Wall clock time and date at job start Sun Mar 7 2021 06:31:05 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00907 * 109.47214 * 2 1 4 4 C 1.46903 * 109.47165 * 119.99402 * 2 1 3 5 5 C 1.46900 * 109.47668 * 239.99714 * 2 1 3 6 6 C 1.53000 * 109.46802 * 64.99560 * 5 2 1 7 7 H 1.09000 * 112.90915 * 43.75552 * 6 5 2 8 8 C 1.53787 * 113.60890 * 175.00447 * 6 5 2 9 9 C 1.53784 * 87.07923 * 139.98364 * 8 6 5 10 10 H 1.09004 * 113.61162 * 220.01809 * 9 8 6 11 11 N 1.46499 * 113.61434 * 89.11404 * 9 8 6 12 12 C 1.34778 * 119.99940 * 155.00095 * 11 9 8 13 13 O 1.21648 * 119.99934 * 359.97438 * 12 11 9 14 14 C 1.47054 * 120.00101 * 180.02562 * 12 11 9 15 15 C 1.35868 * 125.42744 * 179.69132 * 14 12 11 16 16 C 1.41596 * 107.72703 * 179.88008 * 15 14 12 17 17 C 1.40059 * 133.38115 * 180.08417 * 16 15 14 18 18 C 1.36468 * 119.83262 * 180.32882 * 17 16 15 19 19 C 1.38897 * 120.61711 * 359.97438 * 18 17 16 20 20 C 1.50698 * 119.68273 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.47309 * 119.99864 * 20 19 18 22 22 Si 1.86303 * 109.46728 * 0.02562 * 20 19 18 23 23 C 1.37713 * 120.64511 * 359.97438 * 19 18 17 24 24 C 1.39182 * 119.81042 * 0.03419 * 23 19 18 25 25 N 1.37494 * 133.18717 * 179.97438 * 24 23 19 26 26 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 27 27 H 1.09000 * 109.47362 * 300.00532 * 1 2 3 28 28 H 1.08999 * 109.47045 * 60.00452 * 1 2 3 29 29 H 1.08994 * 109.46903 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47198 * 180.02562 * 4 2 1 31 31 H 1.09000 * 109.47034 * 300.00267 * 4 2 1 32 32 H 1.08992 * 109.47164 * 59.99919 * 4 2 1 33 33 H 1.09003 * 109.46426 * 304.99961 * 5 2 1 34 34 H 1.08993 * 109.47679 * 185.00053 * 5 2 1 35 35 H 1.09004 * 113.61202 * 254.53117 * 8 6 5 36 36 H 1.08994 * 113.61447 * 25.43549 * 8 6 5 37 37 H 0.97000 * 120.00274 * 334.99936 * 11 9 8 38 38 H 1.07995 * 126.13308 * 0.02562 * 15 14 12 39 39 H 1.08008 * 120.08472 * 0.30428 * 17 16 15 40 40 H 1.08002 * 119.69466 * 180.02562 * 18 17 16 41 41 H 1.08995 * 109.47341 * 240.00357 * 20 19 18 42 42 H 0.96698 * 113.99760 * 180.02562 * 21 20 19 43 43 H 1.48497 * 110.00114 * 59.99867 * 22 20 19 44 44 H 1.48498 * 110.00009 * 181.31836 * 22 20 19 45 45 H 1.07998 * 120.09716 * 179.97438 * 23 19 18 46 46 H 0.96993 * 125.60255 * 0.02562 * 25 24 23 47 47 H 1.09006 * 113.61307 * 270.88660 * 26 9 8 48 48 H 1.08999 * 113.69146 * 139.99146 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6924 1.1995 5 6 1.9588 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 1.7107 1.1708 -2.3369 8 6 2.1236 -0.4791 -3.7524 9 6 0.7624 -0.1615 -4.3936 10 1 0.4116 -0.9335 -5.0785 11 7 0.6821 1.1857 -4.9634 12 6 -0.1882 1.4455 -5.9592 13 8 -0.9068 0.5611 -6.3851 14 6 -0.2684 2.7977 -6.5316 15 6 -1.0979 3.1791 -7.5379 16 6 -0.8675 4.5534 -7.7890 17 6 -1.4175 5.4716 -8.6923 18 6 -0.9750 6.7626 -8.7020 19 6 0.0172 7.1769 -7.8228 20 6 0.4896 8.6077 -7.8513 21 8 0.2577 9.2114 -6.5770 22 14 -0.4468 9.5447 -9.1613 23 6 0.5728 6.2933 -6.9245 24 6 0.1384 4.9713 -6.8955 25 7 0.4905 3.8817 -6.1344 26 6 0.1608 -0.2703 -2.9825 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.0487 -0.6920 1.1998 31 1 1.5953 -0.1785 2.0895 32 1 1.5954 -1.7200 1.1997 33 1 1.5242 -1.6911 -1.2451 34 1 3.0450 -0.7707 -1.1557 35 1 2.9471 0.1041 -4.1645 36 1 2.3433 -1.5454 -3.6999 37 1 1.2553 1.8908 -4.6241 38 1 -1.8073 2.5478 -8.0521 39 1 -2.1895 5.1587 -9.3799 40 1 -1.4010 7.4689 -9.3993 41 1 1.5555 8.6340 -8.0773 42 1 0.5379 10.1353 -6.5227 43 1 -1.9015 9.5163 -8.8642 44 1 0.0320 10.9491 -9.2213 45 1 1.3441 6.6249 -6.2451 46 1 1.1619 3.8750 -5.4345 47 1 -0.1560 -1.2796 -2.7196 48 1 -0.6006 0.4807 -2.7719 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:05 Heat of formation + Delta-G solvation = 157.451897 kcal Electronic energy + Delta-G solvation = -27824.937361 eV Core-core repulsion = 23967.537477 eV Total energy + Delta-G solvation = -3857.399884 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -44.62829 -43.50749 -42.23555 -40.57410 -39.54708 -37.77392 -35.98615 -34.07154 -32.63162 -32.05259 -31.71909 -31.18021 -28.67901 -28.40170 -27.63837 -26.08389 -25.08081 -24.07256 -22.73296 -22.42712 -22.23782 -21.47270 -20.62298 -20.17963 -19.83172 -19.20059 -18.80736 -18.50288 -17.85522 -17.62906 -17.51408 -17.12540 -16.96926 -16.54663 -16.36062 -16.22024 -16.08597 -15.95434 -15.84549 -15.75253 -15.67629 -15.61219 -15.40466 -15.23256 -14.95419 -14.73159 -14.46534 -14.24668 -14.12699 -13.51036 -13.39984 -13.20243 -13.01507 -12.78072 -12.37398 -12.25642 -11.69636 -11.56109 -11.13512 -10.06208 -9.57019 -5.50020 -1.52265 -1.14166 -0.17941 0.14965 0.42553 0.47060 0.59020 0.65627 0.68117 0.95773 1.07097 1.20836 1.28397 1.30826 1.42093 1.53554 1.61268 1.71585 1.77686 1.87052 1.93080 2.03199 2.06781 2.11790 2.22721 2.25870 2.29083 2.55506 2.65261 2.85826 2.87192 2.88171 3.00545 3.12522 3.14791 3.21873 3.30763 3.39417 3.47561 3.58943 3.70179 3.73151 3.86455 4.00917 4.16250 4.25518 4.53085 4.68905 4.84055 4.86985 5.05718 5.27194 5.45170 5.77729 5.90023 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.017357 B = 0.002364 C = 0.002161 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1612.818886 B =11843.705046 C =12955.189948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.056 4.056 2 N -0.386 5.386 3 H 0.426 0.574 4 C -0.048 4.048 5 C 0.000 4.000 6 C -0.149 4.149 7 H 0.110 0.890 8 C -0.130 4.130 9 C 0.126 3.874 10 H 0.119 0.881 11 N -0.721 5.721 12 C 0.593 3.407 13 O -0.507 6.507 14 C -0.004 4.004 15 C -0.085 4.085 16 C -0.121 4.121 17 C -0.047 4.047 18 C -0.141 4.141 19 C -0.032 4.032 20 C -0.077 4.077 21 O -0.538 6.538 22 Si 0.685 3.315 23 C -0.108 4.108 24 C 0.120 3.880 25 N -0.582 5.582 26 C -0.159 4.159 27 H 0.123 0.877 28 H 0.125 0.875 29 H 0.123 0.877 30 H 0.123 0.877 31 H 0.124 0.876 32 H 0.122 0.878 33 H 0.133 0.867 34 H 0.133 0.867 35 H 0.090 0.910 36 H 0.110 0.890 37 H 0.396 0.604 38 H 0.160 0.840 39 H 0.136 0.864 40 H 0.133 0.867 41 H 0.079 0.921 42 H 0.382 0.618 43 H -0.253 1.253 44 H -0.260 1.260 45 H 0.125 0.875 46 H 0.413 0.587 47 H 0.106 0.894 48 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 9.371 -15.446 24.475 30.421 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.198 4.198 2 N 0.039 4.961 3 H 0.260 0.740 4 C -0.190 4.190 5 C -0.121 4.121 6 C -0.167 4.167 7 H 0.128 0.872 8 C -0.169 4.169 9 C 0.020 3.980 10 H 0.137 0.863 11 N -0.373 5.373 12 C 0.380 3.620 13 O -0.380 6.380 14 C -0.112 4.112 15 C -0.112 4.112 16 C -0.125 4.125 17 C -0.066 4.066 18 C -0.159 4.159 19 C -0.034 4.034 20 C -0.187 4.187 21 O -0.346 6.346 22 Si 0.586 3.414 23 C -0.129 4.129 24 C 0.011 3.989 25 N -0.188 5.188 26 C -0.197 4.197 27 H 0.142 0.858 28 H 0.144 0.856 29 H 0.142 0.858 30 H 0.142 0.858 31 H 0.143 0.857 32 H 0.141 0.859 33 H 0.151 0.849 34 H 0.151 0.849 35 H 0.108 0.892 36 H 0.129 0.871 37 H 0.230 0.770 38 H 0.178 0.822 39 H 0.154 0.846 40 H 0.150 0.850 41 H 0.097 0.903 42 H 0.231 0.769 43 H -0.177 1.177 44 H -0.185 1.185 45 H 0.143 0.857 46 H 0.250 0.750 47 H 0.124 0.876 48 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 8.049 -16.384 24.237 30.343 hybrid contribution 1.206 1.425 1.665 2.502 sum 9.255 -14.959 25.902 31.311 Atomic orbital electron populations 1.24322 0.75896 1.09831 1.09719 1.45087 1.16456 1.18880 1.15692 0.73962 1.24148 1.05641 1.02521 0.86686 1.24118 1.05133 0.99954 0.82902 1.23267 0.99863 1.00583 0.93026 0.87201 1.23339 0.97892 1.03489 0.92144 1.21705 0.95820 0.85843 0.94646 0.86314 1.45519 1.41721 1.11705 1.38319 1.17200 0.79807 0.86249 0.78699 1.90926 1.41894 1.45199 1.60001 1.19835 1.01019 0.87345 1.02973 1.21053 0.99565 0.93985 0.96567 1.18216 1.00077 0.94191 1.00012 1.20411 0.98124 0.91671 0.96365 1.20505 0.98254 0.96628 1.00516 1.19005 0.95705 0.93105 0.95580 1.24817 1.05114 0.95015 0.93741 1.86555 1.86674 1.30346 1.31030 0.94836 0.80230 0.80535 0.85807 1.19806 1.02798 0.89144 1.01153 1.18263 0.97682 0.88839 0.94150 1.41745 1.35773 1.07435 1.33803 1.23847 0.94852 1.03808 0.97211 0.85813 0.85628 0.85847 0.85821 0.85713 0.85917 0.84908 0.84909 0.89158 0.87129 0.76989 0.82231 0.84616 0.84956 0.90285 0.76936 1.17729 1.18503 0.85669 0.74970 0.87614 0.89623 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 1.74 8.57 60.06 0.51 2.25 16 2 N -0.39 12.74 0.66 -251.27 -0.17 12.57 16 3 H 0.43 -14.77 8.41 -39.29 -0.33 -15.10 16 4 C -0.05 1.54 9.19 60.07 0.55 2.09 16 5 C 0.00 -0.01 4.57 -3.82 -0.02 -0.03 16 6 C -0.15 4.03 3.18 -89.81 -0.29 3.74 16 7 H 0.11 -3.10 8.10 -51.93 -0.42 -3.52 16 8 C -0.13 2.97 7.39 -25.91 -0.19 2.78 16 9 C 0.13 -2.38 4.32 -67.12 -0.29 -2.67 16 10 H 0.12 -1.85 7.47 -51.93 -0.39 -2.24 16 11 N -0.72 12.10 5.26 -54.21 -0.29 11.82 16 12 C 0.59 -6.61 7.80 -12.69 -0.10 -6.71 16 13 O -0.51 3.50 16.44 5.23 0.09 3.58 16 14 C 0.00 0.04 6.97 -82.29 -0.57 -0.54 16 15 C -0.08 0.67 10.53 -39.15 -0.41 0.25 16 16 C -0.12 0.87 6.16 -106.93 -0.66 0.21 16 17 C -0.05 0.35 10.06 -39.54 -0.40 -0.04 16 18 C -0.14 1.04 8.59 -39.98 -0.34 0.69 16 19 C -0.03 0.23 5.43 -104.57 -0.57 -0.34 16 20 C -0.08 0.62 2.80 36.00 0.10 0.72 16 21 O -0.54 3.71 12.73 -35.23 -0.45 3.26 16 22 Si 0.69 -5.36 29.75 -169.99 -5.06 -10.41 16 23 C -0.11 0.86 9.61 -39.42 -0.38 0.48 16 24 C 0.12 -1.01 7.25 -83.97 -0.61 -1.62 16 25 N -0.58 6.83 6.07 -7.35 -0.04 6.78 16 26 C -0.16 3.71 5.69 -25.92 -0.15 3.56 16 27 H 0.12 -3.84 8.14 -51.93 -0.42 -4.27 16 28 H 0.13 -3.75 5.13 -51.93 -0.27 -4.02 16 29 H 0.12 -3.79 8.11 -51.93 -0.42 -4.21 16 30 H 0.12 -3.94 8.11 -51.93 -0.42 -4.36 16 31 H 0.12 -3.95 8.14 -51.93 -0.42 -4.38 16 32 H 0.12 -3.85 8.14 -51.93 -0.42 -4.28 16 33 H 0.13 -4.08 7.79 -51.93 -0.40 -4.49 16 34 H 0.13 -4.15 8.09 -51.93 -0.42 -4.57 16 35 H 0.09 -1.96 8.14 -51.93 -0.42 -2.38 16 36 H 0.11 -2.56 8.10 -51.93 -0.42 -2.98 16 37 H 0.40 -7.80 7.76 -40.82 -0.32 -8.12 16 38 H 0.16 -1.32 8.06 -52.49 -0.42 -1.75 16 39 H 0.14 -1.27 8.06 -52.48 -0.42 -1.69 16 40 H 0.13 -1.17 4.82 -52.49 -0.25 -1.42 16 41 H 0.08 -0.76 7.96 -51.93 -0.41 -1.18 16 42 H 0.38 -3.98 8.74 45.56 0.40 -3.58 16 43 H -0.25 1.15 7.11 56.52 0.40 1.56 16 44 H -0.26 1.39 7.11 56.52 0.40 1.79 16 45 H 0.13 -1.17 8.06 -52.49 -0.42 -1.59 16 46 H 0.41 -6.49 8.12 -40.82 -0.33 -6.82 16 47 H 0.11 -2.55 7.90 -51.93 -0.41 -2.96 16 48 H 0.09 -1.92 7.18 -51.93 -0.37 -2.29 16 LS Contribution 381.76 15.07 5.75 5.75 Total: 1.00 -39.32 381.76 -11.31 -50.64 By element: Atomic # 1 Polarization: -81.50 SS G_CDS: -7.35 Total: -88.85 kcal Atomic # 6 Polarization: 8.66 SS G_CDS: -3.80 Total: 4.85 kcal Atomic # 7 Polarization: 31.67 SS G_CDS: -0.49 Total: 31.17 kcal Atomic # 8 Polarization: 7.21 SS G_CDS: -0.36 Total: 6.84 kcal Atomic # 14 Polarization: -5.36 SS G_CDS: -5.06 Total: -10.41 kcal Total LS contribution 5.75 Total: 5.75 kcal Total: -39.32 -11.31 -50.64 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 208.088 kcal (2) G-P(sol) polarization free energy of solvation -39.321 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 168.767 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.315 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -50.636 kcal (6) G-S(sol) free energy of system = (1) + (5) 157.452 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.78 seconds