 -3.85 8.11 -51.93 -0.42 -4.27 16 27 H 0.12 -3.84 6.10 -51.93 -0.32 -4.16 16 28 H 0.12 -3.93 8.14 -51.93 -0.42 -4.35 16 29 H 0.13 -4.04 7.79 -51.93 -0.40 -4.45 16 30 H 0.13 -4.08 8.09 -51.93 -0.42 -4.50 16 31 H 0.10 -2.28 8.08 -51.93 -0.42 -2.70 16 32 H 0.09 -1.96 8.14 -51.93 -0.42 -2.39 16 33 H 0.40 -7.23 7.22 -40.82 -0.29 -7.52 16 34 H 0.17 -2.70 7.01 -52.48 -0.37 -3.07 16 35 H 0.13 -0.99 7.96 -51.93 -0.41 -1.40 16 36 H 0.38 -4.27 8.70 45.56 0.40 -3.88 16 37 H -0.24 1.65 7.11 56.52 0.40 2.05 16 38 H -0.23 1.19 7.11 56.52 0.40 1.59 16 39 H 0.16 -1.02 8.06 -52.49 -0.42 -1.44 16 40 H 0.09 -1.84 8.14 -51.93 -0.42 -2.27 16 41 H 0.10 -2.22 7.90 -51.93 -0.41 -2.63 16 LS Contribution 344.41 15.07 5.19 5.19 Total: 1.00 -37.92 344.41 -10.14 -48.06 By element: Atomic # 1 Polarization: -72.78 SS G_CDS: -6.26 Total: -79.05 kcal Atomic # 6 Polarization: 12.29 SS G_CDS: -0.82 Total: 11.48 kcal Atomic # 7 Polarization: 23.78 SS G_CDS: -0.45 Total: 23.32 kcal Atomic # 8 Polarization: 6.79 SS G_CDS: -0.37 Total: 6.42 kcal Atomic # 14 Polarization: -5.69 SS G_CDS: -5.26 Total: -10.94 kcal Atomic # 16 Polarization: -2.31 SS G_CDS: -2.17 Total: -4.48 kcal Total LS contribution 5.19 Total: 5.19 kcal Total: -37.92 -10.14 -48.06 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_6894386.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 170.169 kcal (2) G-P(sol) polarization free energy of solvation -37.920 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 132.249 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.137 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -48.058 kcal (6) G-S(sol) free energy of system = (1) + (5) 122.112 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.48 seconds