Wall clock time and date at job start Sun Mar 7 2021 06:29:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46905 * 1 3 3 H 1.00897 * 109.46950 * 2 1 4 4 C 1.46900 * 109.46822 * 119.99617 * 2 1 3 5 5 C 1.46895 * 109.47158 * 239.99994 * 2 1 3 6 6 C 1.52999 * 109.47015 * 175.00396 * 5 2 1 7 7 H 1.09001 * 112.90678 * 316.24545 * 6 5 2 8 8 C 1.53775 * 113.61843 * 87.50094 * 6 5 2 9 9 C 1.53782 * 87.08181 * 139.98174 * 8 6 5 10 10 H 1.09001 * 113.68812 * 220.00482 * 9 8 6 11 11 N 1.46504 * 113.61285 * 89.12070 * 9 8 6 12 12 C 1.34775 * 120.00370 * 107.50389 * 11 9 8 13 13 O 1.21723 * 119.99760 * 359.97438 * 12 11 9 14 14 C 1.46561 * 119.99886 * 179.97438 * 12 11 9 15 15 C 1.40860 * 126.57905 * 179.97438 * 14 12 11 16 16 C 1.40089 * 132.86280 * 0.02864 * 15 14 12 17 17 C 1.36449 * 119.25145 * 179.97438 * 16 15 14 18 18 C 1.50705 * 120.29808 * 179.97438 * 17 16 15 19 19 O 1.42899 * 109.47453 * 240.00507 * 18 17 16 20 20 Si 1.86295 * 109.47086 * 119.99714 * 18 17 16 21 21 C 1.40161 * 119.41047 * 0.02562 * 17 16 15 22 22 C 1.35189 * 120.31924 * 359.97438 * 21 17 16 23 23 N 1.36240 * 120.70203 * 359.97438 * 22 21 17 24 24 N 1.40022 * 132.00784 * 180.02562 * 23 22 21 25 25 C 1.30744 * 109.60084 * 179.97438 * 24 23 22 26 26 C 1.53778 * 113.61475 * 185.00194 * 6 5 2 27 27 H 1.08995 * 109.47030 * 179.97438 * 1 2 3 28 28 H 1.08999 * 109.47437 * 300.00371 * 1 2 3 29 29 H 1.09002 * 109.46735 * 60.00078 * 1 2 3 30 30 H 1.08997 * 109.46743 * 179.97438 * 4 2 1 31 31 H 1.08995 * 109.47576 * 300.00355 * 4 2 1 32 32 H 1.09003 * 109.47262 * 60.00471 * 4 2 1 33 33 H 1.08998 * 109.47120 * 54.99994 * 5 2 1 34 34 H 1.08997 * 109.47390 * 294.99685 * 5 2 1 35 35 H 1.09001 * 113.61637 * 25.43369 * 8 6 5 36 36 H 1.09008 * 113.61373 * 254.52784 * 8 6 5 37 37 H 0.97003 * 119.99273 * 287.49456 * 11 9 8 38 38 H 1.07996 * 120.37875 * 359.97438 * 16 15 14 39 39 H 1.09008 * 109.46762 * 0.02562 * 18 17 16 40 40 H 0.96691 * 113.99937 * 180.02562 * 19 18 17 41 41 H 1.48498 * 110.00426 * 298.68546 * 20 18 17 42 42 H 1.48499 * 109.99883 * 60.00640 * 20 18 17 43 43 H 1.08005 * 119.84064 * 179.97438 * 21 17 16 44 44 H 1.07992 * 119.64652 * 180.02562 * 22 21 17 45 45 H 1.08000 * 125.62470 * 180.02562 * 25 24 23 46 46 H 1.09001 * 113.61834 * 105.47033 * 26 6 5 47 47 H 1.09005 * 113.61733 * 334.55923 * 26 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9586 -0.6924 1.1995 5 6 1.9587 -0.6925 -1.1994 6 6 3.4835 -0.5846 -1.2637 7 1 3.8485 0.4150 -1.0276 8 6 4.2130 -1.7028 -0.5009 9 6 5.2160 -1.7358 -1.6661 10 1 5.5294 -2.7416 -1.9459 11 7 6.3432 -0.8154 -1.4964 12 6 7.5688 -1.2965 -1.2086 13 8 7.7391 -2.4958 -1.0892 14 6 8.6964 -0.3757 -1.0395 15 6 10.0274 -0.7248 -0.7385 16 6 10.6643 -1.9534 -0.5203 17 6 12.0000 -1.9718 -0.2421 18 6 12.7087 -3.2801 -0.0027 19 8 13.2750 -3.2820 1.3093 20 14 14.0631 -3.4925 -1.2641 21 6 12.7068 -0.7631 -0.1798 22 6 12.0715 0.4108 -0.3940 23 7 10.7383 0.4394 -0.6734 24 7 9.8574 1.4968 -0.9310 25 6 8.6575 1.0251 -1.1482 26 6 4.0891 -1.1737 -2.5486 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 3.0486 -0.6928 1.1993 31 1 1.5953 -0.1786 2.0894 32 1 1.5954 -1.7201 1.1995 33 1 1.5241 -0.2330 -2.0871 34 1 1.6704 -1.7427 -1.1558 35 1 3.6283 -2.6174 -0.4021 36 1 4.6501 -1.3747 0.4423 37 1 6.2073 0.1404 -1.5914 38 1 10.1044 -2.8755 -0.5716 39 1 11.9969 -4.1007 -0.0928 40 1 13.7481 -4.0953 1.5322 41 1 13.4837 -3.5241 -2.6311 42 1 15.0403 -2.3799 -1.1523 43 1 13.7642 -0.7696 0.0402 44 1 12.6268 1.3357 -0.3438 45 1 7.7808 1.6146 -1.3725 46 1 4.4261 -0.4185 -3.2587 47 1 3.4705 -1.9437 -3.0098 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_11618758.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:21 Heat of formation + Delta-G solvation = 172.353988 kcal Electronic energy + Delta-G solvation = -28330.019905 eV Core-core repulsion = 24407.840313 eV Total energy + Delta-G solvation = -3922.179592 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.176 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -43.46079 -42.24387 -40.73370 -39.35441 -38.86425 -37.32725 -34.62825 -34.25107 -32.31996 -30.80522 -29.80877 -29.48577 -27.43130 -26.67611 -25.95707 -25.13607 -24.12922 -23.55093 -23.03151 -21.48100 -20.57471 -19.38853 -19.04050 -18.47397 -18.06024 -17.84616 -17.62173 -17.35039 -17.08055 -16.92683 -16.65125 -16.00661 -15.86029 -15.63788 -15.54076 -15.06665 -14.79634 -14.62905 -14.35220 -14.05030 -13.97299 -13.73551 -13.54346 -13.52164 -13.46296 -13.28395 -13.16638 -13.04808 -12.72818 -12.64152 -12.26012 -12.10695 -12.03808 -11.77992 -11.64020 -11.33307 -11.09213 -10.90526 -10.29766 -10.12633 -8.94995 -5.06212 -0.74152 -0.28926 0.85030 0.91774 1.04956 1.17431 1.57621 1.85837 1.91464 2.10721 2.35542 2.89329 2.90487 2.97895 3.07041 3.22660 3.36024 3.37846 3.49145 3.55148 3.64084 3.74179 3.76074 3.80652 3.87239 4.04476 4.08869 4.19934 4.21502 4.22236 4.28142 4.35390 4.41852 4.43704 4.54400 4.58776 4.73354 4.74482 4.79065 4.82531 4.88147 4.89004 4.94801 4.97450 5.00093 5.06517 5.15428 5.18550 5.47663 5.58805 6.16145 6.51172 6.79940 7.22750 Molecular weight = 332.18amu Principal moments of inertia in cm(-1) A = 0.020681 B = 0.002485 C = 0.002385 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1353.560016 B =11265.180932 C =11737.083331 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.368 5.368 3 H 0.439 0.561 4 C -0.057 4.057 5 C 0.009 3.991 6 C -0.117 4.117 7 H 0.132 0.868 8 C -0.151 4.151 9 C 0.093 3.907 10 H 0.068 0.932 11 N -0.694 5.694 12 C 0.602 3.398 13 O -0.590 6.590 14 C -0.337 4.337 15 C 0.145 3.855 16 C -0.119 4.119 17 C -0.033 4.033 18 C -0.077 4.077 19 O -0.557 6.557 20 Si 0.792 3.208 21 C -0.154 4.154 22 C 0.109 3.891 23 N -0.277 5.277 24 N -0.341 5.341 25 C 0.135 3.865 26 C -0.126 4.126 27 H 0.117 0.883 28 H 0.124 0.876 29 H 0.128 0.872 30 H 0.115 0.885 31 H 0.126 0.874 32 H 0.119 0.881 33 H 0.150 0.850 34 H 0.135 0.865 35 H 0.110 0.890 36 H 0.078 0.922 37 H 0.415 0.585 38 H 0.158 0.842 39 H 0.096 0.904 40 H 0.409 0.591 41 H -0.303 1.303 42 H -0.279 1.279 43 H 0.176 0.824 44 H 0.202 0.798 45 H 0.247 0.753 46 H 0.084 0.916 47 H 0.112 0.888 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -31.059 4.534 3.031 31.534 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.055 4.945 3 H 0.276 0.724 4 C -0.200 4.200 5 C -0.113 4.113 6 C -0.136 4.136 7 H 0.150 0.850 8 C -0.190 4.190 9 C -0.012 4.012 10 H 0.086 0.914 11 N -0.346 5.346 12 C 0.392 3.608 13 O -0.472 6.472 14 C -0.351 4.351 15 C 0.024 3.976 16 C -0.138 4.138 17 C -0.039 4.039 18 C -0.186 4.186 19 O -0.368 6.368 20 Si 0.696 3.304 21 C -0.175 4.175 22 C -0.016 4.016 23 N -0.040 5.040 24 N -0.161 5.161 25 C -0.046 4.046 26 C -0.165 4.165 27 H 0.136 0.864 28 H 0.142 0.858 29 H 0.146 0.854 30 H 0.133 0.867 31 H 0.145 0.855 32 H 0.138 0.862 33 H 0.168 0.832 34 H 0.153 0.847 35 H 0.128 0.872 36 H 0.096 0.904 37 H 0.253 0.747 38 H 0.175 0.825 39 H 0.114 0.886 40 H 0.262 0.738 41 H -0.231 1.231 42 H -0.205 1.205 43 H 0.194 0.806 44 H 0.219 0.781 45 H 0.263 0.737 46 H 0.103 0.897 47 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -30.290 5.549 2.507 30.896 hybrid contribution -0.242 0.012 -0.066 0.251 sum -30.531 5.561 2.442 31.130 Atomic orbital electron populations 1.24122 0.75514 1.09419 1.09753 1.44818 1.15941 1.19268 1.14440 0.72392 1.24264 1.05575 1.02661 0.87471 1.23924 0.95243 1.03509 0.88628 1.22996 0.92602 1.00913 0.97076 0.85009 1.23790 0.97325 1.00260 0.97612 1.22008 0.85824 0.93987 0.99374 0.91367 1.45121 1.06433 1.10963 1.72071 1.16876 0.82578 0.86204 0.75145 1.90790 1.85084 1.17409 1.53894 1.19765 0.92636 0.94459 1.28272 1.19658 0.92819 0.87506 0.97588 1.20697 0.93745 0.96857 1.02509 1.19854 0.93001 0.95875 0.95141 1.24775 1.04495 0.94889 0.94427 1.86419 1.74899 1.45872 1.29581 0.94189 0.76441 0.86324 0.73464 1.21138 1.02855 0.90082 1.03396 1.22092 0.79876 1.02296 0.97376 1.46275 1.07965 1.06058 1.43752 1.77598 1.01007 1.07887 1.29638 1.24741 0.96273 0.92284 0.91275 1.23277 0.95305 1.01658 0.96253 0.86447 0.85768 0.85401 0.86657 0.85523 0.86212 0.83205 0.84675 0.87199 0.90382 0.74684 0.82477 0.88615 0.73838 1.23125 1.20463 0.80638 0.78125 0.73688 0.89697 0.87015 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.95 9.19 127.69 1.17 4.12 16 2 N -0.37 24.20 0.66 -948.87 -0.62 23.58 16 3 H 0.44 -30.65 8.41 -89.70 -0.75 -31.40 16 4 C -0.06 3.49 8.57 127.69 1.09 4.59 16 5 C 0.01 -0.54 4.57 86.30 0.39 -0.15 16 6 C -0.12 6.22 3.18 -10.27 -0.03 6.19 16 7 H 0.13 -7.48 8.10 -2.39 -0.02 -7.50 16 8 C -0.15 6.60 5.69 31.12 0.18 6.78 16 9 C 0.09 -3.09 4.32 45.52 0.20 -2.89 16 10 H 0.07 -1.61 7.46 -2.39 -0.02 -1.62 16 11 N -0.69 20.05 5.25 -444.08 -2.33 17.71 16 12 C 0.60 -9.52 7.78 86.41 0.67 -8.85 16 13 O -0.59 3.95 15.30 -4.42 -0.07 3.88 16 14 C -0.34 4.60 6.17 -19.90 -0.12 4.47 16 15 C 0.15 -1.19 6.76 39.50 0.27 -0.93 16 16 C -0.12 0.98 9.35 22.30 0.21 1.19 16 17 C -0.03 0.35 4.53 -19.81 -0.09 0.26 16 18 C -0.08 1.18 2.81 71.24 0.20 1.38 16 19 O -0.56 8.74 12.76 -148.98 -1.90 6.84 16 20 Si 0.79 -12.76 31.97 68.60 2.19 -10.57 16 21 C -0.15 1.84 8.67 22.03 0.19 2.03 16 22 C 0.11 -1.32 11.18 83.31 0.93 -0.39 16 23 N -0.28 2.47 3.86 -187.28 -0.72 1.74 16 24 N -0.34 3.76 12.58 -56.62 -0.71 3.05 16 25 C 0.14 -2.54 11.44 85.42 0.98 -1.56 16 26 C -0.13 5.43 7.39 31.12 0.23 5.66 16 27 H 0.12 -7.28 8.14 -2.39 -0.02 -7.30 16 28 H 0.12 -7.81 8.14 -2.39 -0.02 -7.83 16 29 H 0.13 -8.16 8.11 -2.39 -0.02 -8.18 16 30 H 0.12 -6.70 5.13 -2.39 -0.01 -6.71 16 31 H 0.13 -7.74 8.14 -2.39 -0.02 -7.76 16 32 H 0.12 -7.17 8.11 -2.39 -0.02 -7.19 16 33 H 0.15 -9.52 8.09 -2.39 -0.02 -9.54 16 34 H 0.14 -8.25 7.79 -2.39 -0.02 -8.26 16 35 H 0.11 -4.94 7.90 -2.39 -0.02 -4.96 16 36 H 0.08 -3.23 7.18 -2.38 -0.02 -3.24 16 37 H 0.42 -15.21 7.62 -92.71 -0.71 -15.92 16 38 H 0.16 -1.26 7.01 -2.91 -0.02 -1.28 16 39 H 0.10 -1.74 7.71 -2.38 -0.02 -1.76 16 40 H 0.41 -10.47 8.74 -74.06 -0.65 -11.12 16 41 H -0.30 2.47 7.11 99.48 0.71 3.18 16 42 H -0.28 3.07 7.07 99.48 0.70 3.78 16 43 H 0.18 -2.68 7.53 -2.91 -0.02 -2.71 16 44 H 0.20 -3.60 8.06 -2.91 -0.02 -3.63 16 45 H 0.25 -7.83 7.46 -2.91 -0.02 -7.86 16 46 H 0.08 -3.49 8.14 -2.39 -0.02 -3.51 16 47 H 0.11 -4.87 8.10 -2.38 -0.02 -4.89 16 Total: 1.00 -90.29 379.21 1.24 -89.05 By element: Atomic # 1 Polarization: -156.14 SS G_CDS: -1.06 Total: -157.20 kcal Atomic # 6 Polarization: 15.45 SS G_CDS: 6.47 Total: 21.92 kcal Atomic # 7 Polarization: 50.47 SS G_CDS: -4.39 Total: 46.08 kcal Atomic # 8 Polarization: 12.69 SS G_CDS: -1.97 Total: 10.72 kcal Atomic # 14 Polarization: -12.76 SS G_CDS: 2.19 Total: -10.57 kcal Total: -90.29 1.24 -89.05 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_11618758.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 261.400 kcal (2) G-P(sol) polarization free energy of solvation -90.286 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 171.114 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.240 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -89.046 kcal (6) G-S(sol) free energy of system = (1) + (5) 172.354 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds