Wall clock time and date at job start Sun Mar 7 2021 06:29:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42899 * 1 3 3 C 1.35714 * 116.99631 * 2 1 4 4 C 1.38688 * 119.86445 * 359.97231 * 3 2 1 5 5 C 1.38443 * 120.03210 * 179.97438 * 4 3 2 6 6 O 1.35659 * 120.11984 * 180.02562 * 5 4 3 7 7 C 1.42894 * 117.00001 * 359.97438 * 6 5 4 8 8 C 1.40298 * 119.75972 * 0.02562 * 5 4 3 9 9 C 1.47304 * 120.13639 * 179.97438 * 8 5 4 10 10 O 1.21615 * 119.99837 * 0.02562 * 9 8 5 11 11 N 1.34773 * 120.00003 * 179.97438 * 9 8 5 12 12 C 1.46493 * 119.99858 * 179.97438 * 11 9 8 13 13 H 1.08999 * 112.85366 * 23.81039 * 12 11 9 14 14 C 1.53789 * 113.61248 * 155.00239 * 12 11 9 15 15 C 1.53782 * 87.07993 * 89.12178 * 14 12 11 16 16 H 1.08999 * 113.61128 * 270.88374 * 15 14 12 17 17 C 1.52995 * 113.61690 * 140.06539 * 15 14 12 18 18 N 1.46904 * 109.47394 * 174.99827 * 17 15 14 19 19 H 1.00896 * 109.46512 * 54.99688 * 18 17 15 20 20 C 1.46897 * 109.47112 * 175.00250 * 18 17 15 21 21 C 1.46902 * 109.47022 * 295.00131 * 18 17 15 22 22 C 1.53778 * 113.61977 * 252.50204 * 12 11 9 23 23 C 1.39862 * 119.73007 * 359.75584 * 8 5 4 24 24 C 1.37545 * 119.96033 * 0.49887 * 23 8 5 25 25 C 1.50700 * 119.87930 * 179.75520 * 24 23 8 26 26 O 1.42896 * 109.47341 * 104.72006 * 25 24 23 27 27 Si 1.86300 * 109.46849 * 344.71893 * 25 24 23 28 28 H 1.08999 * 109.47260 * 60.00741 * 1 2 3 29 29 H 1.09003 * 109.47047 * 179.97438 * 1 2 3 30 30 H 1.08999 * 109.47711 * 300.00342 * 1 2 3 31 31 H 1.07994 * 119.98262 * 0.02562 * 4 3 2 32 32 H 1.08994 * 109.47720 * 300.00183 * 7 6 5 33 33 H 1.09008 * 109.47195 * 59.99892 * 7 6 5 34 34 H 1.09001 * 109.47014 * 179.97438 * 7 6 5 35 35 H 0.97002 * 119.99880 * 0.02562 * 11 9 8 36 36 H 1.09008 * 113.61265 * 203.66358 * 14 12 11 37 37 H 1.08993 * 113.61587 * 334.57082 * 14 12 11 38 38 H 1.08994 * 109.47056 * 294.99952 * 17 15 14 39 39 H 1.09006 * 109.47105 * 54.99780 * 17 15 14 40 40 H 1.08993 * 109.47623 * 60.00134 * 20 18 17 41 41 H 1.09003 * 109.46729 * 180.02562 * 20 18 17 42 42 H 1.08999 * 109.46893 * 299.99480 * 20 18 17 43 43 H 1.09004 * 109.47056 * 299.99925 * 21 18 17 44 44 H 1.09004 * 109.47023 * 59.99456 * 21 18 17 45 45 H 1.08992 * 109.47358 * 179.97438 * 21 18 17 46 46 H 1.09007 * 113.61424 * 25.43159 * 22 12 11 47 47 H 1.09003 * 113.62111 * 156.33886 * 22 12 11 48 48 H 1.08001 * 120.01950 * 180.26656 * 23 8 5 49 49 H 1.09000 * 109.46989 * 224.72337 * 25 24 23 50 50 H 0.96693 * 114.00306 * 299.99773 * 26 25 24 51 51 H 1.48506 * 110.00048 * 58.68772 * 27 25 24 52 52 H 1.48502 * 109.99996 * 180.02562 * 27 25 24 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0450 1.2093 0.0000 4 6 1.2869 2.3706 -0.0006 5 6 1.9117 3.6060 0.0000 6 8 1.1718 4.7430 -0.0001 7 6 -0.2492 4.5924 -0.0013 8 6 3.3128 3.6777 0.0005 9 6 3.9863 4.9878 0.0005 10 8 3.3276 6.0101 0.0005 11 7 5.3324 5.0535 0.0016 12 6 6.0021 6.3564 0.0011 13 1 5.3780 7.1533 0.4053 14 6 7.4191 6.3209 0.5978 15 6 7.9230 6.0018 -0.8197 16 1 7.9498 4.9354 -1.0437 17 6 9.2251 6.7181 -1.1830 18 7 9.6853 6.2593 -2.5006 19 1 8.9501 6.3924 -3.1786 20 6 10.8681 7.0320 -2.9025 21 6 10.0329 4.8338 -2.4287 22 6 6.6617 6.7095 -1.3424 23 6 4.0676 2.5003 0.0058 24 6 3.4351 1.2789 -0.0001 25 6 4.2503 0.0113 0.0000 26 8 4.2146 -0.5779 1.3013 27 14 6.0131 0.4067 -0.4546 28 1 -0.3634 0.5137 -0.8900 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3634 0.5139 0.8899 31 1 0.2086 2.3111 -0.0006 32 1 -0.5557 4.0435 -0.8917 33 1 -0.5570 4.0426 0.8883 34 1 -0.7188 5.5760 -0.0007 35 1 5.8578 4.2381 0.0020 36 1 7.7584 7.2858 0.9748 37 1 7.5732 5.5095 1.3090 38 1 9.0519 7.7937 -1.2130 39 1 9.9847 6.4931 -0.4343 40 1 11.6623 6.8882 -2.1700 41 1 11.2092 6.6919 -3.8803 42 1 10.6102 8.0897 -2.9559 43 1 10.8271 4.6899 -1.6961 44 1 9.1552 4.2604 -2.1303 45 1 10.3739 4.4932 -3.4063 46 1 6.2044 6.2117 -2.1976 47 1 6.7940 7.7806 -1.4959 48 1 5.1465 2.5500 0.0106 49 1 3.8356 -0.6873 -0.7268 50 1 4.5690 -0.0109 1.9997 51 1 6.5798 1.3829 0.5105 52 1 6.8274 -0.8351 -0.4587 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_12297780.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:30 Heat of formation + Delta-G solvation = 27.718561 kcal Electronic energy + Delta-G solvation = -32768.993428 eV Core-core repulsion = 28434.944073 eV Total energy + Delta-G solvation = -4334.049355 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.28462 -41.97871 -40.74749 -40.06085 -38.94405 -38.51498 -37.11253 -34.53339 -32.30670 -31.82779 -29.95679 -29.30427 -29.05625 -28.21041 -26.78555 -26.19003 -25.86435 -24.80628 -23.69912 -22.77751 -21.76108 -20.45866 -20.04613 -19.29319 -18.88886 -18.16667 -18.05401 -17.61842 -17.29243 -17.27449 -16.95282 -16.66391 -16.49468 -16.35408 -15.94163 -15.87654 -15.81617 -15.55628 -15.26407 -14.96130 -14.67337 -14.24480 -14.09021 -13.91914 -13.69812 -13.62844 -13.45308 -13.40782 -13.25087 -13.15638 -13.05577 -12.77391 -12.74405 -12.60498 -12.59536 -12.24933 -11.95681 -11.77552 -11.72706 -11.61452 -11.27582 -10.96974 -10.53898 -10.12399 -9.96399 -9.23683 -4.93767 -0.30087 0.03738 1.10256 1.30137 1.53386 1.69081 2.02871 2.05862 2.09863 2.12658 2.56389 2.98468 3.03090 3.24843 3.39180 3.44051 3.46709 3.51883 3.56693 3.68807 3.76691 3.83398 3.87856 3.96959 4.05673 4.10777 4.18733 4.19626 4.20545 4.21876 4.25787 4.33239 4.45382 4.50968 4.53286 4.57598 4.58967 4.61160 4.69778 4.74020 4.80434 4.82155 4.85811 4.91245 4.94477 4.95620 5.01791 5.03685 5.11011 5.22701 5.27181 5.61434 5.97217 6.22334 6.50386 6.56904 7.24746 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.010897 B = 0.003397 C = 0.002735 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2568.901811 B = 8240.234713 C =10235.899494 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.014 3.986 2 O -0.315 6.315 3 C 0.208 3.792 4 C -0.317 4.317 5 C 0.213 3.787 6 O -0.303 6.303 7 C 0.011 3.989 8 C -0.226 4.226 9 C 0.567 3.433 10 O -0.565 6.565 11 N -0.699 5.699 12 C 0.091 3.909 13 H 0.067 0.933 14 C -0.128 4.128 15 C -0.123 4.123 16 H 0.136 0.864 17 C 0.009 3.991 18 N -0.372 5.372 19 H 0.437 0.563 20 C -0.046 4.046 21 C -0.059 4.059 22 C -0.150 4.150 23 C 0.007 3.993 24 C -0.198 4.198 25 C -0.099 4.099 26 O -0.552 6.552 27 Si 0.795 3.205 28 H 0.072 0.928 29 H 0.116 0.884 30 H 0.064 0.936 31 H 0.154 0.846 32 H 0.071 0.929 33 H 0.065 0.935 34 H 0.113 0.887 35 H 0.413 0.587 36 H 0.111 0.889 37 H 0.084 0.916 38 H 0.139 0.861 39 H 0.143 0.857 40 H 0.120 0.880 41 H 0.125 0.875 42 H 0.122 0.878 43 H 0.122 0.878 44 H 0.128 0.872 45 H 0.127 0.873 46 H 0.081 0.919 47 H 0.109 0.891 48 H 0.177 0.823 49 H 0.101 0.899 50 H 0.384 0.616 51 H -0.231 1.231 52 H -0.311 1.311 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 25.913 11.367 -11.567 30.569 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.081 4.081 2 O -0.227 6.227 3 C 0.160 3.840 4 C -0.336 4.336 5 C 0.164 3.836 6 O -0.213 6.213 7 C -0.083 4.083 8 C -0.231 4.231 9 C 0.356 3.644 10 O -0.444 6.444 11 N -0.353 5.353 12 C -0.014 4.014 13 H 0.085 0.915 14 C -0.167 4.167 15 C -0.141 4.141 16 H 0.154 0.846 17 C -0.113 4.113 18 N 0.052 4.948 19 H 0.273 0.727 20 C -0.188 4.188 21 C -0.201 4.201 22 C -0.188 4.188 23 C -0.011 4.011 24 C -0.199 4.199 25 C -0.204 4.204 26 O -0.360 6.360 27 Si 0.696 3.304 28 H 0.090 0.910 29 H 0.134 0.866 30 H 0.083 0.917 31 H 0.171 0.829 32 H 0.089 0.911 33 H 0.084 0.916 34 H 0.131 0.869 35 H 0.251 0.749 36 H 0.129 0.871 37 H 0.102 0.898 38 H 0.157 0.843 39 H 0.161 0.839 40 H 0.138 0.862 41 H 0.143 0.857 42 H 0.140 0.860 43 H 0.140 0.860 44 H 0.146 0.854 45 H 0.145 0.855 46 H 0.100 0.900 47 H 0.127 0.873 48 H 0.194 0.806 49 H 0.119 0.881 50 H 0.232 0.768 51 H -0.156 1.156 52 H -0.240 1.240 Dipole moment (debyes) X Y Z Total from point charges 26.303 11.581 -11.456 30.938 hybrid contribution -2.038 -0.699 1.334 2.534 sum 24.265 10.881 -10.122 28.454 Atomic orbital electron populations 1.23421 0.76319 1.05838 1.02479 1.86144 1.23400 1.26622 1.86505 1.19113 0.92305 0.83869 0.88739 1.21435 1.01974 0.91179 1.19027 1.19092 0.90880 0.85156 0.88474 1.86341 1.20461 1.28469 1.86062 1.23430 0.76925 1.05505 1.02436 1.19180 0.90332 0.94318 1.19222 1.17925 0.83008 0.87811 0.75658 1.90859 1.65877 1.37072 1.50560 1.45335 1.04752 1.09658 1.75519 1.22011 0.94321 0.85246 0.99808 0.91485 1.23302 0.91989 1.04838 0.96567 1.23122 0.91848 1.02337 0.96795 0.84606 1.23904 0.98946 1.04141 0.84347 1.44804 1.17771 1.15699 1.16547 0.72678 1.24112 0.87875 1.00042 1.06811 1.24270 1.07865 0.78068 1.09849 1.23665 0.95640 1.02661 0.96838 1.21018 1.00423 0.88282 0.91381 1.19602 0.90846 0.96640 1.12824 1.25581 1.13205 0.94111 0.87542 1.86653 1.85628 1.46214 1.17523 0.94528 0.68946 0.80092 0.86812 0.90989 0.86612 0.91749 0.82868 0.91055 0.91614 0.86908 0.74900 0.87061 0.89771 0.84257 0.83866 0.86167 0.85686 0.85970 0.85955 0.85419 0.85463 0.90042 0.87302 0.80628 0.88082 0.76757 1.15572 1.23961 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.23 9.80 113.37 1.11 0.88 16 2 O -0.32 3.57 9.80 -90.36 -0.89 2.68 16 3 C 0.21 -2.76 6.67 22.61 0.15 -2.61 16 4 C -0.32 4.36 8.01 22.43 0.18 4.54 16 5 C 0.21 -2.49 6.70 22.82 0.15 -2.34 16 6 O -0.30 2.55 8.56 -68.78 -0.59 1.96 16 7 C 0.01 -0.18 9.81 113.37 1.11 0.94 16 8 C -0.23 3.75 5.89 -20.00 -0.12 3.63 16 9 C 0.57 -9.50 7.76 86.63 0.67 -8.82 16 10 O -0.56 3.43 14.75 16.89 0.25 3.68 16 11 N -0.70 20.67 5.21 -443.43 -2.31 18.36 16 12 C 0.09 -3.06 4.32 45.52 0.20 -2.86 16 13 H 0.07 -1.58 7.46 -2.39 -0.02 -1.59 16 14 C -0.13 5.58 7.39 31.12 0.23 5.81 16 15 C -0.12 6.62 3.45 -10.27 -0.04 6.58 16 16 H 0.14 -7.93 6.10 -2.39 -0.01 -7.94 16 17 C 0.01 -0.53 4.48 86.30 0.39 -0.15 16 18 N -0.37 24.88 0.66 -948.86 -0.62 24.25 16 19 H 0.44 -30.29 8.44 -89.70 -0.76 -31.05 16 20 C -0.05 2.99 9.19 127.69 1.17 4.16 16 21 C -0.06 3.81 8.98 127.69 1.15 4.96 16 22 C -0.15 6.63 7.43 31.12 0.23 6.86 16 23 C 0.01 -0.16 8.14 22.50 0.18 0.02 16 24 C -0.20 3.57 5.27 -19.80 -0.10 3.47 16 25 C -0.10 1.83 2.37 71.24 0.17 1.99 16 26 O -0.55 7.31 12.88 -148.98 -1.92 5.40 16 27 Si 0.80 -22.17 30.25 68.60 2.08 -20.10 16 28 H 0.07 -1.41 7.65 -2.39 -0.02 -1.43 16 29 H 0.12 -2.19 8.14 -2.39 -0.02 -2.21 16 30 H 0.06 -1.16 7.65 -2.39 -0.02 -1.18 16 31 H 0.15 -2.56 4.50 -2.91 -0.01 -2.57 16 32 H 0.07 -1.30 7.66 -2.39 -0.02 -1.32 16 33 H 0.07 -1.13 7.66 -2.38 -0.02 -1.15 16 34 H 0.11 -1.91 8.14 -2.39 -0.02 -1.93 16 35 H 0.41 -15.42 6.72 -92.71 -0.62 -16.05 16 36 H 0.11 -4.88 8.10 -2.38 -0.02 -4.90 16 37 H 0.08 -3.51 8.14 -2.39 -0.02 -3.53 16 38 H 0.14 -8.70 7.79 -2.39 -0.02 -8.71 16 39 H 0.14 -9.06 8.09 -2.38 -0.02 -9.08 16 40 H 0.12 -7.61 8.14 -2.39 -0.02 -7.63 16 41 H 0.12 -7.96 8.14 -2.39 -0.02 -7.98 16 42 H 0.12 -7.75 8.11 -2.39 -0.02 -7.77 16 43 H 0.12 -7.85 8.11 -2.38 -0.02 -7.87 16 44 H 0.13 -8.37 6.10 -2.39 -0.01 -8.38 16 45 H 0.13 -8.23 8.14 -2.39 -0.02 -8.25 16 46 H 0.08 -3.46 8.14 -2.38 -0.02 -3.48 16 47 H 0.11 -4.95 7.90 -2.39 -0.02 -4.96 16 48 H 0.18 -5.80 3.17 -2.91 -0.01 -5.81 16 49 H 0.10 -1.59 7.82 -2.39 -0.02 -1.60 16 50 H 0.38 -7.90 8.70 -74.06 -0.64 -8.55 16 51 H -0.23 7.48 6.67 99.48 0.66 8.14 16 52 H -0.31 5.44 7.11 99.48 0.71 6.14 16 Total: 1.00 -91.14 406.24 1.77 -89.37 By element: Atomic # 1 Polarization: -151.58 SS G_CDS: -1.07 Total: -152.65 kcal Atomic # 6 Polarization: 20.21 SS G_CDS: 6.84 Total: 27.05 kcal Atomic # 7 Polarization: 45.55 SS G_CDS: -2.94 Total: 42.62 kcal Atomic # 8 Polarization: 16.86 SS G_CDS: -3.14 Total: 13.71 kcal Atomic # 14 Polarization: -22.17 SS G_CDS: 2.08 Total: -20.10 kcal Total: -91.14 1.77 -89.37 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12297780.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 117.086 kcal (2) G-P(sol) polarization free energy of solvation -91.136 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 25.950 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.769 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -89.367 kcal (6) G-S(sol) free energy of system = (1) + (5) 27.719 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds