Wall clock time and date at job start Sun Mar 7 2021 06:28:57 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00901 * 109.47061 * 2 1 4 4 C 1.46900 * 109.46974 * 119.99788 * 2 1 3 5 5 C 1.46898 * 109.47234 * 239.99443 * 2 1 3 6 6 C 1.53000 * 109.47142 * 175.00044 * 5 2 1 7 7 H 1.09002 * 112.84949 * 45.33738 * 6 5 2 8 8 C 1.53781 * 113.61707 * 176.53297 * 6 5 2 9 9 C 1.53777 * 87.08336 * 140.06298 * 8 6 5 10 10 H 1.09003 * 113.60961 * 89.20081 * 9 8 6 11 11 N 1.46500 * 113.61534 * 220.01705 * 9 8 6 12 12 C 1.34779 * 119.99895 * 204.99945 * 11 9 8 13 13 O 1.21276 * 120.00229 * 0.02562 * 12 11 9 14 14 C 1.50701 * 119.99810 * 180.02562 * 12 11 9 15 15 N 1.46495 * 109.46917 * 180.02562 * 14 12 11 16 16 C 1.36829 * 125.06853 * 265.02542 * 15 14 12 17 17 C 1.34229 * 109.94429 * 179.97438 * 16 15 14 18 18 C 1.50699 * 126.50461 * 180.02562 * 17 16 15 19 19 O 1.42898 * 109.47523 * 254.97819 * 18 17 16 20 20 Si 1.86302 * 109.46920 * 14.97860 * 18 17 16 21 21 C 1.46493 * 106.99869 * 0.02562 * 17 16 15 22 22 C 1.39590 * 134.03816 * 180.02562 * 21 17 16 23 23 C 1.36661 * 119.76079 * 179.97438 * 22 21 17 24 24 C 1.38795 * 120.53275 * 359.97438 * 23 22 21 25 25 C 1.37789 * 120.66136 * 359.97438 * 24 23 22 26 26 C 1.37702 * 125.05960 * 84.72410 * 15 14 12 27 27 C 1.53775 * 87.07992 * 334.56762 * 9 8 6 28 28 H 1.08999 * 109.47308 * 180.02562 * 1 2 3 29 29 H 1.08997 * 109.47230 * 300.00099 * 1 2 3 30 30 H 1.09003 * 109.47348 * 60.00488 * 1 2 3 31 31 H 1.08997 * 109.47234 * 300.00110 * 4 2 1 32 32 H 1.08999 * 109.47119 * 59.99865 * 4 2 1 33 33 H 1.09003 * 109.47359 * 180.02562 * 4 2 1 34 34 H 1.09001 * 109.46658 * 55.00413 * 5 2 1 35 35 H 1.08992 * 109.47389 * 295.00410 * 5 2 1 36 36 H 1.08997 * 113.61673 * 254.61847 * 8 6 5 37 37 H 1.09005 * 113.61396 * 25.51675 * 8 6 5 38 38 H 0.97002 * 120.00084 * 25.00713 * 11 9 8 39 39 H 1.08995 * 109.47452 * 300.00609 * 14 12 11 40 40 H 1.09002 * 109.47008 * 59.99988 * 14 12 11 41 41 H 1.08005 * 125.02533 * 359.96286 * 16 15 14 42 42 H 1.09006 * 109.47174 * 134.97243 * 18 17 16 43 43 H 0.96695 * 113.99832 * 60.00152 * 19 18 17 44 44 H 1.48498 * 109.99932 * 179.97438 * 20 18 17 45 45 H 1.48497 * 110.00143 * 301.31832 * 20 18 17 46 46 H 1.07992 * 120.12306 * 359.97438 * 22 21 17 47 47 H 1.08001 * 119.73591 * 179.97438 * 23 22 21 48 48 H 1.07996 * 119.66586 * 179.97438 * 24 23 22 49 49 H 1.08002 * 120.10633 * 179.97438 * 25 24 23 50 50 H 1.08993 * 113.61636 * 270.87622 * 27 9 8 51 51 H 1.09008 * 113.61006 * 139.97865 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6925 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 3.4835 -0.5846 -1.2638 7 1 3.9632 -0.7900 -0.3068 8 6 4.1062 -1.3518 -2.4421 9 6 5.0661 -0.1619 -2.6075 10 1 5.9791 -0.2524 -2.0189 11 7 5.3231 0.1949 -4.0049 12 6 6.4642 0.8295 -4.3395 13 8 7.2784 1.1046 -3.4838 14 6 6.7283 1.1970 -5.7769 15 7 8.0246 1.8719 -5.8780 16 6 8.2079 3.2278 -5.8683 17 6 9.5148 3.5140 -5.9772 18 6 10.1324 4.8883 -6.0046 19 8 10.5311 5.2049 -7.3398 20 14 8.8857 6.1411 -5.4153 21 6 10.2270 2.2368 -6.0644 22 6 11.5714 1.8820 -6.1886 23 6 11.9223 0.5624 -6.2447 24 6 10.9527 -0.4285 -6.1785 25 6 9.6201 -0.1005 -6.0548 26 6 9.2407 1.2360 -5.9912 27 6 3.9838 0.7027 -1.9399 28 1 -0.3634 -1.0276 0.0005 29 1 -0.3633 0.5138 0.8899 30 1 -0.3634 0.5138 -0.8900 31 1 1.5953 -0.1786 2.0894 32 1 1.5952 -1.7201 1.1995 33 1 3.0486 -0.6921 1.1998 34 1 1.5241 -0.2331 -2.0871 35 1 1.6703 -1.7428 -1.1557 36 1 4.6031 -2.2761 -2.1476 37 1 3.4269 -1.4851 -3.2841 38 1 4.6720 -0.0253 -4.6894 39 1 6.7408 0.2937 -6.3866 40 1 5.9424 1.8639 -6.1317 41 1 7.4178 3.9596 -5.7855 42 1 11.0042 4.9080 -5.3506 43 1 9.8043 5.2060 -7.9775 44 1 9.4827 7.5006 -5.4370 45 1 7.6788 6.1020 -6.2795 46 1 12.3314 2.6474 -6.2403 47 1 12.9625 0.2883 -6.3412 48 1 11.2456 -1.4670 -6.2245 49 1 8.8730 -0.8789 -6.0045 50 1 3.2711 1.1312 -2.6446 51 1 4.3820 1.4372 -1.2398 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608394_9818708.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:28:57 Heat of formation + Delta-G solvation = 163.769253 kcal Electronic energy + Delta-G solvation = -30151.749645 eV Core-core repulsion = 26139.086083 eV Total energy + Delta-G solvation = -4012.663562 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.197 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -44.57063 -43.23508 -42.22276 -40.63328 -38.67627 -38.24321 -36.09934 -34.77257 -32.58442 -32.00070 -31.87845 -30.78859 -29.75932 -28.79639 -28.11547 -26.66054 -25.54927 -24.28661 -23.38725 -22.93733 -22.53221 -21.77610 -21.27591 -20.31109 -19.76537 -19.59167 -19.25817 -18.57924 -18.23197 -18.13513 -17.74605 -17.37468 -16.96175 -16.81164 -16.69330 -16.40941 -16.26847 -16.13930 -16.04100 -15.89838 -15.76735 -15.47038 -15.38721 -15.33942 -15.26902 -15.09023 -14.93809 -14.64039 -14.36374 -14.14493 -13.99875 -13.63543 -13.36382 -13.22668 -13.14856 -12.91198 -12.52746 -12.26144 -12.09243 -11.48074 -11.11288 -10.97155 -9.70174 -9.22015 -5.51897 -1.54635 -0.39739 0.10266 0.32400 0.37625 0.45613 0.57014 0.65434 0.76111 0.97998 0.98901 1.11994 1.21746 1.31755 1.44339 1.53715 1.61383 1.64888 1.72388 1.81983 1.99944 2.03250 2.09489 2.15627 2.23425 2.29869 2.39727 2.52156 2.64840 2.80545 2.84082 2.93329 2.94070 2.98387 3.03922 3.09652 3.17708 3.22732 3.38874 3.50388 3.66743 3.70547 3.94661 4.04423 4.08224 4.15401 4.24397 4.35301 4.60450 4.99233 5.05767 5.12607 5.19714 5.25486 5.54686 5.68121 5.93287 6.00458 Molecular weight = 345.20amu Principal moments of inertia in cm(-1) A = 0.013845 B = 0.002462 C = 0.002188 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2021.858776 B =11367.844582 C =12794.859205 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.428 0.572 4 C -0.053 4.053 5 C 0.003 3.997 6 C -0.147 4.147 7 H 0.119 0.881 8 C -0.132 4.132 9 C 0.131 3.869 10 H 0.123 0.877 11 N -0.725 5.725 12 C 0.494 3.506 13 O -0.504 6.504 14 C 0.093 3.907 15 N -0.469 5.469 16 C 0.060 3.940 17 C -0.185 4.185 18 C -0.040 4.040 19 O -0.528 6.528 20 Si 0.682 3.318 21 C -0.087 4.087 22 C -0.062 4.062 23 C -0.144 4.144 24 C -0.093 4.093 25 C -0.131 4.131 26 C 0.108 3.892 27 C -0.160 4.160 28 H 0.122 0.878 29 H 0.125 0.875 30 H 0.123 0.877 31 H 0.125 0.875 32 H 0.123 0.877 33 H 0.124 0.876 34 H 0.131 0.869 35 H 0.132 0.868 36 H 0.092 0.908 37 H 0.099 0.901 38 H 0.404 0.596 39 H 0.119 0.881 40 H 0.122 0.878 41 H 0.168 0.832 42 H 0.115 0.885 43 H 0.373 0.627 44 H -0.254 1.254 45 H -0.261 1.261 46 H 0.125 0.875 47 H 0.125 0.875 48 H 0.126 0.874 49 H 0.113 0.887 50 H 0.096 0.904 51 H 0.086 0.914 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -31.765 -10.714 19.010 38.538 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.195 4.195 5 C -0.119 4.119 6 C -0.166 4.166 7 H 0.136 0.864 8 C -0.171 4.171 9 C 0.025 3.975 10 H 0.141 0.859 11 N -0.378 5.378 12 C 0.278 3.722 13 O -0.376 6.376 14 C -0.034 4.034 15 N -0.153 5.153 16 C -0.064 4.064 17 C -0.193 4.193 18 C -0.150 4.150 19 O -0.334 6.334 20 Si 0.583 3.417 21 C -0.091 4.091 22 C -0.081 4.081 23 C -0.163 4.163 24 C -0.112 4.112 25 C -0.152 4.152 26 C 0.004 3.996 27 C -0.199 4.199 28 H 0.141 0.859 29 H 0.144 0.856 30 H 0.141 0.859 31 H 0.144 0.856 32 H 0.142 0.858 33 H 0.143 0.857 34 H 0.149 0.851 35 H 0.150 0.850 36 H 0.111 0.889 37 H 0.117 0.883 38 H 0.239 0.761 39 H 0.137 0.863 40 H 0.140 0.860 41 H 0.185 0.815 42 H 0.133 0.867 43 H 0.220 0.780 44 H -0.179 1.179 45 H -0.186 1.186 46 H 0.143 0.857 47 H 0.143 0.857 48 H 0.144 0.856 49 H 0.131 0.869 50 H 0.115 0.885 51 H 0.105 0.895 Dipole moment (debyes) X Y Z Total from point charges -31.413 -10.120 19.731 38.451 hybrid contribution -0.421 -0.181 -1.466 1.536 sum -31.833 -10.301 18.265 38.120 Atomic orbital electron populations 1.24149 0.75504 1.09676 1.09635 1.45026 1.16274 1.19063 1.15883 0.73771 1.24205 1.06025 1.02494 0.86731 1.24059 0.97983 1.02519 0.87325 1.23017 0.90796 1.00847 1.01920 0.86350 1.23371 0.98209 0.98857 0.96630 1.22303 0.98094 0.93681 0.83416 0.85892 1.45885 1.21726 1.61051 1.09158 1.21220 0.81441 0.77792 0.91698 1.90839 1.44747 1.51346 1.50648 1.21538 0.86334 1.01105 0.94373 1.43143 1.03833 1.04851 1.63522 1.21539 0.97357 0.83463 1.04011 1.20645 0.92123 0.94541 1.11998 1.24331 1.07219 0.96100 0.87376 1.86635 1.37674 1.91539 1.17557 0.95327 0.77505 0.78838 0.90020 1.18955 0.92928 0.91574 1.05604 1.20366 0.93990 0.96375 0.97366 1.20731 0.99756 0.92548 1.03226 1.20868 0.91779 0.99590 0.98993 1.19907 0.96616 0.91854 1.06831 1.18155 0.84036 0.93861 1.03579 1.23799 0.99666 0.96069 1.00386 0.85911 0.85639 0.85863 0.85633 0.85834 0.85750 0.85098 0.84966 0.88899 0.88293 0.76071 0.86330 0.85999 0.81479 0.86682 0.77963 1.17862 1.18620 0.85701 0.85683 0.85599 0.86904 0.88542 0.89521 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.55 9.19 60.06 0.55 2.11 16 2 N -0.39 12.93 0.66 -251.27 -0.17 12.76 16 3 H 0.43 -14.78 8.44 -39.29 -0.33 -15.11 16 4 C -0.05 1.69 8.97 60.06 0.54 2.23 16 5 C 0.00 -0.08 4.47 -3.83 -0.02 -0.10 16 6 C -0.15 4.02 3.56 -89.81 -0.32 3.70 16 7 H 0.12 -3.30 6.13 -51.93 -0.32 -3.62 16 8 C -0.13 3.09 7.39 -25.92 -0.19 2.90 16 9 C 0.13 -2.58 4.24 -67.12 -0.28 -2.87 16 10 H 0.12 -2.03 7.46 -51.93 -0.39 -2.41 16 11 N -0.72 13.00 5.35 -53.02 -0.28 12.71 16 12 C 0.49 -6.41 7.90 -10.98 -0.09 -6.50 16 13 O -0.50 3.88 16.02 5.56 0.09 3.97 16 14 C 0.09 -1.24 6.48 -5.20 -0.03 -1.27 16 15 N -0.47 3.88 2.27 -115.71 -0.26 3.62 16 16 C 0.06 -0.48 9.89 -16.73 -0.17 -0.64 16 17 C -0.19 1.05 5.58 -102.71 -0.57 0.48 16 18 C -0.04 0.24 3.06 36.00 0.11 0.35 16 19 O -0.53 2.23 12.88 -35.23 -0.45 1.78 16 20 Si 0.68 -5.32 30.82 -169.99 -5.24 -10.56 16 21 C -0.09 0.33 6.35 -105.14 -0.67 -0.33 16 22 C -0.06 0.23 10.05 -39.65 -0.40 -0.16 16 23 C -0.14 0.67 9.97 -39.95 -0.40 0.28 16 24 C -0.09 0.52 10.01 -39.54 -0.40 0.12 16 25 C -0.13 0.79 10.00 -39.43 -0.39 0.40 16 26 C 0.11 -0.57 6.80 -83.99 -0.57 -1.14 16 27 C -0.16 3.85 7.43 -25.92 -0.19 3.65 16 28 H 0.12 -3.93 8.14 -51.93 -0.42 -4.35 16 29 H 0.13 -4.03 8.14 -51.93 -0.42 -4.46 16 30 H 0.12 -3.98 8.11 -51.93 -0.42 -4.40 16 31 H 0.13 -4.00 8.14 -51.93 -0.42 -4.42 16 32 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 33 H 0.12 -3.90 6.12 -51.93 -0.32 -4.22 16 34 H 0.13 -4.16 7.82 -51.93 -0.41 -4.56 16 35 H 0.13 -4.15 8.09 -51.93 -0.42 -4.57 16 36 H 0.09 -2.02 8.14 -51.93 -0.42 -2.45 16 37 H 0.10 -2.40 8.08 -51.93 -0.42 -2.82 16 38 H 0.40 -8.42 8.73 -40.82 -0.36 -8.78 16 39 H 0.12 -1.77 8.14 -51.93 -0.42 -2.20 16 40 H 0.12 -2.01 8.12 -51.93 -0.42 -2.44 16 41 H 0.17 -1.82 6.27 -52.48 -0.33 -2.14 16 42 H 0.12 -0.68 7.96 -51.93 -0.41 -1.09 16 43 H 0.37 -2.73 8.70 45.56 0.40 -2.34 16 44 H -0.25 1.00 7.11 56.52 0.40 1.40 16 45 H -0.26 1.86 7.00 56.52 0.40 2.25 16 46 H 0.13 -0.54 8.06 -52.49 -0.42 -0.96 16 47 H 0.13 -0.77 8.06 -52.49 -0.42 -1.20 16 48 H 0.13 -0.95 8.06 -52.49 -0.42 -1.38 16 49 H 0.11 -0.95 8.06 -52.49 -0.42 -1.37 16 50 H 0.10 -2.39 7.92 -51.93 -0.41 -2.80 16 51 H 0.09 -1.96 8.14 -51.92 -0.42 -2.38 16 LS Contribution 410.58 15.07 6.19 6.19 Total: 1.00 -41.47 410.58 -12.03 -53.50 By element: Atomic # 1 Polarization: -78.75 SS G_CDS: -8.41 Total: -87.16 kcal Atomic # 6 Polarization: 6.67 SS G_CDS: -3.49 Total: 3.19 kcal Atomic # 7 Polarization: 29.81 SS G_CDS: -0.71 Total: 29.09 kcal Atomic # 8 Polarization: 6.11 SS G_CDS: -0.36 Total: 5.75 kcal Atomic # 14 Polarization: -5.32 SS G_CDS: -5.24 Total: -10.56 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -41.47 -12.03 -53.50 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608394_9818708.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 217.268 kcal (2) G-P(sol) polarization free energy of solvation -41.472 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 175.796 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -12.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -53.499 kcal (6) G-S(sol) free energy of system = (1) + (5) 163.769 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds