Wall clock time and date at job start Sun Mar 7 2021 06:30:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46903 * 1 3 3 H 1.00902 * 109.47152 * 2 1 4 4 C 1.46901 * 109.47237 * 120.00061 * 2 1 3 5 5 C 1.46899 * 109.46572 * 240.00116 * 2 1 3 6 6 C 1.53000 * 109.47305 * 64.99975 * 5 2 1 7 7 H 1.08999 * 112.84876 * 43.80350 * 6 5 2 8 8 C 1.53785 * 113.61503 * 174.99721 * 6 5 2 9 9 C 1.53773 * 87.07897 * 139.98116 * 8 6 5 10 10 H 1.09010 * 113.61772 * 219.93503 * 9 8 6 11 11 N 1.46498 * 113.61788 * 89.11861 * 9 8 6 12 12 C 1.34779 * 120.00686 * 154.99484 * 11 9 8 13 13 O 1.21626 * 119.99284 * 0.02562 * 12 11 9 14 14 C 1.47290 * 120.00122 * 180.02562 * 12 11 9 15 15 C 1.40372 * 120.04196 * 180.02562 * 14 12 11 16 16 O 1.35679 * 120.13897 * 0.03573 * 15 14 12 17 17 C 1.38317 * 119.72402 * 180.02562 * 15 14 12 18 18 C 1.39574 * 119.81356 * 359.97438 * 17 15 14 19 19 C 1.47564 * 119.95358 * 180.02562 * 18 17 15 20 20 C 1.36105 * 125.93937 * 180.02562 * 19 18 17 21 21 C 1.40800 * 106.73149 * 180.02562 * 20 19 18 22 22 C 1.34828 * 107.04950 * 0.02562 * 21 20 19 23 23 C 1.50704 * 125.65392 * 180.02562 * 22 21 20 24 24 O 1.42901 * 109.47055 * 64.94671 * 23 22 21 25 25 Si 1.86298 * 109.47325 * 184.94819 * 23 22 21 26 26 O 1.34228 * 108.69468 * 359.97438 * 22 21 20 27 27 C 1.39967 * 120.08547 * 0.28144 * 18 17 15 28 28 C 1.36387 * 120.27960 * 359.43640 * 27 18 17 29 29 C 1.53781 * 87.08725 * 334.56642 * 9 8 6 30 30 H 1.08992 * 109.47243 * 59.99823 * 1 2 3 31 31 H 1.08993 * 109.47220 * 180.02562 * 1 2 3 32 32 H 1.09005 * 109.46544 * 299.99799 * 1 2 3 33 33 H 1.09000 * 109.46779 * 179.97438 * 4 2 1 34 34 H 1.08991 * 109.47067 * 299.99863 * 4 2 1 35 35 H 1.09002 * 109.46968 * 60.00227 * 4 2 1 36 36 H 1.09000 * 109.47593 * 304.99412 * 5 2 1 37 37 H 1.09007 * 109.47167 * 184.99865 * 5 2 1 38 38 H 1.09003 * 113.61273 * 25.43196 * 8 6 5 39 39 H 1.08995 * 113.69065 * 254.54497 * 8 6 5 40 40 H 0.96999 * 119.99857 * 335.00277 * 11 9 8 41 41 H 0.96698 * 114.00227 * 269.97874 * 16 15 14 42 42 H 1.08002 * 120.09528 * 180.02562 * 17 15 14 43 43 H 1.08000 * 126.63644 * 359.75947 * 20 19 18 44 44 H 1.08003 * 126.47630 * 179.97438 * 21 20 19 45 45 H 1.09002 * 109.47084 * 304.94960 * 23 22 21 46 46 H 0.96703 * 113.99513 * 60.00256 * 24 23 22 47 47 H 1.48503 * 109.99810 * 58.67965 * 25 23 22 48 48 H 1.48497 * 110.00134 * 179.97438 * 25 23 22 49 49 H 1.07997 * 119.85853 * 179.72649 * 27 18 17 50 50 H 1.07997 * 119.90994 * 180.27269 * 28 27 18 51 51 H 1.08995 * 113.61564 * 139.97625 * 29 9 8 52 52 H 1.09000 * 113.61343 * 270.89105 * 29 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9586 -0.6925 -1.1995 6 6 1.5538 0.0977 -2.4455 7 1 1.7118 1.1706 -2.3362 8 6 2.1232 -0.4788 -3.7526 9 6 0.7620 -0.1611 -4.3935 10 1 0.4118 -0.9324 -5.0797 11 7 0.6817 1.1861 -4.9633 12 6 -0.1886 1.4460 -5.9590 13 8 -0.9077 0.5621 -6.3842 14 6 -0.2689 2.8005 -6.5322 15 6 -1.1754 3.0723 -7.5689 16 8 -1.9803 2.0893 -8.0452 17 6 -1.2450 4.3464 -8.1027 18 6 -0.4144 5.3527 -7.6070 19 6 -0.4863 6.7132 -8.1738 20 6 0.2629 7.7810 -7.7855 21 6 -0.1337 8.8678 -8.5880 22 6 -1.0956 8.4161 -9.4179 23 6 -1.8147 9.2362 -10.4579 24 8 -0.8861 9.6550 -11.4600 25 14 -3.1539 8.2066 -11.2436 26 8 -1.3056 7.1147 -9.1651 27 6 0.4905 5.0716 -6.5768 28 6 0.5580 3.8180 -6.0439 29 6 0.1604 -0.2701 -2.9825 30 1 -0.3633 0.5138 -0.8899 31 1 -0.3633 -1.0276 0.0005 32 1 -0.3632 0.5138 0.8901 33 1 3.0487 -0.6929 1.1991 34 1 1.5954 -0.1787 2.0893 35 1 1.5954 -1.7202 1.1994 36 1 1.5240 -1.6911 -1.2454 37 1 3.0449 -0.7707 -1.1559 38 1 2.3430 -1.5452 -3.7002 39 1 2.9469 0.1033 -4.1657 40 1 1.2550 1.8911 -4.6241 41 1 -1.5978 1.5886 -8.7788 42 1 -1.9405 4.5623 -8.9002 43 1 1.0131 7.7936 -7.0087 44 1 0.2579 9.8735 -8.5461 45 1 -2.2596 10.1122 -9.9860 46 1 -0.4510 8.9256 -11.9225 47 1 -4.1086 7.7383 -10.2069 48 1 -3.8710 9.0041 -12.2706 49 1 1.1345 5.8519 -6.1991 50 1 1.2553 3.6088 -5.2461 51 1 -0.6006 0.4816 -2.7731 52 1 -0.1563 -1.2794 -2.7196 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_12807986.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:49 Heat of formation + Delta-G solvation = 74.341495 kcal Electronic energy + Delta-G solvation = -33464.641401 eV Core-core repulsion = 28903.472965 eV Total energy + Delta-G solvation = -4561.168435 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.185 amu Computer time = 1.13 seconds Orbital eigenvalues (eV) -43.78080 -42.30283 -41.52794 -40.16086 -38.80230 -38.11748 -37.85498 -34.81531 -34.21690 -33.22127 -31.35500 -30.66559 -29.92640 -29.48753 -27.18504 -26.67715 -25.85718 -24.64683 -24.10940 -23.69204 -22.55841 -22.15208 -21.42161 -20.63616 -19.71570 -19.11088 -18.82244 -18.56431 -17.84485 -17.73167 -17.48659 -17.34615 -17.14819 -16.67684 -16.37632 -16.18383 -16.05616 -15.78543 -15.55443 -15.39178 -14.92680 -14.70180 -14.44427 -14.34075 -14.02911 -14.01091 -13.91320 -13.75021 -13.62904 -13.59268 -13.53726 -13.46474 -13.28090 -13.04490 -12.86773 -12.75747 -12.71172 -12.31840 -12.12703 -11.93861 -11.64933 -11.33715 -11.16398 -10.98860 -10.77485 -10.62340 -10.12605 -9.97910 -9.04855 -5.11289 -0.82596 0.11851 0.60791 1.05481 1.08623 1.35860 1.42756 1.69543 1.83773 1.88529 1.97924 2.60886 2.89576 2.98095 2.99516 3.22817 3.25538 3.37034 3.37855 3.48481 3.57901 3.62229 3.76866 3.82454 3.83326 3.95703 3.98719 4.04852 4.17674 4.20871 4.22449 4.26996 4.35553 4.37723 4.42569 4.54051 4.60471 4.65689 4.71520 4.74013 4.75490 4.79361 4.80876 4.85352 4.88431 4.89922 4.96761 5.01798 5.05086 5.08895 5.16058 5.20006 5.39564 5.50715 5.55491 5.93427 6.43522 6.55883 6.65615 7.15862 Molecular weight = 374.18amu Principal moments of inertia in cm(-1) A = 0.017148 B = 0.001700 C = 0.001612 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1632.445688 B =16462.569849 C =17361.209274 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.368 5.368 3 H 0.439 0.561 4 C -0.046 4.046 5 C 0.008 3.992 6 C -0.116 4.116 7 H 0.135 0.865 8 C -0.125 4.125 9 C 0.091 3.909 10 H 0.067 0.933 11 N -0.693 5.693 12 C 0.559 3.441 13 O -0.564 6.564 14 C -0.180 4.180 15 C 0.157 3.843 16 O -0.498 6.498 17 C -0.159 4.159 18 C 0.025 3.975 19 C 0.002 3.998 20 C -0.170 4.170 21 C -0.186 4.186 22 C -0.053 4.053 23 C -0.024 4.024 24 O -0.541 6.541 25 Si 0.769 3.231 26 O -0.176 6.176 27 C -0.111 4.111 28 C -0.044 4.044 29 C -0.154 4.154 30 H 0.116 0.884 31 H 0.118 0.882 32 H 0.126 0.874 33 H 0.129 0.871 34 H 0.124 0.876 35 H 0.116 0.884 36 H 0.133 0.867 37 H 0.151 0.849 38 H 0.110 0.890 39 H 0.088 0.912 40 H 0.417 0.583 41 H 0.408 0.592 42 H 0.131 0.869 43 H 0.186 0.814 44 H 0.163 0.837 45 H 0.137 0.863 46 H 0.399 0.601 47 H -0.296 1.296 48 H -0.282 1.282 49 H 0.170 0.830 50 H 0.184 0.816 51 H 0.077 0.923 52 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 16.312 -17.436 32.886 40.640 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.188 4.188 5 C -0.114 4.114 6 C -0.135 4.135 7 H 0.152 0.848 8 C -0.164 4.164 9 C -0.015 4.015 10 H 0.086 0.914 11 N -0.347 5.347 12 C 0.347 3.653 13 O -0.443 6.443 14 C -0.184 4.184 15 C 0.110 3.890 16 O -0.311 6.311 17 C -0.177 4.177 18 C 0.024 3.976 19 C -0.047 4.047 20 C -0.189 4.189 21 C -0.205 4.205 22 C -0.104 4.104 23 C -0.135 4.135 24 O -0.349 6.349 25 Si 0.674 3.326 26 O -0.074 6.074 27 C -0.129 4.129 28 C -0.063 4.063 29 C -0.192 4.192 30 H 0.134 0.866 31 H 0.136 0.864 32 H 0.145 0.855 33 H 0.147 0.853 34 H 0.142 0.858 35 H 0.134 0.866 36 H 0.152 0.848 37 H 0.169 0.831 38 H 0.129 0.871 39 H 0.107 0.893 40 H 0.256 0.744 41 H 0.268 0.732 42 H 0.149 0.851 43 H 0.204 0.796 44 H 0.181 0.819 45 H 0.154 0.846 46 H 0.250 0.750 47 H -0.223 1.223 48 H -0.209 1.209 49 H 0.188 0.812 50 H 0.201 0.799 51 H 0.096 0.904 52 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 14.092 -17.852 32.912 40.006 hybrid contribution 0.056 0.941 -0.613 1.125 sum 14.148 -16.911 32.299 39.107 Atomic orbital electron populations 1.24261 0.76920 1.09453 1.09347 1.44814 1.15386 1.19566 1.14664 0.72325 1.24123 1.05860 1.02238 0.86610 1.23936 1.06159 0.99360 0.81953 1.23006 0.95390 1.02235 0.92851 0.84753 1.23269 0.95284 1.03842 0.93971 1.22032 0.99868 0.83946 0.95622 0.91425 1.45344 1.40085 1.12826 1.36417 1.18133 0.80038 0.87198 0.79901 1.90864 1.43678 1.47948 1.61842 1.20537 1.00907 0.95283 1.01678 1.18558 0.89012 0.88105 0.93278 1.84732 1.43121 1.47753 1.55530 1.21611 1.01198 0.92670 1.02270 1.17997 0.96548 0.87338 0.95699 1.20710 0.95672 0.95074 0.93278 1.22236 1.02747 0.90719 1.03154 1.21854 0.99295 1.01788 0.97527 1.23164 1.02342 0.82005 1.02842 1.24378 0.98780 1.01470 0.88898 1.86548 1.59786 1.37912 1.50643 0.93442 0.76505 0.82836 0.79818 1.83926 1.52404 1.25394 1.45654 1.21109 0.98165 0.98778 0.94849 1.21177 0.96142 0.90341 0.98593 1.23799 0.97110 1.03979 0.94346 0.86590 0.86362 0.85521 0.85297 0.85771 0.86563 0.84839 0.83077 0.87126 0.89325 0.74392 0.73152 0.85079 0.79648 0.81908 0.84581 0.74993 1.22263 1.20859 0.81242 0.79861 0.90395 0.87395 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.56 8.57 127.69 1.09 4.65 16 2 N -0.37 24.65 0.66 -948.85 -0.62 24.02 16 3 H 0.44 -31.39 8.41 -89.69 -0.75 -32.14 16 4 C -0.05 3.01 9.19 127.69 1.17 4.18 16 5 C 0.01 -0.49 4.57 86.30 0.39 -0.10 16 6 C -0.12 6.39 3.18 -10.26 -0.03 6.36 16 7 H 0.13 -7.96 8.09 -2.39 -0.02 -7.98 16 8 C -0.13 5.65 7.39 31.12 0.23 5.88 16 9 C 0.09 -3.19 4.32 45.52 0.20 -2.99 16 10 H 0.07 -1.71 7.46 -2.38 -0.02 -1.73 16 11 N -0.69 22.32 5.21 -443.43 -2.31 20.01 16 12 C 0.56 -10.95 7.75 86.62 0.67 -10.28 16 13 O -0.56 5.02 14.74 16.88 0.25 5.27 16 14 C -0.18 3.55 5.89 -19.97 -0.12 3.44 16 15 C 0.16 -2.07 6.71 22.81 0.15 -1.92 16 16 O -0.50 4.78 11.56 -68.98 -0.80 3.99 16 17 C -0.16 2.09 9.65 22.61 0.22 2.31 16 18 C 0.02 -0.41 5.87 -20.08 -0.12 -0.52 16 19 C 0.00 -0.03 7.02 24.24 0.17 0.14 16 20 C -0.17 2.72 10.26 22.40 0.23 2.95 16 21 C -0.19 2.36 10.78 22.11 0.24 2.60 16 22 C -0.05 0.59 6.21 24.90 0.15 0.74 16 23 C -0.02 0.29 2.98 71.24 0.21 0.51 16 24 O -0.54 6.46 12.88 -148.98 -1.92 4.55 16 25 Si 0.77 -8.52 32.11 68.60 2.20 -6.31 16 26 O -0.18 1.76 8.79 -5.92 -0.05 1.70 16 27 C -0.11 2.74 9.48 22.26 0.21 2.95 16 28 C -0.04 1.24 9.47 22.24 0.21 1.45 16 29 C -0.15 6.92 5.69 31.12 0.18 7.10 16 30 H 0.12 -6.88 5.13 -2.39 -0.01 -6.89 16 31 H 0.12 -7.16 8.11 -2.39 -0.02 -7.18 16 32 H 0.13 -7.86 8.14 -2.38 -0.02 -7.88 16 33 H 0.13 -8.39 8.11 -2.39 -0.02 -8.41 16 34 H 0.12 -7.93 8.14 -2.39 -0.02 -7.95 16 35 H 0.12 -7.30 8.14 -2.39 -0.02 -7.32 16 36 H 0.13 -8.28 7.79 -2.39 -0.02 -8.30 16 37 H 0.15 -9.84 8.09 -2.38 -0.02 -9.86 16 38 H 0.11 -5.01 8.10 -2.39 -0.02 -5.03 16 39 H 0.09 -3.90 8.14 -2.39 -0.02 -3.92 16 40 H 0.42 -16.87 6.71 -92.71 -0.62 -17.49 16 41 H 0.41 -6.59 9.06 -74.06 -0.67 -7.26 16 42 H 0.13 -1.51 7.90 -2.91 -0.02 -1.53 16 43 H 0.19 -4.34 7.24 -2.91 -0.02 -4.36 16 44 H 0.16 -2.39 8.06 -2.91 -0.02 -2.41 16 45 H 0.14 -1.74 7.96 -2.39 -0.02 -1.76 16 46 H 0.40 -7.85 8.70 -74.06 -0.64 -8.49 16 47 H -0.30 1.22 7.11 99.48 0.71 1.93 16 48 H -0.28 1.38 7.11 99.48 0.71 2.08 16 49 H 0.17 -5.22 6.95 -2.91 -0.02 -5.24 16 50 H 0.18 -7.20 6.38 -2.91 -0.02 -7.22 16 51 H 0.08 -3.33 7.18 -2.39 -0.02 -3.35 16 52 H 0.11 -4.94 7.90 -2.39 -0.02 -4.96 16 Total: 1.00 -92.52 421.04 0.56 -91.96 By element: Atomic # 1 Polarization: -172.97 SS G_CDS: -1.66 Total: -174.64 kcal Atomic # 6 Polarization: 23.99 SS G_CDS: 5.47 Total: 29.45 kcal Atomic # 7 Polarization: 46.96 SS G_CDS: -2.93 Total: 44.03 kcal Atomic # 8 Polarization: 18.02 SS G_CDS: -2.52 Total: 15.50 kcal Atomic # 14 Polarization: -8.52 SS G_CDS: 2.20 Total: -6.31 kcal Total: -92.52 0.56 -91.96 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12807986.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 166.303 kcal (2) G-P(sol) polarization free energy of solvation -92.517 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 73.786 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.555 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -91.962 kcal (6) G-S(sol) free energy of system = (1) + (5) 74.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.13 seconds