Wall clock time and date at job start Sun Mar 7 2021 06:30:55 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50704 * 1 3 3 C 1.39287 * 121.02863 * 2 1 4 4 C 1.46497 * 134.20337 * 359.94379 * 3 2 1 5 5 C 1.50703 * 126.59638 * 0.26101 * 4 3 2 6 6 O 1.42901 * 109.46913 * 284.99995 * 5 4 3 7 7 Si 1.86300 * 109.46881 * 165.00205 * 5 4 3 8 8 C 1.34183 * 106.80157 * 180.28408 * 4 3 2 9 9 N 1.36950 * 109.95053 * 359.97438 * 8 4 3 10 10 C 1.37153 * 110.11625 * 0.02562 * 9 8 4 11 11 N 1.32815 * 132.96795 * 179.97438 * 10 9 8 12 12 C 1.31306 * 121.89391 * 180.02562 * 11 10 9 13 13 C 1.39747 * 121.02902 * 179.77644 * 2 1 3 14 14 C 1.47661 * 120.45739 * 359.97438 * 13 2 1 15 15 O 1.21578 * 119.99727 * 353.71005 * 14 13 2 16 16 N 1.34777 * 120.00056 * 173.70529 * 14 13 2 17 17 C 1.46502 * 119.99845 * 180.02562 * 16 14 13 18 18 H 1.09001 * 112.85076 * 23.80857 * 17 16 14 19 19 C 1.53782 * 113.61102 * 155.00155 * 17 16 14 20 20 C 1.53776 * 87.08187 * 89.20006 * 19 17 16 21 21 H 1.08997 * 113.61946 * 270.88424 * 20 19 17 22 22 C 1.52998 * 113.61389 * 139.97859 * 20 19 17 23 23 N 1.46905 * 109.47177 * 175.00324 * 22 20 19 24 24 H 1.00900 * 109.47281 * 54.99520 * 23 22 20 25 25 C 1.46899 * 109.47116 * 175.00332 * 23 22 20 26 26 C 1.46897 * 109.46875 * 295.00012 * 23 22 20 27 27 C 1.53779 * 113.69131 * 252.53679 * 17 16 14 28 28 H 1.09003 * 109.46888 * 263.92508 * 1 2 3 29 29 H 1.08996 * 109.46870 * 23.92461 * 1 2 3 30 30 H 1.08993 * 109.47047 * 143.92876 * 1 2 3 31 31 H 1.08994 * 109.47066 * 45.00155 * 5 4 3 32 32 H 0.96696 * 113.99416 * 179.97438 * 6 5 4 33 33 H 1.48500 * 110.00107 * 59.99891 * 7 5 4 34 34 H 1.48501 * 109.99981 * 181.31979 * 7 5 4 35 35 H 1.07998 * 125.01789 * 179.97438 * 8 4 3 36 36 H 0.97001 * 124.93820 * 180.02562 * 9 8 4 37 37 H 1.07997 * 119.31279 * 180.02562 * 12 11 10 38 38 H 0.97000 * 120.00170 * 0.02562 * 16 14 13 39 39 H 1.09001 * 113.61294 * 203.75105 * 19 17 16 40 40 H 1.08997 * 113.61476 * 334.64951 * 19 17 16 41 41 H 1.09003 * 109.47261 * 295.00188 * 22 20 19 42 42 H 1.09002 * 109.47129 * 55.00060 * 22 20 19 43 43 H 1.09000 * 109.47317 * 59.99572 * 25 23 22 44 44 H 1.09003 * 109.46748 * 179.97438 * 25 23 22 45 45 H 1.08998 * 109.46946 * 299.99470 * 25 23 22 46 46 H 1.09010 * 109.47055 * 300.00000 * 26 23 22 47 47 H 1.09000 * 109.47526 * 59.99711 * 26 23 22 48 48 H 1.09001 * 109.47354 * 180.02562 * 26 23 22 49 49 H 1.09000 * 113.61181 * 25.42110 * 27 17 16 50 50 H 1.09000 * 113.61312 * 156.24121 * 27 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1936 0.0000 4 6 1.8516 2.6101 -0.0010 5 6 0.4526 3.1705 0.0030 6 8 -0.1238 3.0217 -1.2961 7 14 0.5087 4.9771 0.4544 8 6 2.9948 3.3126 -0.0068 9 7 4.0669 2.4605 -0.0089 10 6 3.6348 1.1588 -0.0051 11 7 4.2720 -0.0066 -0.0056 12 6 3.6266 -1.1501 -0.0018 13 6 2.2274 -1.1975 0.0047 14 6 1.5225 -2.4950 0.0103 15 8 0.3128 -2.5290 0.1263 16 7 2.2202 -3.6415 -0.1132 17 6 1.5208 -4.9287 -0.1082 18 1 0.4770 -4.8445 -0.4108 19 6 2.2847 -6.0477 -0.8357 20 6 2.9625 -6.3527 0.5105 21 1 3.8776 -5.7846 0.6773 22 6 3.1310 -7.8480 0.7869 23 7 3.8902 -8.0335 2.0309 24 1 3.4348 -7.5346 2.7804 25 6 3.9494 -9.4640 2.3597 26 6 5.2532 -7.5148 1.8546 27 6 1.7242 -5.7375 1.1839 28 1 -0.3633 -0.1088 1.0219 29 1 -0.3633 0.9393 -0.4167 30 1 -0.3633 -0.8306 -0.6050 31 1 -0.1522 2.6323 0.7327 32 1 -1.0264 3.3613 -1.3670 33 1 1.3305 5.7221 -0.5330 34 1 -0.8674 5.5339 0.4930 35 1 3.0598 4.3907 -0.0094 36 1 4.9966 2.7373 -0.0126 37 1 4.1869 -2.0734 -0.0019 38 1 3.1854 -3.6144 -0.2054 39 1 1.6431 -6.8528 -1.1939 40 1 2.9727 -5.6823 -1.5981 41 1 2.1497 -8.3118 0.8876 42 1 3.6691 -8.3119 -0.0398 43 1 4.4413 -10.0029 1.5499 44 1 4.5131 -9.6016 3.2824 45 1 2.9380 -9.8489 2.4905 46 1 5.7452 -8.0538 1.0448 47 1 5.2093 -6.4534 1.6105 48 1 5.8167 -7.6528 2.7774 49 1 1.9599 -5.1217 2.0518 50 1 0.9288 -6.4568 1.3785 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_12890568.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:30:55 Heat of formation + Delta-G solvation = 170.233380 kcal Electronic energy + Delta-G solvation = -30670.367998 eV Core-core repulsion = 26592.558830 eV Total energy + Delta-G solvation = -4077.809167 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 346.192 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.49645 -43.57813 -42.33278 -40.77992 -39.37388 -38.49750 -36.11760 -35.52986 -32.84465 -32.54934 -31.93353 -31.40863 -29.54270 -28.68649 -28.09233 -27.19833 -26.07346 -25.31971 -24.62418 -23.08534 -22.09863 -21.70288 -21.10726 -20.24516 -20.02164 -19.66234 -19.46106 -19.11899 -18.55776 -18.27454 -17.68383 -17.49981 -17.20607 -17.05051 -16.55134 -16.46091 -16.22765 -16.18049 -16.05546 -15.96698 -15.75740 -15.70649 -15.54485 -15.43098 -15.19684 -14.84503 -14.74309 -14.50746 -14.39850 -14.25042 -14.00223 -13.97003 -13.60492 -13.32375 -13.31261 -13.04262 -12.58432 -11.90989 -11.79649 -11.33604 -11.21136 -10.95861 -10.36199 -9.84414 -5.56905 -1.46511 -1.04444 -0.81365 0.49510 0.53741 0.63652 0.69543 0.72788 0.84198 0.89902 0.95151 1.00986 1.31931 1.36499 1.36891 1.62285 1.68189 1.75927 1.79860 1.90651 1.99938 2.10066 2.17712 2.24114 2.25268 2.30810 2.40824 2.46118 2.64155 2.78341 2.85165 2.92451 3.00652 3.03146 3.06410 3.16026 3.28982 3.35373 3.39990 3.41413 3.51839 3.62736 3.77546 3.85719 4.03824 4.16014 4.21411 4.34674 4.49481 4.65418 4.76295 5.03357 5.31807 5.40109 5.85571 6.07423 6.19776 Molecular weight = 346.19amu Principal moments of inertia in cm(-1) A = 0.021528 B = 0.002343 C = 0.002196 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1300.296603 B =11946.644557 C =12747.861039 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.133 4.133 2 C 0.091 3.909 3 C -0.147 4.147 4 C -0.132 4.132 5 C -0.044 4.044 6 O -0.535 6.535 7 Si 0.680 3.320 8 C 0.077 3.923 9 N -0.567 5.567 10 C 0.311 3.689 11 N -0.502 5.502 12 C 0.177 3.823 13 C -0.243 4.243 14 C 0.579 3.421 15 O -0.520 6.520 16 N -0.720 5.720 17 C 0.128 3.872 18 H 0.116 0.884 19 C -0.131 4.131 20 C -0.152 4.152 21 H 0.113 0.887 22 C 0.000 4.000 23 N -0.387 5.387 24 H 0.427 0.573 25 C -0.048 4.048 26 C -0.052 4.052 27 C -0.158 4.158 28 H 0.083 0.917 29 H 0.081 0.919 30 H 0.097 0.903 31 H 0.078 0.922 32 H 0.381 0.619 33 H -0.251 1.251 34 H -0.256 1.256 35 H 0.187 0.813 36 H 0.428 0.572 37 H 0.156 0.844 38 H 0.398 0.602 39 H 0.108 0.892 40 H 0.090 0.910 41 H 0.133 0.867 42 H 0.131 0.869 43 H 0.122 0.878 44 H 0.124 0.876 45 H 0.123 0.877 46 H 0.123 0.877 47 H 0.123 0.877 48 H 0.124 0.876 49 H 0.084 0.916 50 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.856 -28.524 9.374 31.601 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 C 0.083 3.917 3 C -0.154 4.154 4 C -0.139 4.139 5 C -0.154 4.154 6 O -0.342 6.342 7 Si 0.580 3.420 8 C -0.050 4.050 9 N -0.172 5.172 10 C 0.077 3.923 11 N -0.214 5.214 12 C 0.008 3.992 13 C -0.251 4.251 14 C 0.368 3.632 15 O -0.396 6.396 16 N -0.372 5.372 17 C 0.022 3.978 18 H 0.134 0.866 19 C -0.170 4.170 20 C -0.170 4.170 21 H 0.131 0.869 22 C -0.121 4.121 23 N 0.037 4.963 24 H 0.262 0.738 25 C -0.190 4.190 26 C -0.194 4.194 27 C -0.197 4.197 28 H 0.102 0.898 29 H 0.099 0.901 30 H 0.115 0.885 31 H 0.096 0.904 32 H 0.229 0.771 33 H -0.175 1.175 34 H -0.180 1.180 35 H 0.204 0.796 36 H 0.267 0.733 37 H 0.173 0.827 38 H 0.234 0.766 39 H 0.126 0.874 40 H 0.108 0.892 41 H 0.151 0.849 42 H 0.149 0.851 43 H 0.141 0.859 44 H 0.143 0.857 45 H 0.142 0.858 46 H 0.141 0.859 47 H 0.141 0.859 48 H 0.143 0.857 49 H 0.103 0.897 50 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 10.519 -27.936 8.869 31.141 hybrid contribution -0.700 -0.055 -0.605 0.927 sum 9.820 -27.991 8.264 30.793 Atomic orbital electron populations 1.21255 0.88868 1.04914 1.03815 1.19896 0.97118 0.89171 0.85557 1.19497 0.92829 0.93635 1.09448 1.19464 0.93316 0.90416 1.10692 1.24092 0.91862 1.11468 0.87993 1.86623 1.33815 1.83754 1.30025 0.95207 0.83914 0.73818 0.89060 1.21834 0.84886 0.96181 1.02073 1.41553 1.09815 1.02637 1.63180 1.18444 0.89261 0.85880 0.98668 1.66384 1.40562 0.96049 1.18437 1.22319 0.89805 0.94349 0.92768 1.20256 0.94710 0.93284 1.16850 1.17925 0.86755 0.83153 0.75377 1.90800 1.13565 1.86855 1.48360 1.45541 1.10401 1.04830 1.76468 1.21635 0.99057 0.82182 0.94970 0.86631 1.23343 0.99682 0.99150 0.94785 1.23352 1.00804 0.91381 1.01498 0.86950 1.24132 1.00632 1.01464 0.85897 1.45034 1.16603 1.16782 1.17837 0.73785 1.24144 1.09553 0.77491 1.07767 1.24185 0.80510 1.05431 1.09280 1.23740 0.96247 1.00304 0.99402 0.89816 0.90060 0.88481 0.90444 0.77069 1.17545 1.17989 0.79612 0.73292 0.82660 0.76599 0.87379 0.89153 0.84906 0.85058 0.85946 0.85726 0.85810 0.85864 0.85878 0.85711 0.89714 0.87910 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 0.89 8.45 36.01 0.30 1.19 16 2 C 0.09 -0.59 5.98 -103.67 -0.62 -1.21 16 3 C -0.15 0.86 6.16 -105.13 -0.65 0.22 16 4 C -0.13 0.90 5.61 -102.72 -0.58 0.32 16 5 C -0.04 0.35 1.87 36.01 0.07 0.41 16 6 O -0.53 3.44 11.62 -35.23 -0.41 3.03 16 7 Si 0.68 -5.88 30.80 -169.99 -5.24 -11.12 16 8 C 0.08 -0.65 10.44 -16.69 -0.17 -0.82 16 9 N -0.57 4.78 6.04 -12.12 -0.07 4.70 16 10 C 0.31 -1.99 8.42 -155.72 -1.31 -3.30 16 11 N -0.50 3.66 10.37 -11.96 -0.12 3.54 16 12 C 0.18 -1.83 10.67 -17.11 -0.18 -2.01 16 13 C -0.24 2.18 5.89 -104.82 -0.62 1.56 16 14 C 0.58 -6.07 7.72 -12.41 -0.10 -6.17 16 15 O -0.52 3.63 13.10 5.30 0.07 3.70 16 16 N -0.72 11.50 5.22 -54.02 -0.28 11.22 16 17 C 0.13 -2.32 4.32 -67.12 -0.29 -2.61 16 18 H 0.12 -1.72 7.46 -51.93 -0.39 -2.10 16 19 C -0.13 2.90 7.39 -25.92 -0.19 2.71 16 20 C -0.15 4.03 3.45 -89.81 -0.31 3.71 16 21 H 0.11 -3.12 6.10 -51.93 -0.32 -3.43 16 22 C 0.00 0.00 4.48 -3.82 -0.02 -0.02 16 23 N -0.39 12.65 0.66 -251.25 -0.17 12.48 16 24 H 0.43 -14.44 8.44 -39.29 -0.33 -14.77 16 25 C -0.05 1.52 9.19 60.06 0.55 2.07 16 26 C -0.05 1.64 8.97 60.06 0.54 2.18 16 27 C -0.16 3.58 7.43 -25.92 -0.19 3.38 16 28 H 0.08 -0.60 8.14 -51.93 -0.42 -1.02 16 29 H 0.08 -0.52 4.80 -51.93 -0.25 -0.77 16 30 H 0.10 -0.55 5.97 -51.93 -0.31 -0.86 16 31 H 0.08 -0.70 7.15 -51.93 -0.37 -1.07 16 32 H 0.38 -3.82 8.74 45.56 0.40 -3.42 16 33 H -0.25 1.53 7.04 56.52 0.40 1.93 16 34 H -0.26 1.51 7.11 56.52 0.40 1.91 16 35 H 0.19 -2.06 6.31 -52.49 -0.33 -2.40 16 36 H 0.43 -4.69 8.96 -40.82 -0.37 -5.05 16 37 H 0.16 -2.39 6.43 -52.49 -0.34 -2.73 16 38 H 0.40 -7.50 6.78 -40.82 -0.28 -7.78 16 39 H 0.11 -2.42 8.10 -51.93 -0.42 -2.85 16 40 H 0.09 -1.90 8.14 -51.93 -0.42 -2.32 16 41 H 0.13 -4.06 7.79 -51.93 -0.40 -4.46 16 42 H 0.13 -4.01 8.09 -51.93 -0.42 -4.43 16 43 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 44 H 0.12 -3.93 8.14 -51.93 -0.42 -4.35 16 45 H 0.12 -3.89 8.11 -51.93 -0.42 -4.32 16 46 H 0.12 -3.84 8.11 -51.92 -0.42 -4.26 16 47 H 0.12 -3.84 6.10 -51.93 -0.32 -4.15 16 48 H 0.12 -3.92 8.14 -51.93 -0.42 -4.34 16 49 H 0.08 -1.81 8.14 -51.93 -0.42 -2.23 16 50 H 0.10 -2.39 7.90 -51.93 -0.41 -2.80 16 LS Contribution 388.59 15.07 5.86 5.86 Total: 1.00 -39.75 388.59 -11.56 -51.30 By element: Atomic # 1 Polarization: -78.91 SS G_CDS: -7.43 Total: -86.34 kcal Atomic # 6 Polarization: 5.38 SS G_CDS: -3.76 Total: 1.62 kcal Atomic # 7 Polarization: 32.59 SS G_CDS: -0.64 Total: 31.95 kcal Atomic # 8 Polarization: 7.07 SS G_CDS: -0.34 Total: 6.73 kcal Atomic # 14 Polarization: -5.88 SS G_CDS: -5.24 Total: -11.12 kcal Total LS contribution 5.86 Total: 5.86 kcal Total: -39.75 -11.56 -51.30 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_12890568.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 221.538 kcal (2) G-P(sol) polarization free energy of solvation -39.746 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 181.792 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.558 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -51.305 kcal (6) G-S(sol) free energy of system = (1) + (5) 170.233 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds