Wall clock time and date at job start Sun Mar 7 2021 06:29:38 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00908 * 109.46648 * 2 1 4 4 C 1.46899 * 109.47452 * 119.99938 * 2 1 3 5 5 C 1.46900 * 109.47448 * 240.00539 * 2 1 3 6 6 C 1.52997 * 109.47145 * 174.99596 * 5 2 1 7 7 H 1.09000 * 112.85409 * 316.19352 * 6 5 2 8 8 C 1.53785 * 113.61512 * 87.50224 * 6 5 2 9 9 C 1.53776 * 87.08390 * 139.97807 * 8 6 5 10 10 H 1.08995 * 113.69088 * 220.00557 * 9 8 6 11 11 N 1.46500 * 113.61171 * 89.11279 * 9 8 6 12 12 C 1.34782 * 119.99930 * 107.50641 * 11 9 8 13 13 O 1.21286 * 119.99605 * 359.97438 * 12 11 9 14 14 C 1.50696 * 120.00198 * 179.97438 * 12 11 9 15 15 C 1.50701 * 109.47189 * 179.97438 * 14 12 11 16 16 C 1.38231 * 120.00106 * 89.99954 * 15 14 12 17 17 C 1.38234 * 120.00098 * 180.02562 * 16 15 14 18 18 C 1.38234 * 120.00175 * 359.96146 * 17 16 15 19 19 C 1.50697 * 120.00438 * 180.02562 * 18 17 16 20 20 O 1.42905 * 109.46996 * 64.99275 * 19 18 17 21 21 Si 1.86301 * 109.47403 * 184.99539 * 19 18 17 22 22 C 1.38238 * 119.99500 * 0.27021 * 18 17 16 23 23 C 1.38232 * 120.00122 * 359.51943 * 22 18 17 24 24 C 1.53780 * 87.08216 * 334.56849 * 9 8 6 25 25 H 1.09006 * 109.46734 * 179.97438 * 1 2 3 26 26 H 1.08995 * 109.47335 * 299.99247 * 1 2 3 27 27 H 1.08992 * 109.47536 * 60.00217 * 1 2 3 28 28 H 1.09000 * 109.47158 * 59.99925 * 4 2 1 29 29 H 1.08994 * 109.47205 * 180.02562 * 4 2 1 30 30 H 1.09002 * 109.46876 * 300.00698 * 4 2 1 31 31 H 1.08994 * 109.46948 * 54.99248 * 5 2 1 32 32 H 1.08996 * 109.46657 * 294.99498 * 5 2 1 33 33 H 1.08999 * 113.61579 * 25.42893 * 8 6 5 34 34 H 1.09000 * 113.61062 * 254.53001 * 8 6 5 35 35 H 0.96999 * 120.00131 * 287.50234 * 11 9 8 36 36 H 1.09003 * 109.46830 * 60.00028 * 14 12 11 37 37 H 1.08996 * 109.47094 * 299.99968 * 14 12 11 38 38 H 1.08001 * 119.99991 * 359.97438 * 16 15 14 39 39 H 1.08002 * 120.00197 * 179.97438 * 17 16 15 40 40 H 1.09001 * 109.46613 * 304.99687 * 19 18 17 41 41 H 0.96696 * 114.00036 * 60.00342 * 20 19 18 42 42 H 1.48502 * 109.99925 * 58.67970 * 21 19 18 43 43 H 1.48497 * 109.99842 * 179.97438 * 21 19 18 44 44 H 1.08000 * 119.99674 * 179.73054 * 22 18 17 45 45 H 1.08003 * 119.99603 * 180.25459 * 23 22 18 46 46 H 1.08997 * 113.61826 * 139.97966 * 24 9 8 47 47 H 1.09002 * 113.61207 * 270.80362 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 3.4835 -0.5843 -1.2639 7 1 3.8473 0.4159 -1.0285 8 6 4.2132 -1.7026 -0.5010 9 6 5.2161 -1.7355 -1.6663 10 1 5.5295 -2.7412 -1.9461 11 7 6.3431 -0.8149 -1.4967 12 6 7.5688 -1.2960 -1.2089 13 8 7.7386 -2.4910 -1.0899 14 6 8.7282 -0.3492 -1.0350 15 6 9.9754 -1.1346 -0.7208 16 6 10.7901 -1.5772 -1.7460 17 6 11.9338 -2.2981 -1.4578 18 6 12.2633 -2.5756 -0.1444 19 6 13.5105 -3.3610 0.1699 20 8 14.6593 -2.6099 -0.2279 21 14 13.5899 -3.6939 2.0012 22 6 11.4460 -2.1371 0.8807 23 6 10.3046 -1.4125 0.5927 24 6 4.0891 -1.1735 -2.5488 25 1 -0.3633 -1.0277 -0.0005 26 1 -0.3634 0.5137 0.8900 27 1 -0.3634 0.5137 -0.8899 28 1 1.5954 -1.7201 1.1994 29 1 3.0487 -0.6920 1.1996 30 1 1.5953 -0.1787 2.0894 31 1 1.5240 -0.2329 -2.0871 32 1 1.6704 -1.7426 -1.1558 33 1 3.6285 -2.6172 -0.4023 34 1 4.6502 -1.3745 0.4421 35 1 6.2071 0.1408 -1.5915 36 1 8.5161 0.3382 -0.2161 37 1 8.8766 0.2163 -1.9549 38 1 10.5326 -1.3606 -2.7723 39 1 12.5702 -2.6443 -2.2589 40 1 13.4899 -4.3072 -0.3709 41 1 14.7421 -1.7540 0.2143 42 1 12.3850 -4.4469 2.4332 43 1 14.8151 -4.4684 2.3240 44 1 11.7011 -2.3577 1.9066 45 1 9.6683 -1.0664 1.3938 46 1 4.4260 -0.4182 -3.2589 47 1 3.4713 -1.9434 -3.0110 There are 57 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 57 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_12335836.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:29:38 Heat of formation + Delta-G solvation = 86.486495 kcal Electronic energy + Delta-G solvation = -24878.937015 eV Core-core repulsion = 21340.338032 eV Total energy + Delta-G solvation = -3538.598983 eV No. of doubly occupied orbitals = 57 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 306.186 amu Computer time = 0.70 seconds Orbital eigenvalues (eV) -42.27801 -41.20323 -40.34450 -39.02679 -37.65728 -34.57163 -33.93561 -31.97381 -30.49746 -29.54655 -29.37109 -26.70720 -26.19409 -25.50591 -23.86077 -23.80673 -22.50964 -21.42940 -20.57844 -19.09272 -18.50617 -18.25522 -17.71920 -17.38716 -17.22202 -16.91291 -16.52293 -16.28992 -16.06448 -15.65905 -15.53129 -15.04423 -14.81055 -14.72079 -14.55234 -14.15797 -14.03775 -13.76071 -13.57214 -13.54655 -13.30438 -13.28726 -13.13582 -13.03763 -12.86380 -12.69526 -12.30991 -12.14834 -12.04335 -11.75758 -11.65877 -11.35429 -11.04368 -10.49114 -10.08540 -9.91465 -9.65491 -5.09193 0.20240 0.41482 1.04044 1.24650 1.56286 1.58902 1.90792 2.10152 2.75080 2.88421 2.96579 3.21180 3.36669 3.46490 3.47883 3.59809 3.72650 3.75801 3.79843 3.87508 4.01047 4.02231 4.04996 4.19110 4.21045 4.31793 4.34503 4.41089 4.42847 4.44087 4.52959 4.59064 4.68985 4.71557 4.72620 4.77745 4.80746 4.85754 4.88349 4.96187 4.99069 5.04334 5.04824 5.16899 5.34359 5.51246 5.53663 5.58216 5.98626 6.51816 6.71458 7.26623 Molecular weight = 306.19amu Principal moments of inertia in cm(-1) A = 0.029872 B = 0.002466 C = 0.002359 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 937.118280 B =11353.161378 C =11867.564249 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.367 5.367 3 H 0.440 0.560 4 C -0.057 4.057 5 C 0.008 3.992 6 C -0.114 4.114 7 H 0.136 0.864 8 C -0.151 4.151 9 C 0.091 3.909 10 H 0.060 0.940 11 N -0.700 5.700 12 C 0.514 3.486 13 O -0.582 6.582 14 C -0.097 4.097 15 C -0.072 4.072 16 C -0.118 4.118 17 C -0.113 4.113 18 C -0.129 4.129 19 C -0.079 4.079 20 O -0.557 6.557 21 Si 0.784 3.216 22 C -0.123 4.123 23 C -0.107 4.107 24 C -0.129 4.129 25 H 0.115 0.885 26 H 0.125 0.875 27 H 0.127 0.873 28 H 0.117 0.883 29 H 0.117 0.883 30 H 0.128 0.872 31 H 0.149 0.851 32 H 0.132 0.868 33 H 0.104 0.896 34 H 0.082 0.918 35 H 0.420 0.580 36 H 0.141 0.859 37 H 0.126 0.874 38 H 0.130 0.870 39 H 0.115 0.885 40 H 0.097 0.903 41 H 0.395 0.605 42 H -0.288 1.288 43 H -0.305 1.305 44 H 0.142 0.858 45 H 0.150 0.850 46 H 0.085 0.915 47 H 0.106 0.894 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -35.611 15.835 2.951 39.085 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.199 4.199 5 C -0.114 4.114 6 C -0.133 4.133 7 H 0.153 0.847 8 C -0.190 4.190 9 C -0.015 4.015 10 H 0.079 0.921 11 N -0.353 5.353 12 C 0.302 3.698 13 O -0.461 6.461 14 C -0.137 4.137 15 C -0.072 4.072 16 C -0.136 4.136 17 C -0.131 4.131 18 C -0.130 4.130 19 C -0.189 4.189 20 O -0.365 6.365 21 Si 0.690 3.310 22 C -0.141 4.141 23 C -0.124 4.124 24 C -0.167 4.167 25 H 0.134 0.866 26 H 0.144 0.856 27 H 0.146 0.854 28 H 0.135 0.865 29 H 0.136 0.864 30 H 0.146 0.854 31 H 0.167 0.833 32 H 0.150 0.850 33 H 0.122 0.878 34 H 0.101 0.899 35 H 0.258 0.742 36 H 0.158 0.842 37 H 0.144 0.856 38 H 0.148 0.852 39 H 0.133 0.867 40 H 0.114 0.886 41 H 0.245 0.755 42 H -0.215 1.215 43 H -0.233 1.233 44 H 0.159 0.841 45 H 0.168 0.832 46 H 0.104 0.896 47 H 0.124 0.876 Dipole moment (debyes) X Y Z Total from point charges -35.489 13.628 3.276 38.157 hybrid contribution 0.587 -0.342 -0.962 1.178 sum -34.902 13.286 2.314 37.417 Atomic orbital electron populations 1.24119 0.75585 1.09340 1.09799 1.44808 1.15892 1.19295 1.14397 0.72279 1.24267 1.05662 1.02551 0.87467 1.23916 0.95462 1.03361 0.88689 1.22983 0.92415 1.00984 0.96895 0.84653 1.23763 0.97350 1.00063 0.97775 1.21962 0.86364 0.93962 0.99240 0.92143 1.45491 1.06923 1.11118 1.71784 1.20976 0.84841 0.88913 0.75087 1.90790 1.84946 1.18882 1.51476 1.20763 0.88561 0.96986 1.07355 1.19630 0.95883 0.98510 0.93204 1.21240 0.94596 0.98006 0.99795 1.21094 0.97224 0.98600 0.96227 1.20379 0.97533 1.00633 0.94423 1.25212 0.84445 0.96241 1.12961 1.86477 1.43228 1.36306 1.70502 0.93813 0.75972 0.86588 0.74601 1.21194 0.95635 0.98728 0.98495 1.21263 0.96598 0.97857 0.96720 1.23265 0.95523 1.01562 0.96390 0.86610 0.85650 0.85434 0.86479 0.86429 0.85393 0.83316 0.84989 0.87803 0.89913 0.74162 0.84165 0.85556 0.85207 0.86680 0.88560 0.75469 1.21464 1.23322 0.84054 0.83221 0.89633 0.87608 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.01 9.19 127.69 1.17 4.18 16 2 N -0.37 24.65 0.66 -948.89 -0.62 24.03 16 3 H 0.44 -31.47 8.41 -89.69 -0.75 -32.23 16 4 C -0.06 3.57 8.57 127.69 1.09 4.67 16 5 C 0.01 -0.48 4.57 86.30 0.39 -0.09 16 6 C -0.11 6.27 3.18 -10.27 -0.03 6.23 16 7 H 0.14 -8.00 8.09 -2.39 -0.02 -8.02 16 8 C -0.15 6.87 5.69 31.12 0.18 7.05 16 9 C 0.09 -3.19 4.32 45.52 0.20 -2.99 16 10 H 0.06 -1.48 7.46 -2.39 -0.02 -1.49 16 11 N -0.70 23.77 5.26 -440.04 -2.32 21.45 16 12 C 0.51 -11.98 7.82 87.65 0.69 -11.29 16 13 O -0.58 6.10 15.63 -3.05 -0.05 6.06 16 14 C -0.10 2.62 5.83 29.10 0.17 2.79 16 15 C -0.07 1.22 4.37 -19.87 -0.09 1.14 16 16 C -0.12 1.50 9.70 22.27 0.22 1.72 16 17 C -0.11 1.01 9.69 22.27 0.22 1.23 16 18 C -0.13 1.29 5.35 -19.87 -0.11 1.19 16 19 C -0.08 0.73 2.80 71.23 0.20 0.93 16 20 O -0.56 4.72 12.83 -148.98 -1.91 2.81 16 21 Si 0.78 -9.07 29.80 68.60 2.04 -7.03 16 22 C -0.12 1.69 8.67 22.27 0.19 1.88 16 23 C -0.11 1.78 9.70 22.27 0.22 2.00 16 24 C -0.13 5.71 7.39 31.12 0.23 5.94 16 25 H 0.12 -7.26 8.14 -2.38 -0.02 -7.27 16 26 H 0.13 -8.02 8.14 -2.39 -0.02 -8.04 16 27 H 0.13 -8.26 8.11 -2.39 -0.02 -8.27 16 28 H 0.12 -7.13 8.11 -2.39 -0.02 -7.15 16 29 H 0.12 -7.10 5.13 -2.39 -0.01 -7.11 16 30 H 0.13 -8.04 8.14 -2.39 -0.02 -8.06 16 31 H 0.15 -9.57 8.09 -2.39 -0.02 -9.59 16 32 H 0.13 -8.11 7.79 -2.39 -0.02 -8.13 16 33 H 0.10 -4.75 7.90 -2.39 -0.02 -4.76 16 34 H 0.08 -3.68 7.18 -2.39 -0.02 -3.69 16 35 H 0.42 -17.62 8.70 -92.71 -0.81 -18.42 16 36 H 0.14 -4.76 8.09 -2.39 -0.02 -4.78 16 37 H 0.13 -3.87 8.09 -2.39 -0.02 -3.89 16 38 H 0.13 -2.04 8.06 -2.91 -0.02 -2.06 16 39 H 0.12 -0.92 8.06 -2.91 -0.02 -0.94 16 40 H 0.10 -0.65 7.96 -2.39 -0.02 -0.66 16 41 H 0.40 -6.80 8.70 -74.06 -0.64 -7.44 16 42 H -0.29 2.01 7.11 99.48 0.71 2.72 16 43 H -0.30 0.94 7.11 99.48 0.71 1.65 16 44 H 0.14 -2.51 4.91 -2.91 -0.01 -2.52 16 45 H 0.15 -3.43 8.06 -2.91 -0.02 -3.46 16 46 H 0.09 -3.66 8.14 -2.39 -0.02 -3.68 16 47 H 0.11 -4.64 8.10 -2.39 -0.02 -4.66 16 Total: 1.00 -89.00 372.82 0.89 -88.11 By element: Atomic # 1 Polarization: -160.80 SS G_CDS: -1.19 Total: -161.99 kcal Atomic # 6 Polarization: 21.63 SS G_CDS: 4.94 Total: 26.57 kcal Atomic # 7 Polarization: 48.42 SS G_CDS: -2.94 Total: 45.48 kcal Atomic # 8 Polarization: 10.82 SS G_CDS: -1.96 Total: 8.86 kcal Atomic # 14 Polarization: -9.07 SS G_CDS: 2.04 Total: -7.03 kcal Total: -89.00 0.89 -88.11 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12335836.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 174.592 kcal (2) G-P(sol) polarization free energy of solvation -88.995 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 85.597 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.889 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.106 kcal (6) G-S(sol) free energy of system = (1) + (5) 86.486 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds