Wall clock time and date at job start Sun Mar 7 2021 06:30:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00906 * 109.47112 * 2 1 4 4 C 1.46900 * 109.47081 * 120.00203 * 2 1 3 5 5 C 1.46901 * 109.47092 * 240.00426 * 2 1 3 6 6 C 1.52990 * 109.47276 * 64.99475 * 5 2 1 7 7 H 1.09000 * 112.90908 * 43.75450 * 6 5 2 8 8 C 1.53786 * 113.61464 * 175.00079 * 6 5 2 9 9 C 1.53781 * 87.17350 * 140.02626 * 8 6 5 10 10 H 1.09000 * 113.61379 * 219.89528 * 9 8 6 11 11 N 1.46505 * 113.61334 * 89.07333 * 9 8 6 12 12 C 1.34776 * 119.99597 * 154.99978 * 11 9 8 13 13 O 1.21698 * 120.00616 * 0.02562 * 12 11 9 14 14 C 1.46435 * 119.99785 * 180.02562 * 12 11 9 15 15 C 1.34800 * 119.99790 * 180.02562 * 14 12 11 16 16 C 1.47213 * 119.99760 * 179.97438 * 15 14 12 17 17 C 1.39827 * 120.17022 * 359.72447 * 16 15 14 18 18 C 1.37895 * 119.82693 * 179.79128 * 17 16 15 19 19 C 1.38397 * 120.16880 * 0.45984 * 18 17 16 20 20 C 1.50707 * 119.82728 * 179.76733 * 19 18 17 21 21 O 1.42898 * 109.46935 * 245.02384 * 20 19 18 22 22 Si 1.86300 * 109.46893 * 5.02321 * 20 19 18 23 23 C 1.38407 * 120.34639 * 359.79238 * 19 18 17 24 24 C 1.37891 * 120.16847 * 359.97438 * 23 19 18 25 25 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 26 26 H 1.09002 * 109.47028 * 59.99466 * 1 2 3 27 27 H 1.09001 * 109.47292 * 180.02562 * 1 2 3 28 28 H 1.09003 * 109.46999 * 299.99922 * 1 2 3 29 29 H 1.09003 * 109.47106 * 180.02562 * 4 2 1 30 30 H 1.09003 * 109.47102 * 299.99811 * 4 2 1 31 31 H 1.08997 * 109.47302 * 60.00226 * 4 2 1 32 32 H 1.09007 * 109.46470 * 304.99885 * 5 2 1 33 33 H 1.08994 * 109.47025 * 185.00260 * 5 2 1 34 34 H 1.09002 * 113.61357 * 25.43543 * 8 6 5 35 35 H 1.09002 * 113.61608 * 254.61705 * 8 6 5 36 36 H 0.96995 * 120.00170 * 335.00476 * 11 9 8 37 37 H 1.08001 * 119.99822 * 359.97438 * 14 12 11 38 38 H 1.08006 * 120.00398 * 359.97438 * 15 14 12 39 39 H 1.08000 * 120.08931 * 0.02562 * 17 16 15 40 40 H 1.08001 * 119.91291 * 180.23422 * 18 17 16 41 41 H 1.09002 * 109.46743 * 125.02327 * 20 19 18 42 42 H 0.96698 * 113.99592 * 179.97438 * 21 20 19 43 43 H 1.48500 * 109.99861 * 178.68270 * 22 20 19 44 44 H 1.48504 * 110.00032 * 300.00009 * 22 20 19 45 45 H 1.07999 * 119.91108 * 179.97438 * 23 19 18 46 46 H 1.08000 * 120.08442 * 179.97438 * 24 23 19 47 47 H 1.09005 * 113.61471 * 139.98321 * 25 9 8 48 48 H 1.08996 * 113.61178 * 270.79663 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 1.5538 0.0977 -2.4455 7 1 1.7106 1.1709 -2.3368 8 6 2.1234 -0.4787 -3.7525 9 6 0.7633 -0.1610 -4.3960 10 1 0.4146 -0.9320 -5.0831 11 7 0.6840 1.1866 -4.9654 12 6 -0.1845 1.4467 -5.9626 13 8 -0.9032 0.5624 -6.3898 14 6 -0.2634 2.7935 -6.5321 15 6 -1.1324 3.0538 -7.5291 16 6 -1.2122 4.4078 -8.1012 17 6 -0.3922 5.4280 -7.6092 18 6 -0.4697 6.6927 -8.1532 19 6 -1.3628 6.9559 -9.1771 20 6 -1.4447 8.3422 -9.7625 21 8 -2.7302 8.9012 -9.4848 22 14 -0.1239 9.4154 -9.0045 23 6 -2.1815 5.9527 -9.6660 24 6 -2.1124 4.6818 -9.1356 25 6 0.1591 -0.2705 -2.9861 26 1 -0.3633 0.5139 -0.8900 27 1 -0.3634 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 3.0487 -0.6921 1.1996 30 1 1.5953 -0.1787 2.0894 31 1 1.5954 -1.7202 1.1994 32 1 1.5240 -1.6910 -1.2454 33 1 3.0449 -0.7707 -1.1558 34 1 2.3432 -1.5451 -3.7001 35 1 2.9478 0.1036 -4.1639 36 1 1.2566 1.8915 -4.6247 37 1 0.3741 3.5784 -6.1526 38 1 -1.7703 2.2689 -7.9083 39 1 0.3027 5.2251 -6.8077 40 1 0.1657 7.4808 -7.7768 41 1 -1.2963 8.2905 -10.8411 42 1 -2.8538 9.7950 -9.8327 43 1 -0.1736 10.7764 -9.5965 44 1 -0.3152 9.4939 -7.5340 45 1 -2.8762 6.1660 -10.4650 46 1 -2.7521 3.9001 -9.5179 47 1 -0.6024 0.4810 -2.7778 48 1 -0.1594 -1.2796 -2.7249 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_12360594.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:21 Heat of formation + Delta-G solvation = 108.999321 kcal Electronic energy + Delta-G solvation = -25534.316789 eV Core-core repulsion = 21868.467895 eV Total energy + Delta-G solvation = -3665.848894 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 318.186 amu Computer time = 0.75 seconds Orbital eigenvalues (eV) -42.25984 -41.00851 -40.50791 -39.08738 -37.90156 -35.20902 -34.49950 -32.25664 -31.42934 -30.11102 -29.49677 -27.31804 -26.68217 -25.86170 -24.43553 -24.00517 -23.45201 -22.11451 -20.73285 -20.34100 -19.11670 -18.71698 -18.59920 -17.81860 -17.44013 -17.36269 -16.96116 -16.64860 -16.16427 -16.03140 -15.72977 -15.39171 -15.09881 -15.04711 -14.70158 -14.37324 -14.07332 -14.04333 -13.91270 -13.76440 -13.58910 -13.54520 -13.51763 -13.28885 -13.06357 -13.04967 -12.73524 -12.34149 -12.13624 -12.09518 -11.75543 -11.66621 -11.36306 -11.34164 -11.13709 -10.53793 -10.13778 -10.01374 -9.27064 -4.96671 -0.58759 0.36313 0.84003 1.04668 1.26135 1.57757 1.91266 2.09499 2.18444 2.74009 2.88872 2.97463 3.21411 3.33506 3.36445 3.48017 3.54413 3.71122 3.76162 3.80257 3.82111 3.90481 4.03846 4.13617 4.17807 4.19740 4.21538 4.28942 4.34896 4.35710 4.41679 4.51620 4.54174 4.72246 4.72959 4.78108 4.79513 4.81323 4.85525 4.88942 4.94063 4.95891 5.04050 5.06205 5.12751 5.16593 5.35107 5.46352 5.55267 5.57345 5.86219 6.49692 6.50578 7.19972 Molecular weight = 318.19amu Principal moments of inertia in cm(-1) A = 0.019476 B = 0.002093 C = 0.001977 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1437.349399 B =13376.231007 C =14160.140499 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.368 5.368 3 H 0.439 0.561 4 C -0.046 4.046 5 C 0.008 3.992 6 C -0.116 4.116 7 H 0.133 0.867 8 C -0.126 4.126 9 C 0.088 3.912 10 H 0.065 0.935 11 N -0.693 5.693 12 C 0.544 3.456 13 O -0.593 6.593 14 C -0.208 4.208 15 C -0.023 4.023 16 C -0.082 4.082 17 C -0.090 4.090 18 C -0.125 4.125 19 C -0.075 4.075 20 C -0.096 4.096 21 O -0.560 6.560 22 Si 0.773 3.227 23 C -0.112 4.112 24 C -0.106 4.106 25 C -0.152 4.152 26 H 0.116 0.884 27 H 0.118 0.882 28 H 0.127 0.873 29 H 0.128 0.872 30 H 0.124 0.876 31 H 0.116 0.884 32 H 0.134 0.866 33 H 0.151 0.849 34 H 0.110 0.890 35 H 0.086 0.914 36 H 0.420 0.580 37 H 0.168 0.832 38 H 0.118 0.882 39 H 0.167 0.833 40 H 0.148 0.852 41 H 0.090 0.910 42 H 0.395 0.605 43 H -0.296 1.296 44 H -0.288 1.288 45 H 0.125 0.875 46 H 0.135 0.865 47 H 0.079 0.921 48 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 14.118 -14.007 29.239 35.361 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.188 4.188 5 C -0.114 4.114 6 C -0.134 4.134 7 H 0.151 0.849 8 C -0.165 4.165 9 C -0.017 4.017 10 H 0.083 0.917 11 N -0.344 5.344 12 C 0.334 3.666 13 O -0.476 6.476 14 C -0.228 4.228 15 C -0.043 4.043 16 C -0.082 4.082 17 C -0.107 4.107 18 C -0.142 4.142 19 C -0.075 4.075 20 C -0.204 4.204 21 O -0.370 6.370 22 Si 0.678 3.322 23 C -0.130 4.130 24 C -0.124 4.124 25 C -0.190 4.190 26 H 0.134 0.866 27 H 0.137 0.863 28 H 0.145 0.855 29 H 0.146 0.854 30 H 0.143 0.857 31 H 0.135 0.865 32 H 0.152 0.848 33 H 0.168 0.832 34 H 0.128 0.872 35 H 0.104 0.896 36 H 0.259 0.741 37 H 0.186 0.814 38 H 0.136 0.864 39 H 0.185 0.815 40 H 0.165 0.835 41 H 0.108 0.892 42 H 0.245 0.755 43 H -0.224 1.224 44 H -0.215 1.215 45 H 0.143 0.857 46 H 0.153 0.847 47 H 0.097 0.903 48 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 13.640 -14.764 29.717 35.876 hybrid contribution -1.426 1.213 -1.013 2.129 sum 12.215 -13.550 28.704 34.011 Atomic orbital electron populations 1.24263 0.76875 1.09473 1.09352 1.44816 1.15430 1.19560 1.14637 0.72338 1.24122 1.05834 1.02259 0.86602 1.23921 1.06117 0.99360 0.81954 1.23029 0.95442 1.02150 0.92793 0.84883 1.23263 0.95365 1.03735 0.94123 1.22023 0.99797 0.84275 0.95641 0.91681 1.45345 1.40169 1.12673 1.36243 1.18675 0.79640 0.88661 0.79586 1.90856 1.44939 1.49130 1.62628 1.23041 1.03267 0.96227 1.00266 1.22336 0.94989 0.93979 0.92955 1.19133 0.98185 0.93524 0.97402 1.21640 0.98256 0.91190 0.99636 1.21202 0.98958 0.98311 0.95762 1.19694 0.97031 0.94017 0.96801 1.25177 0.93394 0.97197 1.04677 1.86535 1.32623 1.36186 1.81652 0.94144 0.84273 0.77001 0.76793 1.21096 0.98689 0.92711 1.00497 1.21622 0.97939 0.97019 0.95790 1.23827 0.97037 1.03959 0.94208 0.86609 0.86314 0.85481 0.85363 0.85746 0.86511 0.84790 0.83163 0.87212 0.89564 0.74136 0.81439 0.86387 0.81545 0.83507 0.89209 0.75487 1.22410 1.21487 0.85745 0.84683 0.90281 0.87423 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.52 8.57 127.69 1.09 4.62 16 2 N -0.37 24.42 0.66 -948.84 -0.62 23.79 16 3 H 0.44 -31.03 8.41 -89.69 -0.75 -31.79 16 4 C -0.05 2.97 9.19 127.69 1.17 4.15 16 5 C 0.01 -0.52 4.57 86.30 0.39 -0.13 16 6 C -0.12 6.23 3.19 -10.18 -0.03 6.20 16 7 H 0.13 -7.69 8.10 -2.39 -0.02 -7.70 16 8 C -0.13 5.53 7.38 31.12 0.23 5.76 16 9 C 0.09 -3.00 4.32 45.52 0.20 -2.81 16 10 H 0.06 -1.56 7.46 -2.39 -0.02 -1.57 16 11 N -0.69 21.74 5.26 -444.24 -2.34 19.40 16 12 C 0.54 -10.82 7.74 86.38 0.67 -10.15 16 13 O -0.59 4.97 15.83 -4.34 -0.07 4.90 16 14 C -0.21 4.64 9.41 23.62 0.22 4.87 16 15 C -0.02 0.37 9.46 23.84 0.23 0.60 16 16 C -0.08 1.26 5.87 -20.15 -0.12 1.14 16 17 C -0.09 1.69 9.41 22.57 0.21 1.90 16 18 C -0.13 1.98 8.65 22.23 0.19 2.17 16 19 C -0.08 0.87 5.39 -19.78 -0.11 0.77 16 20 C -0.10 1.24 2.79 71.24 0.20 1.44 16 21 O -0.56 5.14 12.81 -148.98 -1.91 3.23 16 22 Si 0.77 -11.81 29.83 68.60 2.05 -9.77 16 23 C -0.11 1.16 9.66 22.23 0.21 1.37 16 24 C -0.11 1.29 9.80 22.57 0.22 1.51 16 25 C -0.15 6.73 5.71 31.21 0.18 6.90 16 26 H 0.12 -6.82 5.14 -2.39 -0.01 -6.83 16 27 H 0.12 -7.15 8.11 -2.39 -0.02 -7.17 16 28 H 0.13 -7.85 8.14 -2.39 -0.02 -7.86 16 29 H 0.13 -8.26 8.11 -2.39 -0.02 -8.28 16 30 H 0.12 -7.89 8.14 -2.39 -0.02 -7.91 16 31 H 0.12 -7.29 8.14 -2.39 -0.02 -7.30 16 32 H 0.13 -8.22 7.80 -2.38 -0.02 -8.24 16 33 H 0.15 -9.63 8.09 -2.39 -0.02 -9.65 16 34 H 0.11 -4.83 8.10 -2.39 -0.02 -4.85 16 35 H 0.09 -3.64 8.14 -2.39 -0.02 -3.66 16 36 H 0.42 -16.53 8.68 -92.71 -0.80 -17.34 16 37 H 0.17 -5.16 6.07 -2.91 -0.02 -5.17 16 38 H 0.12 -1.52 7.52 -2.91 -0.02 -1.54 16 39 H 0.17 -4.53 6.17 -2.91 -0.02 -4.55 16 40 H 0.15 -2.92 4.84 -2.91 -0.01 -2.93 16 41 H 0.09 -1.40 7.96 -2.39 -0.02 -1.42 16 42 H 0.39 -6.50 8.74 -74.06 -0.65 -7.14 16 43 H -0.30 2.74 7.11 99.48 0.71 3.44 16 44 H -0.29 2.89 7.04 99.48 0.70 3.59 16 45 H 0.12 -1.30 8.06 -2.91 -0.02 -1.32 16 46 H 0.14 -1.92 8.06 -2.91 -0.02 -1.94 16 47 H 0.08 -3.35 7.20 -2.38 -0.02 -3.37 16 48 H 0.11 -4.86 7.91 -2.39 -0.02 -4.88 16 Total: 1.00 -86.60 382.75 1.08 -85.52 By element: Atomic # 1 Polarization: -156.20 SS G_CDS: -1.20 Total: -157.40 kcal Atomic # 6 Polarization: 25.15 SS G_CDS: 5.17 Total: 30.31 kcal Atomic # 7 Polarization: 46.15 SS G_CDS: -2.96 Total: 43.19 kcal Atomic # 8 Polarization: 10.11 SS G_CDS: -1.98 Total: 8.13 kcal Atomic # 14 Polarization: -11.81 SS G_CDS: 2.05 Total: -9.77 kcal Total: -86.60 1.08 -85.52 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12360594.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 194.523 kcal (2) G-P(sol) polarization free energy of solvation -86.604 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.919 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.080 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.524 kcal (6) G-S(sol) free energy of system = (1) + (5) 108.999 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.75 seconds