Wall clock time and date at job start Sun Mar 7 2021 06:31:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46899 * 1 3 3 H 1.00907 * 109.47214 * 2 1 4 4 C 1.46903 * 109.47165 * 119.99402 * 2 1 3 5 5 C 1.46900 * 109.47668 * 239.99714 * 2 1 3 6 6 C 1.53000 * 109.46802 * 64.99560 * 5 2 1 7 7 H 1.09000 * 112.90915 * 43.75552 * 6 5 2 8 8 C 1.53787 * 113.60890 * 175.00447 * 6 5 2 9 9 C 1.53784 * 87.07923 * 139.98364 * 8 6 5 10 10 H 1.09004 * 113.61162 * 220.01809 * 9 8 6 11 11 N 1.46499 * 113.61434 * 89.11404 * 9 8 6 12 12 C 1.34778 * 119.99940 * 155.00095 * 11 9 8 13 13 O 1.21648 * 119.99934 * 359.97438 * 12 11 9 14 14 C 1.47054 * 120.00101 * 180.02562 * 12 11 9 15 15 C 1.35868 * 125.42744 * 179.69132 * 14 12 11 16 16 C 1.41596 * 107.72703 * 179.88008 * 15 14 12 17 17 C 1.40059 * 133.38115 * 180.08417 * 16 15 14 18 18 C 1.36468 * 119.83262 * 180.32882 * 17 16 15 19 19 C 1.38897 * 120.61711 * 359.97438 * 18 17 16 20 20 C 1.50698 * 119.68273 * 180.02562 * 19 18 17 21 21 O 1.42904 * 109.47309 * 119.99864 * 20 19 18 22 22 Si 1.86303 * 109.46728 * 0.02562 * 20 19 18 23 23 C 1.37713 * 120.64511 * 359.97438 * 19 18 17 24 24 C 1.39182 * 119.81042 * 0.03419 * 23 19 18 25 25 N 1.37494 * 133.18717 * 179.97438 * 24 23 19 26 26 C 1.53779 * 87.08045 * 334.56667 * 9 8 6 27 27 H 1.09000 * 109.47362 * 300.00532 * 1 2 3 28 28 H 1.08999 * 109.47045 * 60.00452 * 1 2 3 29 29 H 1.08994 * 109.46903 * 180.02562 * 1 2 3 30 30 H 1.09000 * 109.47198 * 180.02562 * 4 2 1 31 31 H 1.09000 * 109.47034 * 300.00267 * 4 2 1 32 32 H 1.08992 * 109.47164 * 59.99919 * 4 2 1 33 33 H 1.09003 * 109.46426 * 304.99961 * 5 2 1 34 34 H 1.08993 * 109.47679 * 185.00053 * 5 2 1 35 35 H 1.09004 * 113.61202 * 254.53117 * 8 6 5 36 36 H 1.08994 * 113.61447 * 25.43549 * 8 6 5 37 37 H 0.97000 * 120.00274 * 334.99936 * 11 9 8 38 38 H 1.07995 * 126.13308 * 0.02562 * 15 14 12 39 39 H 1.08008 * 120.08472 * 0.30428 * 17 16 15 40 40 H 1.08002 * 119.69466 * 180.02562 * 18 17 16 41 41 H 1.08995 * 109.47341 * 240.00357 * 20 19 18 42 42 H 0.96698 * 113.99760 * 180.02562 * 21 20 19 43 43 H 1.48497 * 110.00114 * 59.99867 * 22 20 19 44 44 H 1.48498 * 110.00009 * 181.31836 * 22 20 19 45 45 H 1.07998 * 120.09716 * 179.97438 * 23 19 18 46 46 H 0.96993 * 125.60255 * 0.02562 * 25 24 23 47 47 H 1.09006 * 113.61307 * 270.88660 * 26 9 8 48 48 H 1.08999 * 113.69146 * 139.99146 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6924 1.1995 5 6 1.9588 -0.6925 -1.1994 6 6 1.5540 0.0976 -2.4455 7 1 1.7107 1.1708 -2.3369 8 6 2.1236 -0.4791 -3.7524 9 6 0.7624 -0.1615 -4.3936 10 1 0.4116 -0.9335 -5.0785 11 7 0.6821 1.1857 -4.9634 12 6 -0.1882 1.4455 -5.9592 13 8 -0.9068 0.5611 -6.3851 14 6 -0.2684 2.7977 -6.5316 15 6 -1.0979 3.1791 -7.5379 16 6 -0.8675 4.5534 -7.7890 17 6 -1.4175 5.4716 -8.6923 18 6 -0.9750 6.7626 -8.7020 19 6 0.0172 7.1769 -7.8228 20 6 0.4896 8.6077 -7.8513 21 8 0.2577 9.2114 -6.5770 22 14 -0.4468 9.5447 -9.1613 23 6 0.5728 6.2933 -6.9245 24 6 0.1384 4.9713 -6.8955 25 7 0.4905 3.8817 -6.1344 26 6 0.1608 -0.2703 -2.9825 27 1 -0.3634 0.5139 0.8899 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 0.0005 30 1 3.0487 -0.6920 1.1998 31 1 1.5953 -0.1785 2.0895 32 1 1.5954 -1.7200 1.1997 33 1 1.5242 -1.6911 -1.2451 34 1 3.0450 -0.7707 -1.1557 35 1 2.9471 0.1041 -4.1645 36 1 2.3433 -1.5454 -3.6999 37 1 1.2553 1.8908 -4.6241 38 1 -1.8073 2.5478 -8.0521 39 1 -2.1895 5.1587 -9.3799 40 1 -1.4010 7.4689 -9.3993 41 1 1.5555 8.6340 -8.0773 42 1 0.5379 10.1353 -6.5227 43 1 -1.9015 9.5163 -8.8642 44 1 0.0320 10.9491 -9.2213 45 1 1.3441 6.6249 -6.2451 46 1 1.1619 3.8750 -5.4345 47 1 -0.1560 -1.2796 -2.7196 48 1 -0.6006 0.4807 -2.7719 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13158378.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:04 Heat of formation + Delta-G solvation = 129.469323 kcal Electronic energy + Delta-G solvation = -27826.150777 eV Core-core repulsion = 23967.537477 eV Total energy + Delta-G solvation = -3858.613300 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -42.79217 -42.25445 -40.85689 -39.28193 -38.77448 -37.12481 -34.76833 -33.36190 -31.35661 -30.49141 -30.12322 -29.52796 -27.17761 -26.72852 -25.84734 -24.60691 -23.71854 -23.22606 -22.00304 -21.35575 -20.72594 -19.64919 -19.10392 -18.56083 -18.11314 -17.78718 -17.39245 -17.25927 -16.83706 -16.54639 -16.43715 -15.91664 -15.51831 -15.32827 -15.12142 -15.01112 -14.85943 -14.66883 -14.32126 -14.10307 -13.92830 -13.78932 -13.58306 -13.56112 -13.54106 -13.31656 -13.09236 -12.81006 -12.73425 -12.36012 -12.23119 -12.20729 -11.75446 -11.73717 -11.50566 -11.40548 -11.01716 -10.50940 -10.31763 -9.37427 -8.86165 -4.91582 -0.43053 0.47068 0.87763 1.01659 1.29615 1.59410 1.65185 1.88055 1.96431 2.09819 2.68683 2.85549 2.93928 3.17839 3.31078 3.35016 3.42717 3.50269 3.61757 3.71390 3.74459 3.82925 3.98844 4.00293 4.16199 4.17822 4.18862 4.26822 4.31366 4.38667 4.39917 4.42000 4.50023 4.57592 4.67235 4.69181 4.74692 4.75536 4.81430 4.84555 4.86645 4.88746 4.94763 4.98558 5.06696 5.23946 5.34713 5.43142 5.50196 5.52922 5.92172 6.18207 6.40688 6.56352 6.89589 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.017357 B = 0.002364 C = 0.002161 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1612.818886 B =11843.705046 C =12955.189948 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.058 4.058 2 N -0.368 5.368 3 H 0.438 0.562 4 C -0.046 4.046 5 C 0.008 3.992 6 C -0.119 4.119 7 H 0.130 0.870 8 C -0.125 4.125 9 C 0.089 3.911 10 H 0.075 0.925 11 N -0.693 5.693 12 C 0.591 3.409 13 O -0.559 6.559 14 C 0.013 3.987 15 C -0.123 4.123 16 C -0.137 4.137 17 C -0.063 4.063 18 C -0.151 4.151 19 C -0.053 4.053 20 C -0.073 4.073 21 O -0.556 6.556 22 Si 0.749 3.251 23 C -0.106 4.106 24 C 0.111 3.889 25 N -0.557 5.557 26 C -0.152 4.152 27 H 0.126 0.874 28 H 0.115 0.885 29 H 0.120 0.880 30 H 0.128 0.872 31 H 0.123 0.877 32 H 0.117 0.883 33 H 0.137 0.863 34 H 0.150 0.850 35 H 0.085 0.915 36 H 0.115 0.885 37 H 0.414 0.586 38 H 0.150 0.850 39 H 0.143 0.857 40 H 0.138 0.862 41 H 0.103 0.897 42 H 0.396 0.604 43 H -0.303 1.303 44 H -0.291 1.291 45 H 0.142 0.858 46 H 0.434 0.566 47 H 0.113 0.887 48 H 0.079 0.921 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.848 -15.775 27.460 33.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.200 4.200 2 N 0.055 4.945 3 H 0.276 0.724 4 C -0.188 4.188 5 C -0.114 4.114 6 C -0.137 4.137 7 H 0.148 0.852 8 C -0.164 4.164 9 C -0.016 4.016 10 H 0.093 0.907 11 N -0.345 5.345 12 C 0.377 3.623 13 O -0.437 6.437 14 C -0.097 4.097 15 C -0.151 4.151 16 C -0.142 4.142 17 C -0.082 4.082 18 C -0.169 4.169 19 C -0.055 4.055 20 C -0.183 4.183 21 O -0.366 6.366 22 Si 0.656 3.344 23 C -0.126 4.126 24 C 0.000 4.000 25 N -0.164 5.164 26 C -0.190 4.190 27 H 0.144 0.856 28 H 0.134 0.866 29 H 0.139 0.861 30 H 0.146 0.854 31 H 0.142 0.858 32 H 0.136 0.864 33 H 0.155 0.845 34 H 0.168 0.832 35 H 0.104 0.896 36 H 0.133 0.867 37 H 0.251 0.749 38 H 0.168 0.832 39 H 0.161 0.839 40 H 0.155 0.845 41 H 0.121 0.879 42 H 0.247 0.753 43 H -0.231 1.231 44 H -0.219 1.219 45 H 0.160 0.840 46 H 0.276 0.724 47 H 0.131 0.869 48 H 0.098 0.902 Dipole moment (debyes) X Y Z Total from point charges 10.616 -16.691 27.283 33.699 hybrid contribution 0.398 1.465 0.770 1.702 sum 11.013 -15.226 28.053 33.765 Atomic orbital electron populations 1.24270 0.76851 1.09580 1.09306 1.44822 1.15443 1.19524 1.14693 0.72436 1.24124 1.05819 1.02306 0.86572 1.23934 1.06156 0.99426 0.81847 1.23013 0.95655 1.02060 0.93010 0.85167 1.23286 0.95136 1.04060 0.93897 1.22120 1.00123 0.83388 0.95943 0.90675 1.45328 1.39710 1.13265 1.36155 1.17156 0.80342 0.85172 0.79592 1.90901 1.44362 1.46343 1.62059 1.19969 0.99848 0.88084 1.01790 1.21110 1.01282 0.94173 0.98506 1.18434 1.00722 0.94439 1.00559 1.20596 0.98724 0.91920 0.96946 1.20644 0.98562 0.96772 1.00912 1.19186 0.96287 0.93769 0.96257 1.24795 1.06269 0.94317 0.92927 1.86518 1.87004 1.31624 1.31442 0.94111 0.76503 0.78414 0.85392 1.19968 1.02775 0.88936 1.00920 1.18310 0.97704 0.89431 0.94538 1.41604 1.35383 1.05959 1.33451 1.23810 0.96977 1.04354 0.93872 0.85572 0.86639 0.86130 0.85383 0.85811 0.86400 0.84542 0.83172 0.89629 0.86702 0.74908 0.83190 0.83911 0.84452 0.87949 0.75350 1.23052 1.21885 0.83973 0.72427 0.86863 0.90234 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.58 8.57 127.69 1.09 4.68 16 2 N -0.37 24.66 0.66 -948.87 -0.62 24.03 16 3 H 0.44 -31.14 8.41 -89.69 -0.75 -31.89 16 4 C -0.05 3.00 9.19 127.69 1.17 4.17 16 5 C 0.01 -0.52 4.57 86.30 0.39 -0.12 16 6 C -0.12 6.53 3.18 -10.27 -0.03 6.50 16 7 H 0.13 -7.63 8.10 -2.39 -0.02 -7.65 16 8 C -0.13 5.67 7.39 31.12 0.23 5.90 16 9 C 0.09 -3.18 4.32 45.52 0.20 -2.98 16 10 H 0.07 -2.00 7.47 -2.39 -0.02 -2.01 16 11 N -0.69 22.18 5.26 -443.64 -2.33 19.85 16 12 C 0.59 -11.50 7.80 86.56 0.68 -10.83 16 13 O -0.56 5.28 16.44 -4.18 -0.07 5.21 16 14 C 0.01 -0.23 6.97 39.91 0.28 0.05 16 15 C -0.12 1.50 10.53 22.55 0.24 1.74 16 16 C -0.14 1.60 6.16 -21.36 -0.13 1.47 16 17 C -0.06 0.76 10.06 22.30 0.22 0.98 16 18 C -0.15 1.86 8.59 22.01 0.19 2.05 16 19 C -0.05 0.69 5.43 -19.83 -0.11 0.59 16 20 C -0.07 1.12 2.80 71.24 0.20 1.32 16 21 O -0.56 7.42 12.73 -148.98 -1.90 5.52 16 22 Si 0.75 -10.29 29.75 68.60 2.04 -8.25 16 23 C -0.11 1.62 9.61 22.37 0.22 1.83 16 24 C 0.11 -1.72 7.25 39.13 0.28 -1.43 16 25 N -0.56 12.68 6.07 -177.18 -1.08 11.60 16 26 C -0.15 6.95 5.69 31.12 0.18 7.12 16 27 H 0.13 -7.82 8.14 -2.39 -0.02 -7.84 16 28 H 0.12 -6.87 5.13 -2.39 -0.01 -6.89 16 29 H 0.12 -7.36 8.11 -2.39 -0.02 -7.38 16 30 H 0.13 -8.30 8.11 -2.39 -0.02 -8.32 16 31 H 0.12 -7.88 8.14 -2.39 -0.02 -7.90 16 32 H 0.12 -7.42 8.14 -2.39 -0.02 -7.44 16 33 H 0.14 -8.54 7.79 -2.39 -0.02 -8.55 16 34 H 0.15 -9.75 8.09 -2.39 -0.02 -9.77 16 35 H 0.09 -3.72 8.14 -2.39 -0.02 -3.74 16 36 H 0.11 -5.25 8.10 -2.39 -0.02 -5.27 16 37 H 0.41 -16.32 7.76 -92.71 -0.72 -17.03 16 38 H 0.15 -1.72 8.06 -2.91 -0.02 -1.75 16 39 H 0.14 -2.15 8.06 -2.91 -0.02 -2.18 16 40 H 0.14 -2.05 4.82 -2.91 -0.01 -2.06 16 41 H 0.10 -2.04 7.96 -2.39 -0.02 -2.06 16 42 H 0.40 -8.10 8.74 -74.06 -0.65 -8.75 16 43 H -0.30 1.71 7.11 99.48 0.71 2.41 16 44 H -0.29 2.54 7.11 99.48 0.71 3.24 16 45 H 0.14 -2.76 8.06 -2.91 -0.02 -2.78 16 46 H 0.43 -13.93 8.12 -92.71 -0.75 -14.68 16 47 H 0.11 -5.33 7.90 -2.38 -0.02 -5.35 16 48 H 0.08 -3.47 7.18 -2.39 -0.02 -3.49 16 Total: 1.00 -87.65 381.76 -0.48 -88.13 By element: Atomic # 1 Polarization: -167.30 SS G_CDS: -1.82 Total: -169.12 kcal Atomic # 6 Polarization: 17.73 SS G_CDS: 5.30 Total: 23.03 kcal Atomic # 7 Polarization: 59.51 SS G_CDS: -4.03 Total: 55.48 kcal Atomic # 8 Polarization: 12.69 SS G_CDS: -1.97 Total: 10.73 kcal Atomic # 14 Polarization: -10.29 SS G_CDS: 2.04 Total: -8.25 kcal Total: -87.65 -0.48 -88.13 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13158378.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 217.601 kcal (2) G-P(sol) polarization free energy of solvation -87.650 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 129.952 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.483 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.132 kcal (6) G-S(sol) free energy of system = (1) + (5) 129.469 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds