Wall clock time and date at job start Sun Mar 7 2021 06:29:17 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46503 * 1 3 3 C 1.37648 * 125.67933 * 2 1 4 4 C 1.46676 * 126.23423 * 0.05316 * 3 2 1 5 5 O 1.21692 * 119.99899 * 5.49007 * 4 3 2 6 6 N 1.34775 * 120.00210 * 185.48461 * 4 3 2 7 7 C 1.46494 * 120.00092 * 185.08477 * 6 4 3 8 8 H 1.08997 * 112.85216 * 334.67091 * 7 6 4 9 9 C 1.53775 * 113.61383 * 105.86942 * 7 6 4 10 10 C 1.54048 * 86.99012 * 89.16280 * 9 7 6 11 11 H 1.09008 * 113.68777 * 270.87765 * 10 9 7 12 12 C 1.52995 * 113.62373 * 139.98249 * 10 9 7 13 13 N 1.46899 * 109.47400 * 87.50517 * 12 10 9 14 14 H 1.00899 * 109.47112 * 54.99887 * 13 12 10 15 15 C 1.46905 * 109.46929 * 175.00127 * 13 12 10 16 16 C 1.46901 * 109.47062 * 294.99586 * 13 12 10 17 17 C 1.53779 * 87.07781 * 25.42951 * 10 9 7 18 18 C 1.37875 * 107.53326 * 180.02562 * 3 2 1 19 19 C 1.39836 * 107.08268 * 0.02562 * 18 3 2 20 20 C 1.35447 * 107.86976 * 0.02562 * 19 18 3 21 21 C 1.50696 * 125.56683 * 180.26632 * 20 19 18 22 22 O 1.42904 * 109.47108 * 149.69162 * 21 20 19 23 23 Si 1.86292 * 109.47226 * 29.69013 * 21 20 19 24 24 H 1.09001 * 109.47536 * 265.38142 * 1 2 3 25 25 H 1.09001 * 109.46604 * 25.38181 * 1 2 3 26 26 H 1.09000 * 109.47483 * 145.37748 * 1 2 3 27 27 H 0.97006 * 119.99617 * 5.09287 * 6 4 3 28 28 H 1.09008 * 113.61481 * 203.66356 * 9 7 6 29 29 H 1.08995 * 113.61618 * 334.56370 * 9 7 6 30 30 H 1.09000 * 109.47273 * 207.50745 * 12 10 9 31 31 H 1.09005 * 109.47203 * 327.50139 * 12 10 9 32 32 H 1.09004 * 109.47204 * 59.99887 * 15 13 12 33 33 H 1.08996 * 109.46420 * 179.97438 * 15 13 12 34 34 H 1.08997 * 109.46808 * 299.99741 * 15 13 12 35 35 H 1.08996 * 109.47316 * 300.00960 * 16 13 12 36 36 H 1.09011 * 109.46365 * 60.00128 * 16 13 12 37 37 H 1.08996 * 109.47644 * 179.97438 * 16 13 12 38 38 H 1.08996 * 113.61784 * 220.02569 * 17 10 9 39 39 H 1.08999 * 113.68888 * 89.13228 * 17 10 9 40 40 H 1.07997 * 126.45630 * 179.97438 * 18 3 2 41 41 H 1.07999 * 126.06472 * 179.97438 * 19 18 3 42 42 H 1.09005 * 109.47140 * 269.68825 * 21 20 19 43 43 H 0.96708 * 113.99813 * 179.97438 * 22 21 20 44 44 H 1.48506 * 110.00215 * 298.68191 * 23 21 20 45 45 H 1.48496 * 110.00143 * 60.00421 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4650 0.0000 0.0000 3 6 2.2679 1.1181 0.0000 4 6 1.8125 2.5124 0.0011 5 8 0.6265 2.7650 0.1030 6 7 2.7076 3.5138 -0.1106 7 6 2.2668 4.9062 0.0022 8 1 1.2180 5.0410 -0.2622 9 6 2.6566 5.5699 1.3335 10 6 3.9717 5.9860 0.6475 11 1 4.7668 5.2459 0.7394 12 6 4.4313 7.3997 1.0093 13 7 5.2480 7.3519 2.2294 14 1 6.0091 6.7024 2.0995 15 6 5.7878 8.6891 2.5099 16 6 4.4167 6.9128 3.3582 17 6 3.2091 5.9083 -0.6856 18 6 3.5780 0.6887 -0.0006 19 6 3.5521 -0.7094 -0.0015 20 6 2.2555 -1.1010 -0.0021 21 6 1.7708 -2.5279 0.0025 22 8 0.5152 -2.6023 0.6808 23 14 3.0144 -3.6034 0.8785 24 1 -0.3634 -0.0827 1.0243 25 1 -0.3632 0.9285 -0.4405 26 1 -0.3634 -0.8457 -0.5839 27 1 3.6438 3.3124 -0.2658 28 1 2.0200 6.4122 1.6044 29 1 2.7938 4.8618 2.1506 30 1 5.0237 7.8097 0.1914 31 1 3.5602 8.0325 1.1797 32 1 4.9656 9.3908 2.6503 33 1 6.3934 8.6537 3.4155 34 1 6.4046 9.0149 1.6724 35 1 3.5945 7.6144 3.4985 36 1 4.0162 5.9206 3.1499 37 1 5.0228 6.8769 4.2635 38 1 3.7919 5.4732 -1.4974 39 1 2.7229 6.8424 -0.9670 40 1 4.4584 1.3143 -0.0011 41 1 4.4131 -1.3613 -0.0026 42 1 1.6503 -2.8741 -1.0241 43 1 0.1425 -3.4937 0.7217 44 1 4.3159 -3.5597 0.1646 45 1 3.1877 -3.1419 2.2792 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_10803936.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:17 Heat of formation + Delta-G solvation = 116.432557 kcal Electronic energy + Delta-G solvation = -24431.115366 eV Core-core repulsion = 20956.615171 eV Total energy + Delta-G solvation = -3474.500195 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.73 seconds Orbital eigenvalues (eV) -42.76835 -42.23056 -40.67743 -38.99033 -37.71316 -34.97014 -33.78758 -31.70863 -30.10963 -29.52292 -27.63436 -27.11797 -26.72231 -25.70705 -23.94555 -23.30320 -21.80701 -20.73633 -20.34949 -19.12269 -18.86804 -18.36979 -17.90095 -17.45461 -17.16587 -16.98279 -16.64394 -16.12373 -15.74035 -15.48932 -15.14221 -14.94858 -14.92794 -14.59278 -14.08242 -13.94380 -13.77080 -13.71156 -13.58197 -13.56334 -13.41800 -13.31378 -13.16827 -13.07982 -12.80718 -12.76921 -12.17905 -12.00801 -11.73987 -11.39687 -11.29193 -10.65259 -10.26530 -9.95832 -9.23830 -4.95136 0.21122 1.02158 1.09592 1.39582 1.61905 1.67758 2.00724 2.14477 2.19698 2.85935 2.94627 3.16167 3.18171 3.31604 3.43675 3.53369 3.65965 3.73022 3.75754 3.81483 4.00151 4.16638 4.17749 4.19122 4.23188 4.31868 4.32864 4.39406 4.40705 4.50049 4.59661 4.67681 4.69261 4.74054 4.75667 4.80643 4.81953 4.86758 4.90579 4.92592 4.99813 5.09875 5.43998 5.57067 5.84012 5.93970 6.33121 6.74369 7.00670 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.025101 B = 0.003318 C = 0.003116 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1115.235415 B = 8435.672368 C = 8984.215829 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.083 3.917 2 N -0.403 5.403 3 C -0.083 4.083 4 C 0.591 3.409 5 O -0.584 6.584 6 N -0.685 5.685 7 C 0.091 3.909 8 H 0.070 0.930 9 C -0.151 4.151 10 C -0.117 4.117 11 H 0.131 0.869 12 C 0.009 3.991 13 N -0.368 5.368 14 H 0.439 0.561 15 C -0.046 4.046 16 C -0.057 4.057 17 C -0.124 4.124 18 C -0.119 4.119 19 C -0.233 4.233 20 C 0.045 3.955 21 C -0.066 4.066 22 O -0.568 6.568 23 Si 0.810 3.190 24 H 0.071 0.929 25 H 0.084 0.916 26 H 0.096 0.904 27 H 0.419 0.581 28 H 0.112 0.888 29 H 0.077 0.923 30 H 0.151 0.849 31 H 0.136 0.864 32 H 0.117 0.883 33 H 0.124 0.876 34 H 0.128 0.872 35 H 0.120 0.880 36 H 0.114 0.886 37 H 0.126 0.874 38 H 0.085 0.915 39 H 0.115 0.885 40 H 0.187 0.813 41 H 0.152 0.848 42 H 0.098 0.902 43 H 0.409 0.591 44 H -0.277 1.277 45 H -0.307 1.307 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.712 21.874 6.061 27.049 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.076 5.076 3 C -0.197 4.197 4 C 0.380 3.620 5 O -0.465 6.465 6 N -0.337 5.337 7 C -0.014 4.014 8 H 0.088 0.912 9 C -0.190 4.190 10 C -0.136 4.136 11 H 0.149 0.851 12 C -0.113 4.113 13 N 0.056 4.944 14 H 0.276 0.724 15 C -0.188 4.188 16 C -0.200 4.200 17 C -0.163 4.163 18 C -0.145 4.145 19 C -0.256 4.256 20 C -0.074 4.074 21 C -0.174 4.174 22 O -0.379 6.379 23 Si 0.713 3.287 24 H 0.089 0.911 25 H 0.103 0.897 26 H 0.115 0.885 27 H 0.257 0.743 28 H 0.131 0.869 29 H 0.096 0.904 30 H 0.169 0.831 31 H 0.154 0.846 32 H 0.136 0.864 33 H 0.142 0.858 34 H 0.146 0.854 35 H 0.138 0.862 36 H 0.132 0.868 37 H 0.145 0.855 38 H 0.103 0.897 39 H 0.133 0.867 40 H 0.204 0.796 41 H 0.170 0.830 42 H 0.116 0.884 43 H 0.261 0.739 44 H -0.204 1.204 45 H -0.235 1.235 Dipole moment (debyes) X Y Z Total from point charges 14.113 22.898 6.645 27.706 hybrid contribution -0.133 -0.220 -0.423 0.495 sum 13.980 22.678 6.222 27.357 Atomic orbital electron populations 1.22153 0.75381 1.04457 1.03821 1.43985 1.07485 1.04648 1.51467 1.20384 0.91191 0.87759 1.20333 1.17057 0.85378 0.84053 0.75546 1.90814 1.18133 1.85197 1.52376 1.45088 1.11284 1.04575 1.72730 1.22087 0.99842 0.79707 0.99778 0.91173 1.23849 0.97428 1.01489 0.96185 1.23042 0.97527 0.96531 0.96490 0.85118 1.23922 1.00272 0.99494 0.87589 1.44815 1.17526 1.17639 1.14465 0.72387 1.24129 1.04532 0.81640 1.08518 1.24262 0.99496 1.06203 0.90009 1.23267 0.96715 0.99424 0.96888 1.21626 0.94778 0.94576 1.03521 1.20849 0.94791 0.96796 1.13211 1.20757 0.91098 0.88389 1.07144 1.24759 0.95255 0.94419 1.03007 1.86399 1.35224 1.37341 1.78899 0.94044 0.75312 0.84607 0.74750 0.91065 0.89715 0.88545 0.74311 0.86926 0.90432 0.83105 0.84576 0.86414 0.85772 0.85351 0.86157 0.86763 0.85521 0.89651 0.86690 0.79587 0.83002 0.88397 0.73854 1.20387 1.23497 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.08 -0.77 9.27 127.77 1.18 0.41 16 2 N -0.40 3.63 3.16 -519.70 -1.64 1.98 16 3 C -0.08 1.09 6.88 40.35 0.28 1.36 16 4 C 0.59 -9.01 7.77 86.45 0.67 -8.34 16 5 O -0.58 3.83 14.24 -4.32 -0.06 3.77 16 6 N -0.68 19.19 5.24 -444.02 -2.33 16.86 16 7 C 0.09 -2.98 4.33 45.52 0.20 -2.78 16 8 H 0.07 -1.65 7.45 -2.39 -0.02 -1.67 16 9 C -0.15 6.55 5.71 31.21 0.18 6.73 16 10 C -0.12 6.19 3.19 -10.18 -0.03 6.16 16 11 H 0.13 -7.33 8.10 -2.38 -0.02 -7.35 16 12 C 0.01 -0.56 4.57 86.30 0.39 -0.17 16 13 N -0.37 24.15 0.66 -948.83 -0.62 23.53 16 14 H 0.44 -30.57 8.41 -89.69 -0.75 -31.33 16 15 C -0.05 2.95 9.19 127.69 1.17 4.13 16 16 C -0.06 3.48 8.57 127.69 1.09 4.58 16 17 C -0.12 5.33 7.38 31.12 0.23 5.56 16 18 C -0.12 2.13 10.35 22.57 0.23 2.36 16 19 C -0.23 3.07 9.36 22.01 0.21 3.27 16 20 C 0.04 -0.47 6.18 41.34 0.26 -0.22 16 21 C -0.07 1.03 2.89 71.23 0.21 1.24 16 22 O -0.57 9.02 10.48 -148.98 -1.56 7.46 16 23 Si 0.81 -14.03 31.21 68.60 2.14 -11.88 16 24 H 0.07 -0.59 8.14 -2.39 -0.02 -0.60 16 25 H 0.08 -0.60 6.19 -2.39 -0.01 -0.62 16 26 H 0.10 -1.10 7.12 -2.39 -0.02 -1.12 16 27 H 0.42 -14.58 7.65 -92.70 -0.71 -15.29 16 28 H 0.11 -5.07 7.90 -2.38 -0.02 -5.09 16 29 H 0.08 -3.17 7.19 -2.39 -0.02 -3.19 16 30 H 0.15 -9.59 8.09 -2.39 -0.02 -9.61 16 31 H 0.14 -8.32 7.79 -2.38 -0.02 -8.34 16 32 H 0.12 -7.30 8.14 -2.38 -0.02 -7.32 16 33 H 0.12 -7.79 8.14 -2.39 -0.02 -7.81 16 34 H 0.13 -8.20 8.11 -2.39 -0.02 -8.22 16 35 H 0.12 -7.19 8.11 -2.39 -0.02 -7.21 16 36 H 0.11 -6.60 5.14 -2.38 -0.01 -6.61 16 37 H 0.13 -7.71 8.14 -2.39 -0.02 -7.73 16 38 H 0.08 -3.49 8.14 -2.39 -0.02 -3.51 16 39 H 0.11 -5.03 8.10 -2.39 -0.02 -5.05 16 40 H 0.19 -5.26 7.49 -2.91 -0.02 -5.28 16 41 H 0.15 -2.31 6.69 -2.91 -0.02 -2.33 16 42 H 0.10 -1.87 7.96 -2.38 -0.02 -1.89 16 43 H 0.41 -10.51 8.74 -74.05 -0.65 -11.16 16 44 H -0.28 3.75 6.87 99.48 0.68 4.43 16 45 H -0.31 2.60 7.11 99.48 0.71 3.31 16 Total: 1.00 -85.66 351.56 1.10 -84.56 By element: Atomic # 1 Polarization: -149.49 SS G_CDS: -1.09 Total: -150.59 kcal Atomic # 6 Polarization: 18.04 SS G_CDS: 6.27 Total: 24.31 kcal Atomic # 7 Polarization: 46.97 SS G_CDS: -4.59 Total: 42.38 kcal Atomic # 8 Polarization: 12.85 SS G_CDS: -1.62 Total: 11.23 kcal Atomic # 14 Polarization: -14.03 SS G_CDS: 2.14 Total: -11.88 kcal Total: -85.66 1.10 -84.56 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_10803936.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 200.989 kcal (2) G-P(sol) polarization free energy of solvation -85.661 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 115.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.104 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.557 kcal (6) G-S(sol) free energy of system = (1) + (5) 116.433 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.73 seconds