Wall clock time and date at job start Sun Mar 7 2021 06:30:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00906 * 109.47112 * 2 1 4 4 C 1.46900 * 109.47081 * 120.00203 * 2 1 3 5 5 C 1.46901 * 109.47092 * 240.00426 * 2 1 3 6 6 C 1.52990 * 109.47276 * 64.99475 * 5 2 1 7 7 H 1.09000 * 112.90908 * 43.75450 * 6 5 2 8 8 C 1.53786 * 113.61464 * 175.00079 * 6 5 2 9 9 C 1.53781 * 87.17350 * 140.02626 * 8 6 5 10 10 H 1.09000 * 113.61379 * 219.89528 * 9 8 6 11 11 N 1.46505 * 113.61334 * 89.07333 * 9 8 6 12 12 C 1.34776 * 119.99597 * 154.99978 * 11 9 8 13 13 O 1.21698 * 120.00616 * 0.02562 * 12 11 9 14 14 C 1.46435 * 119.99785 * 180.02562 * 12 11 9 15 15 C 1.34800 * 119.99790 * 180.02562 * 14 12 11 16 16 C 1.47213 * 119.99760 * 179.97438 * 15 14 12 17 17 C 1.39827 * 120.17022 * 359.72447 * 16 15 14 18 18 C 1.37895 * 119.82693 * 179.79128 * 17 16 15 19 19 C 1.38397 * 120.16880 * 0.45984 * 18 17 16 20 20 C 1.50707 * 119.82728 * 179.76733 * 19 18 17 21 21 O 1.42898 * 109.46935 * 245.02384 * 20 19 18 22 22 Si 1.86300 * 109.46893 * 5.02321 * 20 19 18 23 23 C 1.38407 * 120.34639 * 359.79238 * 19 18 17 24 24 C 1.37891 * 120.16847 * 359.97438 * 23 19 18 25 25 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 26 26 H 1.09002 * 109.47028 * 59.99466 * 1 2 3 27 27 H 1.09001 * 109.47292 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46999 * 299.99922 * 1 2 3 29 29 H 1.09003 * 109.47106 * 180.02562 * 4 2 1 30 30 H 1.09003 * 109.47102 * 299.99811 * 4 2 1 31 31 H 1.08997 * 109.47302 * 60.00226 * 4 2 1 32 32 H 1.09007 * 109.46470 * 304.99885 * 5 2 1 33 33 H 1.08994 * 109.47025 * 185.00260 * 5 2 1 34 34 H 1.09002 * 113.61357 * 25.43543 * 8 6 5 35 35 H 1.09002 * 113.61608 * 254.61705 * 8 6 5 36 36 H 0.96995 * 120.00170 * 335.00476 * 11 9 8 37 37 H 1.08001 * 119.99822 * 359.97438 * 14 12 11 38 38 H 1.08006 * 120.00398 * 359.97438 * 15 14 12 39 39 H 1.08000 * 120.08931 * 0.02562 * 17 16 15 40 40 H 1.08001 * 119.91291 * 180.23422 * 18 17 16 41 41 H 1.09002 * 109.46743 * 125.02327 * 20 19 18 42 42 H 0.96698 * 113.99592 * 179.97438 * 21 20 19 43 43 H 1.48500 * 109.99861 * 178.68270 * 22 20 19 44 44 H 1.48504 * 110.00032 * 300.00009 * 22 20 19 45 45 H 1.07999 * 119.91108 * 179.97438 * 23 19 18 46 46 H 1.08000 * 120.08442 * 179.97438 * 24 23 19 47 47 H 1.09005 * 113.61471 * 139.98321 * 25 9 8 48 48 H 1.08996 * 113.61178 * 270.79663 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 1.5538 0.0977 -2.4455 7 1 1.7106 1.1709 -2.3368 8 6 2.1234 -0.4787 -3.7525 9 6 0.7633 -0.1610 -4.3960 10 1 0.4146 -0.9320 -5.0831 11 7 0.6840 1.1866 -4.9654 12 6 -0.1845 1.4467 -5.9626 13 8 -0.9032 0.5624 -6.3898 14 6 -0.2634 2.7935 -6.5321 15 6 -1.1324 3.0538 -7.5291 16 6 -1.2122 4.4078 -8.1012 17 6 -0.3922 5.4280 -7.6092 18 6 -0.4697 6.6927 -8.1532 19 6 -1.3628 6.9559 -9.1771 20 6 -1.4447 8.3422 -9.7625 21 8 -2.7302 8.9012 -9.4848 22 14 -0.1239 9.4154 -9.0045 23 6 -2.1815 5.9527 -9.6660 24 6 -2.1124 4.6818 -9.1356 25 6 0.1591 -0.2705 -2.9861 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.0487 -0.6921 1.1996 30 1 1.5953 -0.1787 2.0894 31 1 1.5954 -1.7202 1.1994 32 1 1.5240 -1.6910 -1.2454 33 1 3.0449 -0.7707 -1.1558 34 1 2.3432 -1.5451 -3.7001 35 1 2.9478 0.1036 -4.1639 36 1 1.2566 1.8915 -4.6247 37 1 0.3741 3.5784 -6.1526 38 1 -1.7703 2.2689 -7.9083 39 1 0.3027 5.2251 -6.8077 40 1 0.1657 7.4808 -7.7768 41 1 -1.2963 8.2905 -10.8411 42 1 -2.8538 9.7950 -9.8327 43 1 -0.1736 10.7764 -9.5965 44 1 -0.3152 9.4939 -7.5340 45 1 -2.8762 6.1660 -10.4650 46 1 -2.7521 3.9001 -9.5179 47 1 -0.6024 0.4810 -2.7778 48 1 -0.1594 -1.2796 -2.7249 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:22 Heat of formation + Delta-G solvation = 135.110359 kcal Electronic energy + Delta-G solvation = -25533.184530 eV Core-core repulsion = 21868.467895 eV Total energy + Delta-G solvation = -3664.716635 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.186 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -44.54636 -42.31096 -41.31503 -40.46485 -38.48409 -35.93526 -35.72956 -32.97742 -32.51263 -32.00794 -31.83526 -28.59598 -28.34766 -27.75851 -26.03863 -24.91875 -24.60403 -22.96722 -22.30891 -21.40622 -21.36485 -20.21964 -19.83592 -19.47115 -19.15899 -18.51344 -18.11993 -17.56965 -17.38532 -17.21596 -16.90526 -16.62486 -16.39650 -16.18092 -16.05484 -15.98724 -15.95485 -15.78237 -15.56720 -15.43334 -15.16559 -15.06842 -14.74214 -14.62455 -14.45955 -14.31541 -14.07510 -13.76366 -13.37547 -13.09101 -12.96688 -12.73731 -12.34047 -12.07878 -11.97588 -11.34355 -11.12695 -10.68297 -10.02011 -5.59180 -1.46659 -1.34590 -0.31063 0.10226 0.48451 0.53022 0.63922 0.69951 0.90422 0.98598 1.27258 1.31397 1.33951 1.38914 1.62840 1.66103 1.77490 1.83690 1.94645 2.00772 2.04017 2.16884 2.20416 2.28221 2.32624 2.34703 2.62887 2.69444 2.94456 2.96105 2.98852 3.10854 3.13183 3.16315 3.22210 3.30490 3.33336 3.36182 3.58917 3.60154 3.66314 3.82751 4.10498 4.17181 4.23048 4.30944 4.36016 4.64242 4.81124 4.82694 5.17025 5.33355 5.80801 6.17541 Molecular weight = 318.19amu Principal moments of inertia in cm(-1) A = 0.019476 B = 0.002093 C = 0.001977 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1437.349399 B =13376.231007 C =14160.140499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.386 5.386 3 H 0.426 0.574 4 C -0.048 4.048 5 C 0.000 4.000 6 C -0.148 4.148 7 H 0.112 0.888 8 C -0.131 4.131 9 C 0.125 3.875 10 H 0.114 0.886 11 N -0.718 5.718 12 C 0.555 3.445 13 O -0.534 6.534 14 C -0.235 4.235 15 C 0.007 3.993 16 C -0.085 4.085 17 C -0.092 4.092 18 C -0.119 4.119 19 C -0.052 4.052 20 C -0.082 4.082 21 O -0.535 6.535 22 Si 0.685 3.315 23 C -0.094 4.094 24 C -0.087 4.087 25 C -0.159 4.159 26 H 0.126 0.874 27 H 0.122 0.878 28 H 0.123 0.877 29 H 0.123 0.877 30 H 0.124 0.876 31 H 0.122 0.878 32 H 0.132 0.868 33 H 0.132 0.868 34 H 0.107 0.893 35 H 0.090 0.910 36 H 0.402 0.598 37 H 0.131 0.869 38 H 0.138 0.862 39 H 0.131 0.869 40 H 0.132 0.868 41 H 0.081 0.919 42 H 0.383 0.617 43 H -0.259 1.259 44 H -0.255 1.255 45 H 0.132 0.868 46 H 0.133 0.867 47 H 0.084 0.916 48 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.524 -14.128 26.066 31.809 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.039 4.961 3 H 0.261 0.739 4 C -0.190 4.190 5 C -0.121 4.121 6 C -0.166 4.166 7 H 0.130 0.870 8 C -0.169 4.169 9 C 0.019 3.981 10 H 0.132 0.868 11 N -0.370 5.370 12 C 0.346 3.654 13 O -0.411 6.411 14 C -0.256 4.256 15 C -0.013 4.013 16 C -0.085 4.085 17 C -0.110 4.110 18 C -0.136 4.136 19 C -0.052 4.052 20 C -0.192 4.192 21 O -0.343 6.343 22 Si 0.586 3.414 23 C -0.112 4.112 24 C -0.105 4.105 25 C -0.197 4.197 26 H 0.144 0.856 27 H 0.141 0.859 28 H 0.141 0.859 29 H 0.142 0.858 30 H 0.143 0.857 31 H 0.140 0.860 32 H 0.150 0.850 33 H 0.151 0.849 34 H 0.126 0.874 35 H 0.109 0.891 36 H 0.236 0.764 37 H 0.149 0.851 38 H 0.156 0.844 39 H 0.148 0.852 40 H 0.149 0.851 41 H 0.098 0.902 42 H 0.232 0.768 43 H -0.184 1.184 44 H -0.180 1.180 45 H 0.149 0.851 46 H 0.151 0.849 47 H 0.103 0.897 48 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 11.002 -14.892 26.515 32.340 hybrid contribution -0.618 1.348 -0.070 1.485 sum 10.384 -13.544 26.445 31.474 Atomic orbital electron populations 1.24316 0.75929 1.09778 1.09715 1.45087 1.16438 1.18899 1.15678 0.73925 1.24142 1.05636 1.02494 0.86721 1.24120 1.05079 0.99946 0.82961 1.23301 0.99849 1.00631 0.92867 0.87041 1.23327 0.98111 1.03261 0.92238 1.21653 0.95497 0.86523 0.94437 0.86761 1.45522 1.41983 1.11287 1.38200 1.18411 0.79314 0.88961 0.78742 1.90880 1.42292 1.47498 1.60451 1.22714 1.04791 0.95806 1.02261 1.22492 0.93224 0.94595 0.90985 1.19009 0.98588 0.92948 0.97974 1.21267 0.98317 0.92144 0.99260 1.20961 0.99158 0.97314 0.96217 1.19493 0.96112 0.93915 0.95713 1.24875 0.93648 0.96937 1.03719 1.86573 1.31417 1.35074 1.81248 0.95101 0.85804 0.80167 0.80370 1.21039 0.98083 0.92053 1.00011 1.21472 0.97027 0.97113 0.94895 1.23880 0.94807 1.03543 0.97504 0.85569 0.85922 0.85858 0.85832 0.85745 0.85966 0.85018 0.84946 0.87432 0.89141 0.76375 0.85119 0.84384 0.85176 0.85074 0.90155 0.76826 1.18359 1.18020 0.85051 0.84880 0.89717 0.87911 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 1.71 8.57 60.07 0.51 2.23 16 2 N -0.39 12.62 0.66 -251.26 -0.17 12.45 16 3 H 0.43 -14.68 8.41 -39.29 -0.33 -15.01 16 4 C -0.05 1.53 9.19 60.06 0.55 2.08 16 5 C 0.00 -0.01 4.57 -3.83 -0.02 -0.03 16 6 C -0.15 3.93 3.19 -89.67 -0.29 3.64 16 7 H 0.11 -3.09 8.10 -51.93 -0.42 -3.51 16 8 C -0.13 2.90 7.38 -25.92 -0.19 2.71 16 9 C 0.13 -2.28 4.32 -67.11 -0.29 -2.57 16 10 H 0.11 -1.67 7.46 -51.93 -0.39 -2.05 16 11 N -0.72 11.75 5.26 -54.40 -0.29 11.46 16 12 C 0.56 -6.20 7.74 -12.96 -0.10 -6.30 16 13 O -0.53 3.44 15.83 5.19 0.08 3.52 16 14 C -0.24 2.74 9.41 -37.50 -0.35 2.38 16 15 C 0.01 -0.06 9.46 -37.16 -0.35 -0.41 16 16 C -0.09 0.73 5.87 -105.06 -0.62 0.11 16 17 C -0.09 0.87 9.41 -39.11 -0.37 0.50 16 18 C -0.12 0.98 8.65 -39.65 -0.34 0.64 16 19 C -0.05 0.35 5.39 -104.50 -0.56 -0.21 16 20 C -0.08 0.60 2.79 36.01 0.10 0.70 16 21 O -0.54 3.04 12.81 -35.23 -0.45 2.59 16 22 Si 0.68 -5.55 29.83 -169.99 -5.07 -10.62 16 23 C -0.09 0.63 9.66 -39.65 -0.38 0.25 16 24 C -0.09 0.67 9.80 -39.11 -0.38 0.29 16 25 C -0.16 3.61 5.71 -25.78 -0.15 3.46 16 26 H 0.13 -3.73 5.14 -51.93 -0.27 -4.00 16 27 H 0.12 -3.73 8.11 -51.93 -0.42 -4.15 16 28 H 0.12 -3.81 8.14 -51.93 -0.42 -4.23 16 29 H 0.12 -3.91 8.11 -51.93 -0.42 -4.33 16 30 H 0.12 -3.92 8.14 -51.93 -0.42 -4.34 16 31 H 0.12 -3.81 8.14 -51.93 -0.42 -4.23 16 32 H 0.13 -3.99 7.80 -51.93 -0.41 -4.39 16 33 H 0.13 -4.09 8.09 -51.93 -0.42 -4.51 16 34 H 0.11 -2.41 8.10 -51.93 -0.42 -2.83 16 35 H 0.09 -1.91 8.14 -51.93 -0.42 -2.33 16 36 H 0.40 -7.79 8.68 -40.82 -0.35 -8.14 16 37 H 0.13 -1.89 6.07 -52.49 -0.32 -2.21 16 38 H 0.14 -1.21 7.52 -52.48 -0.39 -1.61 16 39 H 0.13 -1.63 6.17 -52.49 -0.32 -1.96 16 40 H 0.13 -1.29 4.84 -52.49 -0.25 -1.54 16 41 H 0.08 -0.70 7.96 -51.93 -0.41 -1.11 16 42 H 0.38 -3.56 8.74 45.56 0.40 -3.16 16 43 H -0.26 1.40 7.11 56.52 0.40 1.80 16 44 H -0.26 1.40 7.04 56.52 0.40 1.80 16 45 H 0.13 -0.95 8.06 -52.49 -0.42 -1.37 16 46 H 0.13 -1.23 8.06 -52.49 -0.42 -1.65 16 47 H 0.08 -1.85 7.20 -51.93 -0.37 -2.22 16 48 H 0.10 -2.40 7.91 -51.93 -0.41 -2.81 16 LS Contribution 382.75 15.07 5.77 5.77 Total: 1.00 -38.42 382.75 -11.03 -49.45 By element: Atomic # 1 Polarization: -76.42 SS G_CDS: -7.68 Total: -84.10 kcal Atomic # 6 Polarization: 12.71 SS G_CDS: -3.23 Total: 9.48 kcal Atomic # 7 Polarization: 24.37 SS G_CDS: -0.45 Total: 23.92 kcal Atomic # 8 Polarization: 6.48 SS G_CDS: -0.37 Total: 6.11 kcal Atomic # 14 Polarization: -5.55 SS G_CDS: -5.07 Total: -10.62 kcal Total LS contribution 5.77 Total: 5.77 kcal Total: -38.42 -11.03 -49.45 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 184.558 kcal (2) G-P(sol) polarization free energy of solvation -38.421 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 146.137 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.027 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.448 kcal (6) G-S(sol) free energy of system = (1) + (5) 135.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds