Wall clock time and date at job start Sun Mar 7 2021 06:29:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46493 * 1 3 3 C 1.35536 * 125.67574 * 2 1 4 4 C 1.35454 * 108.87365 * 180.23065 * 3 2 1 5 5 C 1.50699 * 126.06977 * 179.74648 * 4 3 2 6 6 O 1.42905 * 109.47188 * 245.02732 * 5 4 3 7 7 Si 1.86299 * 109.46981 * 5.02672 * 5 4 3 8 8 C 1.39841 * 107.86175 * 359.76851 * 4 3 2 9 9 C 1.37649 * 125.68056 * 179.83205 * 2 1 3 10 10 C 1.46673 * 126.23544 * 0.02990 * 9 2 1 11 11 O 1.21700 * 119.99922 * 353.97578 * 10 9 2 12 12 N 1.34774 * 120.00184 * 174.24231 * 10 9 2 13 13 C 1.46501 * 119.99976 * 184.82011 * 12 10 9 14 14 H 1.08996 * 112.84981 * 334.66522 * 13 12 10 15 15 C 1.53774 * 113.61747 * 105.86211 * 13 12 10 16 16 C 1.54054 * 86.98812 * 89.16221 * 15 13 12 17 17 H 1.09002 * 113.68540 * 270.87982 * 16 15 13 18 18 C 1.52999 * 113.62325 * 139.98062 * 16 15 13 19 19 N 1.46895 * 109.47036 * 87.50696 * 18 16 15 20 20 H 1.00901 * 109.47233 * 304.99590 * 19 18 16 21 21 C 1.46901 * 109.47275 * 65.00413 * 19 18 16 22 22 C 1.46902 * 109.46994 * 185.00171 * 19 18 16 23 23 C 1.53786 * 87.07505 * 25.43265 * 16 15 13 24 24 H 1.09003 * 109.47328 * 274.08985 * 1 2 3 25 25 H 1.08995 * 109.47684 * 34.09265 * 1 2 3 26 26 H 1.09005 * 109.46786 * 154.09130 * 1 2 3 27 27 H 1.07997 * 125.56359 * 359.96194 * 3 2 1 28 28 H 1.08997 * 109.46958 * 125.02464 * 5 4 3 29 29 H 0.96702 * 113.99917 * 59.99768 * 6 5 4 30 30 H 1.48498 * 110.00151 * 58.68235 * 7 5 4 31 31 H 1.48498 * 109.99718 * 179.97438 * 7 5 4 32 32 H 1.08001 * 126.45648 * 179.97438 * 8 4 3 33 33 H 0.96998 * 120.00299 * 4.81380 * 12 10 9 34 34 H 1.08994 * 113.62177 * 203.66344 * 15 13 12 35 35 H 1.09000 * 113.61413 * 334.57009 * 15 13 12 36 36 H 1.09001 * 109.46835 * 207.50521 * 18 16 15 37 37 H 1.08998 * 109.46839 * 327.50508 * 18 16 15 38 38 H 1.09002 * 109.47265 * 180.02562 * 21 19 18 39 39 H 1.09001 * 109.46630 * 299.99613 * 21 19 18 40 40 H 1.08993 * 109.47543 * 59.99655 * 21 19 18 41 41 H 1.08997 * 109.47427 * 59.99319 * 22 19 18 42 42 H 1.08994 * 109.47227 * 180.02562 * 22 19 18 43 43 H 1.09005 * 109.47012 * 300.00139 * 22 19 18 44 44 H 1.08999 * 113.61054 * 220.02748 * 23 16 15 45 45 H 1.08989 * 113.68888 * 89.13272 * 23 16 15 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4649 0.0000 0.0000 3 6 2.2554 1.1010 0.0000 4 6 3.5521 0.7095 -0.0052 5 6 4.7536 1.6191 -0.0123 6 8 5.4711 1.4508 -1.2367 7 14 4.1932 3.3892 0.1408 8 6 3.5780 -0.6887 -0.0031 9 6 2.2678 -1.1181 0.0033 10 6 1.8125 -2.5124 0.0067 11 8 0.6272 -2.7651 0.1175 12 7 2.7073 -3.5138 -0.1073 13 6 2.2457 -4.9003 -0.2102 14 1 1.2651 -5.0545 0.2401 15 6 2.3731 -5.4887 -1.6252 16 6 3.7920 -5.9348 -1.2240 17 1 4.5592 -5.1868 -1.4243 18 6 4.1673 -7.3245 -1.7423 19 7 4.7387 -7.2064 -3.0904 20 1 4.0911 -6.7154 -3.6884 21 6 6.0035 -6.4623 -3.0227 22 6 4.9882 -8.5474 -3.6357 23 6 3.2956 -5.9335 0.2316 24 1 -0.3634 0.0733 1.0251 25 1 -0.3634 0.8510 -0.5760 26 1 -0.3633 -0.9244 -0.4491 27 1 1.9080 2.1236 -0.0006 28 1 5.4030 1.3697 0.8267 29 1 4.9534 1.6556 -2.0273 30 1 3.4184 3.5700 1.3946 31 1 5.3689 4.2963 0.1355 32 1 4.4583 -1.3143 -0.0065 33 1 3.6569 -3.3165 -0.1214 34 1 1.6924 -6.3182 -1.8162 35 1 2.3570 -4.7365 -2.4139 36 1 4.9016 -7.7752 -1.0746 37 1 3.2764 -7.9514 -1.7789 38 1 6.4273 -6.3743 -4.0231 39 1 5.8184 -5.4672 -2.6181 40 1 6.7031 -6.9927 -2.3768 41 1 4.0498 -9.0997 -3.6859 42 1 5.4126 -8.4598 -4.6358 43 1 5.6878 -9.0780 -2.9897 44 1 4.0238 -5.5401 0.9408 45 1 2.8665 -6.8839 0.5487 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_10803934.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:13 Heat of formation + Delta-G solvation = 116.315577 kcal Electronic energy + Delta-G solvation = -24323.198814 eV Core-core repulsion = 20848.693547 eV Total energy + Delta-G solvation = -3474.505267 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.63743 -42.13411 -40.62432 -38.96204 -37.67615 -34.90659 -33.73722 -31.18365 -29.83741 -29.37083 -28.35886 -26.86869 -26.04578 -25.65197 -24.42019 -23.33717 -21.37272 -20.77797 -20.25999 -19.30492 -18.84760 -17.88450 -17.64334 -17.23437 -16.96634 -16.89809 -16.60504 -15.92522 -15.81629 -15.55848 -15.26306 -15.10875 -14.86535 -14.43225 -14.13151 -14.05271 -13.75445 -13.55369 -13.51443 -13.47441 -13.30299 -13.24069 -13.19688 -13.12065 -12.82848 -12.34278 -12.03186 -11.98254 -11.72651 -11.35473 -11.23904 -10.35230 -10.23846 -9.74777 -9.30459 -5.00461 0.34939 1.03804 1.38047 1.47726 1.53670 1.67831 2.02196 2.21742 2.24021 2.91581 2.97136 3.17224 3.39974 3.43689 3.59269 3.67006 3.76171 3.78390 3.81448 3.89573 4.00860 4.18065 4.19806 4.27712 4.30327 4.37342 4.37649 4.45297 4.51468 4.62869 4.64305 4.67557 4.70963 4.73951 4.75743 4.82062 4.84932 4.88529 4.95233 5.02244 5.13251 5.16804 5.49056 5.64058 5.87631 6.08839 6.38685 6.87465 7.07018 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.017406 B = 0.003780 C = 0.003249 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1608.245490 B = 7405.206040 C = 8615.710392 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.061 3.939 2 N -0.414 5.414 3 C 0.028 3.972 4 C -0.217 4.217 5 C -0.021 4.021 6 O -0.555 6.555 7 Si 0.759 3.241 8 C -0.105 4.105 9 C -0.080 4.080 10 C 0.589 3.411 11 O -0.584 6.584 12 N -0.688 5.688 13 C 0.093 3.907 14 H 0.071 0.929 15 C -0.149 4.149 16 C -0.121 4.121 17 H 0.129 0.871 18 C 0.009 3.991 19 N -0.372 5.372 20 H 0.436 0.564 21 C -0.055 4.055 22 C -0.047 4.047 23 C -0.126 4.126 24 H 0.075 0.925 25 H 0.110 0.890 26 H 0.090 0.910 27 H 0.192 0.808 28 H 0.106 0.894 29 H 0.394 0.606 30 H -0.293 1.293 31 H -0.309 1.309 32 H 0.168 0.832 33 H 0.417 0.583 34 H 0.113 0.887 35 H 0.076 0.924 36 H 0.143 0.857 37 H 0.142 0.858 38 H 0.126 0.874 39 H 0.121 0.879 40 H 0.123 0.877 41 H 0.124 0.876 42 H 0.124 0.876 43 H 0.120 0.880 44 H 0.083 0.917 45 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 8.019 -23.635 -13.465 28.359 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.079 4.079 2 N -0.086 5.086 3 C -0.109 4.109 4 C -0.224 4.224 5 C -0.133 4.133 6 O -0.363 6.363 7 Si 0.667 3.333 8 C -0.131 4.131 9 C -0.193 4.193 10 C 0.378 3.622 11 O -0.466 6.466 12 N -0.340 5.340 13 C -0.012 4.012 14 H 0.089 0.911 15 C -0.187 4.187 16 C -0.139 4.139 17 H 0.147 0.853 18 C -0.113 4.113 19 N 0.052 4.948 20 H 0.272 0.728 21 C -0.197 4.197 22 C -0.188 4.188 23 C -0.165 4.165 24 H 0.094 0.906 25 H 0.129 0.871 26 H 0.109 0.891 27 H 0.209 0.791 28 H 0.123 0.877 29 H 0.244 0.756 30 H -0.220 1.220 31 H -0.237 1.237 32 H 0.185 0.815 33 H 0.255 0.745 34 H 0.131 0.869 35 H 0.095 0.905 36 H 0.161 0.839 37 H 0.160 0.840 38 H 0.144 0.856 39 H 0.140 0.860 40 H 0.141 0.859 41 H 0.142 0.858 42 H 0.143 0.857 43 H 0.139 0.861 44 H 0.101 0.899 45 H 0.133 0.867 Dipole moment (debyes) X Y Z Total from point charges 7.447 -23.459 -12.381 27.551 hybrid contribution -0.018 0.342 0.636 0.722 sum 7.429 -23.117 -11.746 26.973 Atomic orbital electron populations 1.22405 0.75150 1.06047 1.04340 1.44035 1.07507 1.05113 1.51978 1.22312 0.90168 0.92484 1.05911 1.19850 0.93683 0.95292 1.13544 1.24141 0.92660 1.06821 0.89699 1.86438 1.42112 1.91948 1.15776 0.94226 0.80185 0.73857 0.84991 1.21397 0.94289 0.94643 1.02818 1.20182 0.90866 0.87704 1.20537 1.17141 0.85365 0.84283 0.75369 1.90819 1.18319 1.85265 1.52186 1.45128 1.09807 1.05083 1.73946 1.22043 0.99542 0.80070 0.99592 0.91081 1.23715 0.97095 1.01883 0.96022 1.23120 0.97594 0.96696 0.96524 0.85287 1.23915 1.05242 0.99641 0.82514 1.44802 1.17134 1.16785 1.16056 0.72778 1.24210 0.84883 1.00898 1.09734 1.24130 1.08686 0.81408 1.04623 1.23281 0.97372 0.99404 0.96446 0.90647 0.87142 0.89130 0.79125 0.87674 0.75638 1.22005 1.23713 0.81479 0.74500 0.86910 0.90513 0.83866 0.83974 0.85589 0.86034 0.85860 0.85753 0.85723 0.86096 0.89863 0.86745 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.06 -1.09 10.63 127.77 1.36 0.27 16 2 N -0.41 6.78 3.16 -534.33 -1.69 5.09 16 3 C 0.03 -0.52 9.94 83.48 0.83 0.31 16 4 C -0.22 4.06 5.43 -20.12 -0.11 3.95 16 5 C -0.02 0.38 3.02 71.24 0.22 0.60 16 6 O -0.56 10.37 12.88 -148.98 -1.92 8.45 16 7 Si 0.76 -12.81 30.60 68.60 2.10 -10.71 16 8 C -0.11 2.18 10.29 22.57 0.23 2.42 16 9 C -0.08 1.41 6.88 40.35 0.28 1.69 16 10 C 0.59 -10.71 7.77 86.45 0.67 -10.04 16 11 O -0.58 5.71 14.26 -4.35 -0.06 5.65 16 12 N -0.69 20.25 5.25 -444.00 -2.33 17.92 16 13 C 0.09 -3.13 4.33 45.52 0.20 -2.93 16 14 H 0.07 -1.76 7.45 -2.39 -0.02 -1.78 16 15 C -0.15 6.56 7.45 31.21 0.23 6.79 16 16 C -0.12 6.41 3.47 -10.17 -0.04 6.38 16 17 H 0.13 -7.21 6.10 -2.39 -0.01 -7.23 16 18 C 0.01 -0.54 4.48 86.30 0.39 -0.15 16 19 N -0.37 24.49 0.66 -948.86 -0.62 23.86 16 20 H 0.44 -29.75 8.44 -89.69 -0.76 -30.50 16 21 C -0.06 3.49 8.98 127.69 1.15 4.64 16 22 C -0.05 2.97 9.19 127.69 1.17 4.15 16 23 C -0.13 5.46 7.38 31.12 0.23 5.69 16 24 H 0.07 -1.28 8.14 -2.39 -0.02 -1.30 16 25 H 0.11 -2.52 8.14 -2.39 -0.02 -2.54 16 26 H 0.09 -1.32 6.24 -2.38 -0.01 -1.34 16 27 H 0.19 -4.42 6.21 -2.91 -0.02 -4.43 16 28 H 0.11 -1.79 7.96 -2.39 -0.02 -1.81 16 29 H 0.39 -10.34 8.70 -74.06 -0.64 -10.99 16 30 H -0.29 3.16 7.11 99.48 0.71 3.87 16 31 H -0.31 2.32 7.11 99.48 0.71 3.03 16 32 H 0.17 -4.54 7.45 -2.91 -0.02 -4.57 16 33 H 0.42 -14.81 7.61 -92.71 -0.71 -15.52 16 34 H 0.11 -5.17 7.90 -2.39 -0.02 -5.19 16 35 H 0.08 -3.19 8.14 -2.39 -0.02 -3.21 16 36 H 0.14 -8.95 8.09 -2.39 -0.02 -8.97 16 37 H 0.14 -8.86 7.79 -2.39 -0.02 -8.88 16 38 H 0.13 -7.91 8.14 -2.39 -0.02 -7.93 16 39 H 0.12 -7.60 6.10 -2.39 -0.01 -7.62 16 40 H 0.12 -7.72 8.11 -2.39 -0.02 -7.74 16 41 H 0.12 -7.87 8.11 -2.39 -0.02 -7.89 16 42 H 0.12 -7.85 8.14 -2.39 -0.02 -7.87 16 43 H 0.12 -7.59 8.14 -2.38 -0.02 -7.61 16 44 H 0.08 -3.41 8.14 -2.39 -0.02 -3.43 16 45 H 0.11 -5.04 8.10 -2.39 -0.02 -5.06 16 Total: 1.00 -83.68 357.61 1.22 -82.46 By element: Atomic # 1 Polarization: -155.41 SS G_CDS: -1.06 Total: -156.48 kcal Atomic # 6 Polarization: 16.94 SS G_CDS: 6.81 Total: 23.75 kcal Atomic # 7 Polarization: 51.52 SS G_CDS: -4.64 Total: 46.87 kcal Atomic # 8 Polarization: 16.09 SS G_CDS: -1.98 Total: 14.10 kcal Atomic # 14 Polarization: -12.81 SS G_CDS: 2.10 Total: -10.71 kcal Total: -83.68 1.22 -82.46 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_10803934.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 198.778 kcal (2) G-P(sol) polarization free energy of solvation -83.679 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.099 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.217 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -82.463 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.316 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds