Wall clock time and date at job start Sun Mar 7 2021 06:30:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00901 * 109.47628 * 2 1 4 4 C 1.46902 * 109.46784 * 239.99818 * 2 1 3 5 5 C 1.46896 * 109.47230 * 120.00490 * 2 1 3 6 6 C 1.53000 * 109.47497 * 185.00191 * 5 2 1 7 7 H 1.09000 * 112.85377 * 45.32418 * 6 5 2 8 8 C 1.53777 * 113.61712 * 176.52795 * 6 5 2 9 9 C 1.53783 * 87.08377 * 139.97642 * 8 6 5 10 10 H 1.09000 * 113.61363 * 219.93324 * 9 8 6 11 11 N 1.46501 * 113.61418 * 89.11364 * 9 8 6 12 12 C 1.34778 * 119.99979 * 155.00443 * 11 9 8 13 13 O 1.21573 * 120.00017 * 359.97438 * 12 11 9 14 14 C 1.47696 * 120.00124 * 180.02562 * 12 11 9 15 15 C 1.39799 * 120.15370 * 179.97438 * 14 12 11 16 16 F 1.35100 * 120.08529 * 0.02562 * 15 14 12 17 17 C 1.38318 * 119.83021 * 179.97438 * 15 14 12 18 18 C 1.38188 * 120.14220 * 359.97438 * 17 15 14 19 19 C 1.50698 * 119.83731 * 180.02562 * 18 17 15 20 20 O 1.42901 * 109.47328 * 15.00106 * 19 18 17 21 21 Si 1.86299 * 109.47053 * 134.99817 * 19 18 17 22 22 C 1.38658 * 120.31695 * 0.03832 * 18 17 15 23 23 F 1.35099 * 119.91488 * 180.02562 * 22 18 17 24 24 C 1.38068 * 120.16477 * 359.68318 * 22 18 17 25 25 C 1.53793 * 113.60851 * 274.13286 * 6 5 2 26 26 H 1.09002 * 109.47401 * 179.97438 * 1 2 3 27 27 H 1.09001 * 109.46874 * 59.99876 * 1 2 3 28 28 H 1.09004 * 109.46970 * 300.00010 * 1 2 3 29 29 H 1.09002 * 109.47411 * 300.00312 * 4 2 1 30 30 H 1.09001 * 109.47165 * 60.00484 * 4 2 1 31 31 H 1.09004 * 109.46739 * 179.97438 * 4 2 1 32 32 H 1.09009 * 109.46823 * 304.99749 * 5 2 1 33 33 H 1.09000 * 109.47775 * 64.99580 * 5 2 1 34 34 H 1.08998 * 113.61609 * 254.52404 * 8 6 5 35 35 H 1.08999 * 113.61744 * 25.42589 * 8 6 5 36 36 H 0.97000 * 119.99982 * 334.99754 * 11 9 8 37 37 H 1.07997 * 119.92873 * 179.97438 * 17 15 14 38 38 H 1.09001 * 109.47033 * 254.99680 * 19 18 17 39 39 H 0.96698 * 114.00502 * 59.99659 * 20 19 18 40 40 H 1.48497 * 110.00245 * 179.97438 * 21 19 18 41 41 H 1.48501 * 110.00263 * 301.31732 * 21 19 18 42 42 H 1.08000 * 120.07271 * 180.30146 * 24 22 18 43 43 H 1.08993 * 113.61197 * 334.56355 * 25 6 5 44 44 H 1.08998 * 113.61221 * 105.47085 * 25 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6926 -1.1995 5 6 1.9587 -0.6926 1.1993 6 6 3.4835 -0.5846 1.2639 7 1 3.8459 0.4218 1.0545 8 6 4.0921 -1.2072 2.5315 9 6 5.2180 -1.7443 1.6322 10 1 5.5329 -2.7568 1.8846 11 7 6.3438 -0.8184 1.4850 12 6 7.5693 -1.2904 1.1822 13 8 7.7407 -2.4845 1.0316 14 6 8.7044 -0.3570 1.0344 15 6 9.9771 -0.8432 0.7209 16 9 10.1728 -2.1692 0.5514 17 6 11.0352 0.0370 0.5835 18 6 10.8361 1.3936 0.7550 19 6 11.9937 2.3464 0.6032 20 8 13.0779 1.6792 -0.0460 21 14 11.4633 3.8100 -0.4202 22 6 9.5764 1.8823 1.0664 23 9 9.3908 3.2102 1.2317 24 6 8.5099 1.0159 1.2008 25 6 4.2128 -1.6799 0.4678 26 1 -0.3634 -1.0277 -0.0005 27 1 -0.3633 0.5139 -0.8900 28 1 -0.3633 0.5139 0.8900 29 1 1.5952 -1.7202 -1.1995 30 1 1.5953 -0.1787 -2.0894 31 1 3.0486 -0.6922 -1.1997 32 1 1.5241 -0.2330 2.0871 33 1 1.6703 -1.7428 1.1557 34 1 4.4296 -0.4708 3.2608 35 1 3.4751 -1.9897 2.9731 36 1 6.2071 0.1343 1.6055 37 1 12.0192 -0.3369 0.3417 38 1 12.3144 2.6883 1.5873 39 1 12.8638 1.3475 -0.9287 40 1 12.5958 4.7576 -0.5768 41 1 10.9937 3.3543 -1.7533 42 1 7.5283 1.3986 1.4386 43 1 3.6288 -2.5919 0.3443 44 1 4.6475 -1.3245 -0.4664 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_12360598.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:25 Heat of formation + Delta-G solvation = 10.489090 kcal Electronic energy + Delta-G solvation = -28410.922151 eV Core-core repulsion = 24085.657341 eV Total energy + Delta-G solvation = -4325.264810 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 328.151 amu Computer time = 0.60 seconds Orbital eigenvalues (eV) -50.32166 -50.16858 -42.30232 -41.33766 -40.18493 -39.03992 -37.82274 -34.85903 -32.97673 -31.47163 -30.15047 -29.49615 -28.01869 -26.68328 -25.87671 -24.33732 -24.24378 -23.48574 -22.12220 -20.69325 -19.62956 -19.17180 -18.98928 -18.55431 -17.93761 -17.87005 -17.48570 -17.31875 -17.17817 -16.76221 -16.66135 -16.09495 -16.02204 -15.85268 -15.75691 -15.52803 -15.14955 -14.92907 -14.54042 -14.15442 -14.04309 -13.87091 -13.73652 -13.54822 -13.52121 -13.31264 -13.27081 -13.07473 -13.00178 -12.72402 -12.70494 -12.15950 -12.09694 -11.67008 -11.36035 -11.33876 -11.16199 -10.34398 -10.17669 -9.78151 -4.87065 -0.82183 -0.31173 1.05407 1.06736 1.41795 1.51283 1.78937 1.90191 2.24632 2.73473 2.80550 2.90610 2.98850 3.06625 3.12105 3.23983 3.36344 3.40972 3.48077 3.51059 3.74840 3.79408 3.80459 4.05573 4.16414 4.21618 4.23327 4.30493 4.36428 4.38174 4.43317 4.54303 4.58455 4.69923 4.72352 4.74263 4.74686 4.80251 4.81398 4.87338 4.90700 4.95995 5.04390 5.13834 5.36682 5.49167 6.28965 6.29859 7.00092 Molecular weight = 328.15amu Principal moments of inertia in cm(-1) A = 0.015908 B = 0.003124 C = 0.002782 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1759.671808 B = 8960.305345 C =10063.289992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.367 5.367 3 H 0.440 0.560 4 C -0.058 4.058 5 C 0.008 3.992 6 C -0.118 4.118 7 H 0.137 0.863 8 C -0.125 4.125 9 C 0.089 3.911 10 H 0.068 0.932 11 N -0.686 5.686 12 C 0.561 3.439 13 O -0.566 6.566 14 C -0.159 4.159 15 C 0.131 3.869 16 F -0.133 7.133 17 C -0.134 4.134 18 C -0.091 4.091 19 C -0.088 4.088 20 O -0.545 6.545 21 Si 0.758 3.242 22 C 0.086 3.914 23 F -0.090 7.090 24 C -0.058 4.058 25 C -0.153 4.153 26 H 0.115 0.885 27 H 0.123 0.877 28 H 0.128 0.872 29 H 0.117 0.883 30 H 0.126 0.874 31 H 0.118 0.882 32 H 0.151 0.849 33 H 0.133 0.867 34 H 0.089 0.911 35 H 0.111 0.889 36 H 0.420 0.580 37 H 0.156 0.844 38 H 0.143 0.857 39 H 0.390 0.610 40 H -0.299 1.299 41 H -0.278 1.278 42 H 0.203 0.797 43 H 0.109 0.891 44 H 0.082 0.918 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -34.791 4.701 -1.428 35.136 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.057 4.943 3 H 0.277 0.723 4 C -0.201 4.201 5 C -0.114 4.114 6 C -0.136 4.136 7 H 0.155 0.845 8 C -0.164 4.164 9 C -0.016 4.016 10 H 0.086 0.914 11 N -0.339 5.339 12 C 0.348 3.652 13 O -0.445 6.445 14 C -0.164 4.164 15 C 0.110 3.890 16 F -0.111 7.111 17 C -0.152 4.152 18 C -0.092 4.092 19 C -0.196 4.196 20 O -0.353 6.353 21 Si 0.661 3.339 22 C 0.067 3.933 23 F -0.068 7.068 24 C -0.076 4.076 25 C -0.191 4.191 26 H 0.134 0.866 27 H 0.142 0.858 28 H 0.147 0.853 29 H 0.136 0.864 30 H 0.144 0.856 31 H 0.136 0.864 32 H 0.169 0.831 33 H 0.151 0.849 34 H 0.108 0.892 35 H 0.129 0.871 36 H 0.260 0.740 37 H 0.174 0.826 38 H 0.161 0.839 39 H 0.240 0.760 40 H -0.227 1.227 41 H -0.204 1.204 42 H 0.220 0.780 43 H 0.127 0.873 44 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges -34.379 4.187 -1.704 34.675 hybrid contribution 1.611 -0.877 -0.618 1.936 sum -32.768 3.310 -2.321 33.016 Atomic orbital electron populations 1.24119 0.75635 1.09334 1.09769 1.44796 1.15841 1.19315 1.14391 0.72251 1.24288 1.05707 1.02581 0.87507 1.23924 0.95376 1.03441 0.88682 1.23037 0.92540 1.01159 0.96868 0.84480 1.23272 0.95030 1.01733 0.96344 1.22134 0.85823 0.93877 0.99810 0.91360 1.45290 1.06397 1.11694 1.70512 1.17993 0.83633 0.86900 0.76638 1.90911 1.84698 1.17743 1.51185 1.19842 0.92665 0.94864 1.08992 1.18039 0.94011 0.77902 0.99021 1.91590 1.95650 1.31744 1.92106 1.20855 0.99768 0.91657 1.02962 1.20499 0.95435 0.94665 0.98629 1.25274 0.87268 1.01313 1.05739 1.86618 1.37064 1.76207 1.35442 0.94140 0.84225 0.76953 0.78539 1.17110 0.92955 0.78736 1.04528 1.91250 1.94528 1.29127 1.91893 1.21362 1.00750 0.89048 0.96473 1.23847 0.97216 1.00542 0.97525 0.86604 0.85804 0.85349 0.86408 0.85571 0.86385 0.83130 0.84901 0.89206 0.87116 0.74025 0.82610 0.83939 0.75993 1.22732 1.20387 0.78040 0.87297 0.89918 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.05 9.19 127.69 1.17 4.22 16 2 N -0.37 24.92 0.66 -948.81 -0.62 24.30 16 3 H 0.44 -31.88 8.42 -89.69 -0.75 -32.64 16 4 C -0.06 3.68 8.55 127.69 1.09 4.77 16 5 C 0.01 -0.49 4.57 86.30 0.39 -0.10 16 6 C -0.12 6.61 3.22 -10.26 -0.03 6.58 16 7 H 0.14 -8.34 8.11 -2.39 -0.02 -8.36 16 8 C -0.13 5.78 7.39 31.12 0.23 6.01 16 9 C 0.09 -3.23 4.33 45.58 0.20 -3.03 16 10 H 0.07 -1.79 7.46 -2.39 -0.02 -1.80 16 11 N -0.69 23.09 5.21 -442.75 -2.31 20.78 16 12 C 0.56 -11.54 7.77 86.74 0.67 -10.86 16 13 O -0.57 4.86 14.94 -3.95 -0.06 4.80 16 14 C -0.16 3.38 5.88 -20.06 -0.12 3.26 16 15 C 0.13 -1.84 7.28 22.67 0.17 -1.68 16 16 F -0.13 0.82 15.55 44.97 0.70 1.52 16 17 C -0.13 2.21 9.20 22.28 0.20 2.42 16 18 C -0.09 1.80 5.14 -19.78 -0.10 1.70 16 19 C -0.09 1.59 2.96 71.24 0.21 1.80 16 20 O -0.55 7.65 11.63 -148.98 -1.73 5.92 16 21 Si 0.76 -13.47 29.56 68.60 2.03 -11.44 16 22 C 0.09 -2.17 6.65 22.33 0.15 -2.02 16 23 F -0.09 2.42 13.69 44.97 0.62 3.04 16 24 C -0.06 1.69 9.51 22.57 0.21 1.91 16 25 C -0.15 7.14 5.60 31.18 0.17 7.31 16 26 H 0.12 -7.33 8.14 -2.39 -0.02 -7.35 16 27 H 0.12 -7.97 8.14 -2.39 -0.02 -7.99 16 28 H 0.13 -8.41 8.11 -2.38 -0.02 -8.42 16 29 H 0.12 -7.24 8.11 -2.39 -0.02 -7.26 16 30 H 0.13 -7.94 8.14 -2.39 -0.02 -7.96 16 31 H 0.12 -7.17 5.02 -2.39 -0.01 -7.19 16 32 H 0.15 -9.91 8.09 -2.38 -0.02 -9.93 16 33 H 0.13 -8.35 7.82 -2.39 -0.02 -8.37 16 34 H 0.09 -4.04 8.14 -2.39 -0.02 -4.06 16 35 H 0.11 -5.10 8.10 -2.39 -0.02 -5.11 16 36 H 0.42 -17.85 6.73 -92.71 -0.62 -18.47 16 37 H 0.16 -2.51 7.06 -2.91 -0.02 -2.53 16 38 H 0.14 -2.79 7.96 -2.39 -0.02 -2.81 16 39 H 0.39 -7.78 8.42 -74.06 -0.62 -8.41 16 40 H -0.30 2.56 7.11 99.48 0.71 3.27 16 41 H -0.28 3.90 7.11 99.48 0.71 4.60 16 42 H 0.20 -8.26 6.41 -2.91 -0.02 -8.28 16 43 H 0.11 -5.16 7.92 -2.39 -0.02 -5.17 16 44 H 0.08 -3.74 7.15 -2.39 -0.02 -3.75 16 Total: 1.00 -89.13 356.15 2.34 -86.79 By element: Atomic # 1 Polarization: -157.08 SS G_CDS: -0.91 Total: -157.99 kcal Atomic # 6 Polarization: 17.66 SS G_CDS: 4.63 Total: 22.29 kcal Atomic # 7 Polarization: 48.01 SS G_CDS: -2.93 Total: 45.08 kcal Atomic # 8 Polarization: 12.51 SS G_CDS: -1.79 Total: 10.72 kcal Atomic # 9 Polarization: 3.24 SS G_CDS: 1.31 Total: 4.55 kcal Atomic # 14 Polarization: -13.47 SS G_CDS: 2.03 Total: -11.44 kcal Total: -89.13 2.34 -86.79 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12360598.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 97.280 kcal (2) G-P(sol) polarization free energy of solvation -89.132 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 8.148 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 2.341 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.791 kcal (6) G-S(sol) free energy of system = (1) + (5) 10.489 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.60 seconds