Wall clock time and date at job start Sun Mar 7 2021 06:28:51 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.37938 * 120.07778 * 2 1 4 4 C 1.38374 * 120.14835 * 180.27495 * 3 2 1 5 5 C 1.50701 * 119.85704 * 179.76073 * 4 3 2 6 6 C 1.38336 * 120.29436 * 359.48638 * 4 3 2 7 7 C 1.50699 * 119.93378 * 180.25354 * 6 4 3 8 8 O 1.42906 * 109.46705 * 74.99752 * 7 6 4 9 9 Si 1.86297 * 109.47475 * 194.99619 * 7 6 4 10 10 C 1.37981 * 120.14072 * 0.23026 * 6 4 3 11 11 C 1.39551 * 119.85541 * 0.02698 * 10 6 4 12 12 C 1.47843 * 120.14673 * 179.97438 * 11 10 6 13 13 O 1.21550 * 120.00081 * 173.74520 * 12 11 10 14 14 N 1.34778 * 120.00248 * 353.74622 * 12 11 10 15 15 C 1.46497 * 120.00394 * 179.97438 * 14 12 11 16 16 H 1.09003 * 112.85151 * 336.20374 * 15 14 12 17 17 C 1.53783 * 113.61255 * 107.50364 * 15 14 12 18 18 C 1.53775 * 87.08338 * 139.98148 * 17 15 14 19 19 H 1.08997 * 113.68850 * 89.12682 * 18 17 15 20 20 C 1.52995 * 113.61946 * 220.02089 * 18 17 15 21 21 N 1.46906 * 109.47321 * 272.49969 * 20 18 17 22 22 H 1.00901 * 109.46682 * 305.00118 * 21 20 18 23 23 C 1.46897 * 109.47037 * 64.99602 * 21 20 18 24 24 C 1.46894 * 109.47142 * 184.99849 * 21 20 18 25 25 C 1.53780 * 113.61580 * 205.00082 * 15 14 12 26 26 H 1.09000 * 109.47506 * 263.67286 * 1 2 3 27 27 H 1.09005 * 109.47032 * 23.67121 * 1 2 3 28 28 H 1.09002 * 109.46841 * 143.66473 * 1 2 3 29 29 H 1.08005 * 119.92488 * 0.02562 * 3 2 1 30 30 H 1.09005 * 109.46976 * 269.72792 * 5 4 3 31 31 H 1.09000 * 109.46922 * 29.72149 * 5 4 3 32 32 H 1.09005 * 109.47522 * 149.72402 * 5 4 3 33 33 H 1.09003 * 109.47171 * 315.00054 * 7 6 4 34 34 H 0.96693 * 114.00080 * 60.00820 * 8 7 6 35 35 H 1.48503 * 109.99954 * 179.97438 * 9 7 6 36 36 H 1.48498 * 110.00379 * 301.32233 * 9 7 6 37 37 H 1.08001 * 120.07364 * 179.97438 * 10 6 4 38 38 H 0.97006 * 119.99287 * 0.02562 * 14 12 11 39 39 H 1.08997 * 113.61980 * 254.53497 * 17 15 14 40 40 H 1.09002 * 113.61170 * 25.43518 * 17 15 14 41 41 H 1.09003 * 109.47245 * 32.49338 * 20 18 17 42 42 H 1.09001 * 109.47610 * 152.49629 * 20 18 17 43 43 H 1.09001 * 109.47316 * 60.00086 * 23 21 20 44 44 H 1.09000 * 109.47104 * 180.02562 * 23 21 20 45 45 H 1.09010 * 109.47351 * 300.00300 * 23 21 20 46 46 H 1.08998 * 109.47460 * 59.99687 * 24 21 20 47 47 H 1.09004 * 109.46960 * 180.02562 * 24 21 20 48 48 H 1.09001 * 109.46883 * 299.99714 * 24 21 20 49 49 H 1.08997 * 113.61755 * 334.57003 * 25 15 14 50 50 H 1.08997 * 113.61325 * 105.39057 * 25 15 14 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1983 1.1936 0.0000 4 6 3.5820 1.1953 -0.0057 5 6 4.3306 2.5033 -0.0112 6 6 4.2813 0.0018 -0.0008 7 6 5.7883 0.0132 -0.0013 8 8 6.2623 0.3711 1.2984 9 14 6.4220 -1.6806 -0.4487 10 6 3.6020 -1.1992 0.0051 11 6 2.2065 -1.2080 0.0055 12 6 1.4722 -2.4912 0.0112 13 8 0.2621 -2.4984 0.1263 14 7 2.1443 -3.6529 -0.1111 15 6 1.4167 -4.9244 -0.1049 16 1 0.4522 -4.8577 0.3985 17 6 1.3485 -5.6019 -1.4837 18 6 1.5780 -6.9352 -0.7528 19 1 0.6578 -7.4201 -0.4272 20 6 2.5207 -7.8858 -1.4933 21 7 1.7490 -8.7008 -2.4413 22 1 1.0050 -9.1735 -1.9503 23 6 1.1768 -7.8337 -3.4798 24 6 2.6328 -9.6945 -3.0652 25 6 2.2691 -6.1198 0.3529 26 1 -0.3634 -0.1133 1.0214 27 1 -0.3633 0.9412 -0.4126 28 1 -0.3633 -0.8279 -0.6089 29 1 1.6583 2.1290 0.0004 30 1 4.5111 2.8143 -1.0402 31 1 3.7386 3.2628 0.4995 32 1 5.2835 2.3787 0.5032 33 1 6.1459 0.7394 -0.7313 34 1 5.9819 -0.2329 1.9995 35 1 7.9070 -1.6824 -0.4533 36 1 5.9154 -2.6849 0.5207 37 1 4.1491 -2.1304 0.0085 38 1 3.1101 -3.6471 -0.2025 39 1 0.3704 -5.5272 -1.9591 40 1 2.1657 -5.3221 -2.1486 41 1 3.2677 -7.3068 -2.0363 42 1 3.0179 -8.5374 -0.7748 43 1 1.9806 -7.3229 -4.0101 44 1 0.6039 -8.4383 -4.1829 45 1 0.5210 -7.0962 -3.0168 46 1 3.0574 -10.3379 -2.2946 47 1 2.0603 -10.2989 -3.7689 48 1 3.4365 -9.1837 -3.5955 49 1 3.3380 -5.9816 0.1902 50 1 2.0352 -6.4623 1.3608 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608394_9599494.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:51 Heat of formation + Delta-G solvation = 88.159807 kcal Electronic energy + Delta-G solvation = -27754.233267 eV Core-core repulsion = 24060.169226 eV Total energy + Delta-G solvation = -3694.064042 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.201 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.24835 -41.63015 -40.28776 -39.02433 -37.74695 -35.10042 -34.44446 -33.18340 -30.27623 -29.48173 -29.24773 -28.53384 -26.67306 -25.92519 -25.52352 -24.10667 -23.57888 -22.12155 -21.42725 -20.66808 -19.12503 -19.00913 -18.06050 -17.61620 -17.51435 -17.14688 -16.54710 -16.35081 -16.34176 -16.12577 -16.00066 -15.58777 -15.02858 -14.77878 -14.66095 -14.41601 -14.05789 -13.97073 -13.89438 -13.56875 -13.52898 -13.43010 -13.37505 -13.24105 -13.12642 -13.04262 -12.88828 -12.81302 -12.74989 -12.57833 -12.21001 -11.99536 -11.80289 -11.74183 -11.45820 -10.72610 -10.58879 -10.15051 -9.94323 -9.63547 -4.98181 -0.29140 0.12760 1.06894 1.26273 1.50291 1.68947 1.99447 2.08563 2.59727 2.92979 3.00032 3.24373 3.37418 3.38053 3.46876 3.49735 3.57836 3.66037 3.76606 3.76860 3.82470 4.00678 4.12949 4.18670 4.19887 4.25081 4.37544 4.43086 4.45822 4.50448 4.51292 4.51661 4.63751 4.69611 4.71481 4.73711 4.74742 4.79133 4.80729 4.86721 4.88553 4.91267 4.97172 5.00232 5.09186 5.11386 5.17293 5.25488 5.43711 5.47116 5.56667 5.75688 6.42525 6.47026 7.13576 Molecular weight = 320.20amu Principal moments of inertia in cm(-1) A = 0.014284 B = 0.003547 C = 0.003027 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1959.722930 B = 7892.614911 C = 9248.742461 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.027 4.027 3 C -0.142 4.142 4 C -0.033 4.033 5 C -0.129 4.129 6 C -0.134 4.134 7 C -0.099 4.099 8 O -0.547 6.547 9 Si 0.781 3.219 10 C -0.067 4.067 11 C -0.160 4.160 12 C 0.560 3.440 13 O -0.563 6.563 14 N -0.706 5.706 15 C 0.095 3.905 16 H 0.088 0.912 17 C -0.151 4.151 18 C -0.116 4.116 19 H 0.126 0.874 20 C 0.011 3.989 21 N -0.370 5.370 22 H 0.438 0.562 23 C -0.058 4.058 24 C -0.046 4.046 25 C -0.132 4.132 26 H 0.065 0.935 27 H 0.066 0.934 28 H 0.085 0.915 29 H 0.136 0.864 30 H 0.086 0.914 31 H 0.069 0.931 32 H 0.075 0.925 33 H 0.117 0.883 34 H 0.385 0.615 35 H -0.311 1.311 36 H -0.249 1.249 37 H 0.157 0.843 38 H 0.412 0.588 39 H 0.079 0.921 40 H 0.115 0.885 41 H 0.142 0.858 42 H 0.148 0.852 43 H 0.124 0.876 44 H 0.125 0.875 45 H 0.115 0.885 46 H 0.126 0.874 47 H 0.123 0.877 48 H 0.121 0.879 49 H 0.113 0.887 50 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.504 -30.026 -12.207 32.448 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.028 4.028 3 C -0.160 4.160 4 C -0.033 4.033 5 C -0.186 4.186 6 C -0.135 4.135 7 C -0.206 4.206 8 O -0.356 6.356 9 Si 0.685 3.315 10 C -0.085 4.085 11 C -0.163 4.163 12 C 0.348 3.652 13 O -0.444 6.444 14 N -0.358 5.358 15 C -0.010 4.010 16 H 0.106 0.894 17 C -0.189 4.189 18 C -0.135 4.135 19 H 0.144 0.856 20 C -0.111 4.111 21 N 0.054 4.946 22 H 0.275 0.725 23 C -0.200 4.200 24 C -0.188 4.188 25 C -0.170 4.170 26 H 0.084 0.916 27 H 0.085 0.915 28 H 0.104 0.896 29 H 0.153 0.847 30 H 0.105 0.895 31 H 0.088 0.912 32 H 0.094 0.906 33 H 0.135 0.865 34 H 0.235 0.765 35 H -0.239 1.239 36 H -0.175 1.175 37 H 0.174 0.826 38 H 0.250 0.750 39 H 0.098 0.902 40 H 0.133 0.867 41 H 0.160 0.840 42 H 0.166 0.834 43 H 0.142 0.858 44 H 0.143 0.857 45 H 0.134 0.866 46 H 0.144 0.856 47 H 0.141 0.859 48 H 0.139 0.861 49 H 0.131 0.869 50 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges -1.436 -30.123 -12.338 32.584 hybrid contribution -0.183 1.098 1.702 2.034 sum -1.620 -29.025 -10.636 30.955 Atomic orbital electron populations 1.21018 0.90277 1.03253 1.02868 1.20213 0.96845 0.92193 0.93531 1.21186 0.93813 0.98187 1.02850 1.20214 0.93401 0.96029 0.93653 1.21009 1.00709 0.93385 1.03479 1.20123 0.96391 0.92772 1.04172 1.25488 0.91361 1.15804 0.87981 1.86614 1.76396 1.55324 1.17237 0.94382 0.77080 0.72659 0.87426 1.21311 0.92440 0.98260 0.96538 1.19731 0.93776 0.93110 1.09658 1.18314 0.86661 0.84591 0.75597 1.90754 1.15267 1.87556 1.50782 1.45812 1.11261 1.04960 1.73756 1.22755 0.97142 0.81315 0.99742 0.89401 1.23874 1.04476 0.94363 0.96229 1.22687 1.00302 0.94025 0.96527 0.85648 1.23907 0.95748 0.96868 0.94553 1.44833 1.17857 1.15951 1.15980 0.72545 1.24287 1.04439 0.98346 0.92947 1.24125 0.97626 0.93463 1.03597 1.23364 1.00980 0.93024 0.99653 0.91648 0.91470 0.89606 0.84663 0.89532 0.91161 0.90575 0.86545 0.76533 1.23949 1.17472 0.82586 0.74956 0.90208 0.86699 0.83969 0.83421 0.85763 0.85679 0.86630 0.85575 0.85886 0.86082 0.86856 0.90501 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 1.39 8.73 71.23 0.62 2.01 16 2 C -0.03 0.35 5.91 -19.61 -0.12 0.23 16 3 C -0.14 1.90 9.31 22.23 0.21 2.11 16 4 C -0.03 0.47 5.89 -19.81 -0.12 0.36 16 5 C -0.13 1.92 9.32 71.24 0.66 2.59 16 6 C -0.13 2.44 5.25 -19.90 -0.10 2.33 16 7 C -0.10 1.90 1.88 71.24 0.13 2.03 16 8 O -0.55 8.06 11.92 -148.98 -1.78 6.28 16 9 Si 0.78 -19.28 30.24 68.60 2.07 -17.20 16 10 C -0.07 1.46 8.13 22.53 0.18 1.64 16 11 C -0.16 2.72 5.87 -20.09 -0.12 2.61 16 12 C 0.56 -10.43 7.70 86.79 0.67 -9.76 16 13 O -0.56 6.20 12.95 -3.87 -0.05 6.15 16 14 N -0.71 20.95 5.30 -442.91 -2.35 18.60 16 15 C 0.09 -3.36 4.24 45.52 0.19 -3.16 16 16 H 0.09 -2.45 7.46 -2.39 -0.02 -2.46 16 17 C -0.15 6.96 5.69 31.12 0.18 7.14 16 18 C -0.12 6.24 3.31 -10.27 -0.03 6.21 16 19 H 0.13 -6.89 8.09 -2.39 -0.02 -6.91 16 20 C 0.01 -0.70 4.57 86.30 0.39 -0.31 16 21 N -0.37 24.69 0.66 -948.84 -0.62 24.06 16 22 H 0.44 -30.60 8.40 -89.69 -0.75 -31.35 16 23 C -0.06 3.62 8.57 127.69 1.09 4.72 16 24 C -0.05 3.00 9.19 127.69 1.17 4.18 16 25 C -0.13 5.84 7.39 31.12 0.23 6.07 16 26 H 0.06 -0.63 8.14 -2.39 -0.02 -0.65 16 27 H 0.07 -0.90 8.04 -2.38 -0.02 -0.92 16 28 H 0.09 -0.85 5.86 -2.39 -0.01 -0.87 16 29 H 0.14 -1.99 8.06 -2.91 -0.02 -2.01 16 30 H 0.09 -1.45 8.14 -2.38 -0.02 -1.47 16 31 H 0.07 -1.02 8.08 -2.39 -0.02 -1.04 16 32 H 0.08 -0.97 6.18 -2.38 -0.01 -0.99 16 33 H 0.12 -2.20 7.38 -2.39 -0.02 -2.22 16 34 H 0.39 -7.95 8.70 -74.06 -0.64 -8.60 16 35 H -0.31 4.48 7.11 99.48 0.71 5.19 16 36 H -0.25 6.61 6.68 99.48 0.66 7.28 16 37 H 0.16 -4.57 3.25 -2.91 -0.01 -4.58 16 38 H 0.41 -14.53 6.80 -92.70 -0.63 -15.16 16 39 H 0.08 -3.49 7.18 -2.39 -0.02 -3.51 16 40 H 0.11 -5.65 7.90 -2.39 -0.02 -5.67 16 41 H 0.14 -9.12 7.79 -2.39 -0.02 -9.14 16 42 H 0.15 -9.53 8.09 -2.39 -0.02 -9.55 16 43 H 0.12 -7.75 8.11 -2.39 -0.02 -7.77 16 44 H 0.12 -7.78 8.14 -2.39 -0.02 -7.80 16 45 H 0.12 -6.89 5.13 -2.38 -0.01 -6.90 16 46 H 0.13 -8.16 8.11 -2.39 -0.02 -8.18 16 47 H 0.12 -7.84 8.14 -2.38 -0.02 -7.86 16 48 H 0.12 -7.74 8.14 -2.39 -0.02 -7.76 16 49 H 0.11 -5.35 8.08 -2.39 -0.02 -5.37 16 50 H 0.08 -3.10 8.14 -2.39 -0.02 -3.12 16 Total: 1.00 -81.99 381.36 1.46 -80.54 By element: Atomic # 1 Polarization: -148.34 SS G_CDS: -1.07 Total: -149.41 kcal Atomic # 6 Polarization: 25.73 SS G_CDS: 5.25 Total: 30.98 kcal Atomic # 7 Polarization: 45.63 SS G_CDS: -2.97 Total: 42.66 kcal Atomic # 8 Polarization: 14.25 SS G_CDS: -1.83 Total: 12.43 kcal Atomic # 14 Polarization: -19.28 SS G_CDS: 2.07 Total: -17.20 kcal Total: -81.99 1.46 -80.54 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_9599494.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 168.700 kcal (2) G-P(sol) polarization free energy of solvation -81.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.705 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.455 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -80.540 kcal (6) G-S(sol) free energy of system = (1) + (5) 88.160 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds