Wall clock time and date at job start Sun Mar 7 2021 06:31:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00901 * 109.47165 * 2 1 4 4 C 1.46898 * 109.46960 * 119.99888 * 2 1 3 5 5 C 1.46904 * 109.46955 * 239.99713 * 2 1 3 6 6 C 1.53005 * 109.46981 * 174.99861 * 5 2 1 7 7 H 1.09004 * 112.84778 * 43.80623 * 6 5 2 8 8 C 1.53776 * 113.61376 * 175.00128 * 6 5 2 9 9 C 1.53781 * 87.08299 * 139.98323 * 8 6 5 10 10 H 1.08996 * 113.61444 * 219.93591 * 9 8 6 11 11 N 1.46500 * 113.61489 * 89.11354 * 9 8 6 12 12 C 1.34773 * 119.99658 * 156.53208 * 11 9 8 13 13 O 1.21573 * 120.00430 * 359.97438 * 12 11 9 14 14 C 1.47655 * 119.99611 * 180.02562 * 12 11 9 15 15 C 1.40165 * 119.97852 * 0.02562 * 14 12 11 16 16 C 1.36350 * 120.67283 * 179.97438 * 15 14 12 17 17 C 1.39327 * 120.23804 * 0.02562 * 16 15 14 18 18 N 1.37402 * 133.25305 * 179.97438 * 17 16 15 19 19 C 1.36864 * 109.97892 * 180.02562 * 18 17 16 20 20 C 1.34187 * 109.96990 * 359.97438 * 19 18 17 21 21 C 1.50700 * 126.54023 * 180.02562 * 20 19 18 22 22 O 1.42901 * 109.46881 * 254.97206 * 21 20 19 23 23 Si 1.86296 * 109.47089 * 14.97050 * 21 20 19 24 24 C 1.40911 * 119.63692 * 359.72388 * 17 16 15 25 25 C 1.39196 * 119.97303 * 180.02562 * 14 12 11 26 26 C 1.53789 * 87.16989 * 334.52651 * 9 8 6 27 27 H 1.09004 * 109.46911 * 180.02562 * 1 2 3 28 28 H 1.08997 * 109.47223 * 299.99913 * 1 2 3 29 29 H 1.09000 * 109.47307 * 60.00311 * 1 2 3 30 30 H 1.08999 * 109.47214 * 60.00181 * 4 2 1 31 31 H 1.09004 * 109.46839 * 179.97438 * 4 2 1 32 32 H 1.08996 * 109.47522 * 299.99631 * 4 2 1 33 33 H 1.08996 * 109.47062 * 54.99780 * 5 2 1 34 34 H 1.08998 * 109.46889 * 294.99870 * 5 2 1 35 35 H 1.08997 * 113.61485 * 25.42867 * 8 6 5 36 36 H 1.08999 * 113.69020 * 254.54365 * 8 6 5 37 37 H 0.96998 * 119.99961 * 336.52773 * 11 9 8 38 38 H 1.08003 * 119.66112 * 359.97438 * 15 14 12 39 39 H 1.08003 * 119.88152 * 179.97438 * 16 15 14 40 40 H 0.97000 * 125.00471 * 0.05211 * 18 17 16 41 41 H 1.08007 * 125.01179 * 179.97438 * 19 18 17 42 42 H 1.09000 * 109.47232 * 134.97103 * 21 20 19 43 43 H 0.96698 * 113.99663 * 179.97438 * 22 21 20 44 44 H 1.48495 * 110.00185 * 300.00035 * 23 21 20 45 45 H 1.48506 * 110.00193 * 61.32374 * 23 21 20 46 46 H 1.08002 * 120.29874 * 0.02562 * 25 14 12 47 47 H 1.08992 * 113.61431 * 140.02430 * 26 9 8 48 48 H 1.09005 * 113.61024 * 270.92764 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6926 -1.1994 6 6 3.4835 -0.5846 -1.2639 7 1 3.9616 -0.7639 -0.3009 8 6 4.1092 -1.3821 -2.4203 9 6 5.0668 -0.1950 -2.6169 10 1 5.2597 0.0417 -3.6632 11 7 6.2923 -0.2913 -1.8201 12 6 7.4007 0.3711 -2.2060 13 8 7.3838 1.0482 -3.2155 14 6 8.6361 0.2736 -1.4032 15 6 8.6557 -0.5085 -0.2402 16 6 9.7888 -0.6090 0.5115 17 6 10.9456 0.0679 0.1309 18 7 12.2055 0.1569 0.6719 19 6 12.9907 0.9674 -0.1025 20 6 12.2864 1.4229 -1.1499 21 6 12.7857 2.3405 -2.2360 22 8 12.2559 3.6520 -2.0323 23 14 14.6467 2.4077 -2.1854 24 6 10.9404 0.8532 -1.0391 25 6 9.7805 0.9584 -1.8019 26 6 3.9827 0.6873 -1.9754 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5138 0.8900 29 1 -0.3634 0.5138 -0.8900 30 1 1.5954 -1.7201 1.1995 31 1 3.0487 -0.6929 1.1992 32 1 1.5954 -0.1786 2.0894 33 1 1.5240 -0.2331 -2.0871 34 1 1.6703 -1.7428 -1.1557 35 1 3.4312 -1.5399 -3.2590 36 1 4.6081 -2.2973 -2.1015 37 1 6.3059 -0.8318 -1.0147 38 1 7.7640 -1.0369 0.0637 39 1 9.7895 -1.2149 1.4056 40 1 12.4956 -0.2892 1.4829 41 1 14.0247 1.2052 0.0997 42 1 12.4619 1.9646 -3.2066 43 1 12.5367 4.2970 -2.6959 44 1 15.1008 2.9187 -0.8672 45 1 15.2106 1.0554 -2.4276 46 1 9.7698 1.5625 -2.6971 47 1 4.3793 1.4420 -1.2965 48 1 3.2701 1.0944 -2.6929 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13287722.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:19 Heat of formation + Delta-G solvation = 127.122306 kcal Electronic energy + Delta-G solvation = -28002.532174 eV Core-core repulsion = 24143.817100 eV Total energy + Delta-G solvation = -3858.715074 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 331.181 amu Computer time = 0.87 seconds Orbital eigenvalues (eV) -42.61952 -42.19113 -41.01241 -39.22390 -37.91649 -37.50237 -34.63298 -33.49368 -31.16371 -30.75422 -29.81531 -29.36406 -26.85111 -26.53852 -26.03968 -25.02910 -23.62011 -23.55952 -21.89792 -20.74347 -20.46419 -19.33557 -19.18702 -18.57629 -18.37957 -17.70159 -17.49665 -17.30604 -16.98201 -16.21183 -16.12025 -15.77804 -15.54219 -15.28511 -15.16404 -15.00985 -14.89831 -14.84695 -14.27378 -14.03272 -13.90121 -13.75090 -13.61596 -13.54210 -13.46399 -13.22631 -13.12237 -12.88362 -12.76729 -12.67364 -12.14280 -12.02764 -11.97767 -11.70185 -11.33189 -11.17268 -10.94213 -10.26843 -10.19823 -9.47261 -8.97654 -4.98159 -0.26962 0.07331 1.04315 1.28119 1.29277 1.64705 1.74905 1.89391 1.92255 2.00338 2.77991 2.92511 2.97832 3.18306 3.40896 3.43996 3.44939 3.53847 3.61719 3.66912 3.77296 3.81323 3.90451 3.94010 4.03272 4.14358 4.20381 4.28087 4.30347 4.38166 4.39731 4.45035 4.47235 4.52623 4.66488 4.67734 4.75119 4.77244 4.83979 4.85405 4.88627 4.88805 4.97035 5.04141 5.13912 5.15990 5.23125 5.34690 5.43163 5.54391 5.83805 6.37082 6.44108 6.88376 7.14540 Molecular weight = 331.18amu Principal moments of inertia in cm(-1) A = 0.022314 B = 0.002377 C = 0.002264 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1254.523291 B =11779.147155 C =12363.468686 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.373 5.373 3 H 0.435 0.565 4 C -0.055 4.055 5 C 0.008 3.992 6 C -0.119 4.119 7 H 0.133 0.867 8 C -0.124 4.124 9 C 0.089 3.911 10 H 0.066 0.934 11 N -0.692 5.692 12 C 0.566 3.434 13 O -0.586 6.586 14 C -0.179 4.179 15 C -0.054 4.054 16 C -0.129 4.129 17 C 0.110 3.890 18 N -0.575 5.575 19 C 0.053 3.947 20 C -0.180 4.180 21 C -0.051 4.051 22 O -0.568 6.568 23 Si 0.778 3.222 24 C -0.132 4.132 25 C -0.018 4.018 26 C -0.152 4.152 27 H 0.122 0.878 28 H 0.124 0.876 29 H 0.123 0.877 30 H 0.124 0.876 31 H 0.123 0.877 32 H 0.125 0.875 33 H 0.140 0.860 34 H 0.146 0.854 35 H 0.113 0.887 36 H 0.087 0.913 37 H 0.417 0.583 38 H 0.177 0.823 39 H 0.164 0.836 40 H 0.437 0.563 41 H 0.181 0.819 42 H 0.073 0.927 43 H 0.399 0.601 44 H -0.284 1.284 45 H -0.289 1.289 46 H 0.112 0.888 47 H 0.074 0.926 48 H 0.110 0.890 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -31.355 -7.034 9.591 33.535 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.051 4.949 3 H 0.271 0.729 4 C -0.197 4.197 5 C -0.113 4.113 6 C -0.137 4.137 7 H 0.151 0.849 8 C -0.162 4.162 9 C -0.016 4.016 10 H 0.084 0.916 11 N -0.345 5.345 12 C 0.355 3.645 13 O -0.466 6.466 14 C -0.184 4.184 15 C -0.074 4.074 16 C -0.149 4.149 17 C 0.000 4.000 18 N -0.179 5.179 19 C -0.074 4.074 20 C -0.187 4.187 21 C -0.161 4.161 22 O -0.377 6.377 23 Si 0.682 3.318 24 C -0.137 4.137 25 C -0.038 4.038 26 C -0.191 4.191 27 H 0.140 0.860 28 H 0.142 0.858 29 H 0.141 0.859 30 H 0.143 0.857 31 H 0.141 0.859 32 H 0.143 0.857 33 H 0.158 0.842 34 H 0.164 0.836 35 H 0.131 0.869 36 H 0.106 0.894 37 H 0.256 0.744 38 H 0.194 0.806 39 H 0.181 0.819 40 H 0.278 0.722 41 H 0.198 0.802 42 H 0.091 0.909 43 H 0.250 0.750 44 H -0.210 1.210 45 H -0.216 1.216 46 H 0.130 0.870 47 H 0.093 0.907 48 H 0.128 0.872 Dipole moment (debyes) X Y Z Total from point charges -30.974 -7.456 9.903 33.363 hybrid contribution 0.612 -0.029 0.306 0.685 sum -30.362 -7.485 10.209 32.895 Atomic orbital electron populations 1.24126 0.75513 1.09601 1.09578 1.44821 1.15990 1.19320 1.14789 0.72858 1.24220 1.05850 1.02698 0.86960 1.23926 0.95097 1.03778 0.88544 1.23121 0.93632 0.96246 1.00736 0.84938 1.23267 0.97081 0.96596 0.99305 1.22051 0.83871 1.00039 0.95688 0.91552 1.45307 1.09781 1.50090 1.29284 1.18289 0.83960 0.78599 0.83676 1.90801 1.85250 1.42673 1.27924 1.19639 0.93682 1.05370 0.99664 1.20935 0.98877 0.96005 0.91584 1.20154 0.89558 1.02112 1.03053 1.18835 0.87613 0.99498 0.94057 1.41718 1.08484 1.42566 1.25088 1.21845 0.97515 0.95923 0.92145 1.20097 0.93647 1.05207 0.99730 1.24246 1.11106 0.83779 0.96970 1.86456 1.75704 1.19065 1.56518 0.93764 0.71986 0.82211 0.83866 1.19170 0.94245 1.02594 0.97671 1.20643 0.90531 0.95165 0.97423 1.23726 0.97962 0.96810 1.00589 0.85979 0.85756 0.85889 0.85718 0.85894 0.85680 0.84183 0.83617 0.86903 0.89407 0.74369 0.80577 0.81880 0.72199 0.80204 0.90948 0.75000 1.21040 1.21625 0.86966 0.90733 0.87206 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.95 9.19 127.69 1.17 4.12 16 2 N -0.37 24.55 0.66 -948.83 -0.62 23.93 16 3 H 0.44 -29.49 8.44 -89.69 -0.76 -30.25 16 4 C -0.06 3.53 8.98 127.69 1.15 4.68 16 5 C 0.01 -0.52 4.48 86.30 0.39 -0.13 16 6 C -0.12 6.31 3.47 -10.18 -0.04 6.27 16 7 H 0.13 -7.54 6.10 -2.38 -0.01 -7.55 16 8 C -0.12 5.35 7.38 31.12 0.23 5.58 16 9 C 0.09 -2.88 4.30 45.52 0.20 -2.69 16 10 H 0.07 -1.50 7.50 -2.39 -0.02 -1.52 16 11 N -0.69 19.90 5.21 -443.09 -2.31 17.59 16 12 C 0.57 -8.71 7.76 86.73 0.67 -8.04 16 13 O -0.59 2.63 15.95 -3.94 -0.06 2.57 16 14 C -0.18 2.62 5.87 -20.09 -0.12 2.50 16 15 C -0.05 1.25 9.46 22.30 0.21 1.46 16 16 C -0.13 2.61 10.00 22.09 0.22 2.83 16 17 C 0.11 -1.38 7.27 39.19 0.28 -1.10 16 18 N -0.57 8.31 6.05 -187.48 -1.13 7.18 16 19 C 0.05 -0.54 10.43 82.98 0.87 0.33 16 20 C -0.18 1.16 5.61 -18.61 -0.10 1.05 16 21 C -0.05 0.49 3.05 71.24 0.22 0.71 16 22 O -0.57 4.99 12.86 -148.98 -1.92 3.07 16 23 Si 0.78 -10.19 30.79 68.60 2.11 -8.08 16 24 C -0.13 0.90 6.34 -20.21 -0.13 0.77 16 25 C -0.02 0.13 9.64 22.74 0.22 0.34 16 26 C -0.15 6.50 7.45 31.21 0.23 6.74 16 27 H 0.12 -7.68 8.14 -2.38 -0.02 -7.70 16 28 H 0.12 -7.82 8.14 -2.39 -0.02 -7.83 16 29 H 0.12 -7.73 8.11 -2.39 -0.02 -7.75 16 30 H 0.12 -7.92 8.11 -2.39 -0.02 -7.94 16 31 H 0.12 -7.82 6.10 -2.38 -0.01 -7.83 16 32 H 0.12 -7.91 8.14 -2.39 -0.02 -7.93 16 33 H 0.14 -8.65 7.79 -2.39 -0.02 -8.67 16 34 H 0.15 -9.17 8.09 -2.39 -0.02 -9.19 16 35 H 0.11 -4.94 8.10 -2.39 -0.02 -4.96 16 36 H 0.09 -3.68 8.14 -2.39 -0.02 -3.70 16 37 H 0.42 -15.45 6.71 -92.71 -0.62 -16.07 16 38 H 0.18 -6.09 6.36 -2.91 -0.02 -6.11 16 39 H 0.16 -4.45 8.06 -2.91 -0.02 -4.47 16 40 H 0.44 -9.36 8.96 -92.71 -0.83 -10.19 16 41 H 0.18 -2.39 6.30 -2.91 -0.02 -2.41 16 42 H 0.07 -0.78 7.96 -2.39 -0.02 -0.80 16 43 H 0.40 -7.54 8.74 -74.06 -0.65 -8.19 16 44 H -0.28 2.29 7.04 99.48 0.70 2.99 16 45 H -0.29 2.20 7.11 99.48 0.71 2.90 16 46 H 0.11 -0.34 7.64 -2.91 -0.02 -0.37 16 47 H 0.07 -2.96 8.14 -2.39 -0.02 -2.98 16 48 H 0.11 -4.83 7.90 -2.38 -0.02 -4.85 16 Total: 1.00 -91.59 384.05 -0.07 -91.66 By element: Atomic # 1 Polarization: -161.54 SS G_CDS: -1.81 Total: -163.35 kcal Atomic # 6 Polarization: 19.77 SS G_CDS: 5.67 Total: 25.44 kcal Atomic # 7 Polarization: 52.76 SS G_CDS: -4.07 Total: 48.69 kcal Atomic # 8 Polarization: 7.62 SS G_CDS: -1.98 Total: 5.64 kcal Atomic # 14 Polarization: -10.19 SS G_CDS: 2.11 Total: -8.08 kcal Total: -91.59 -0.07 -91.66 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13287722.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 218.785 kcal (2) G-P(sol) polarization free energy of solvation -91.589 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 127.196 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.074 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -91.662 kcal (6) G-S(sol) free energy of system = (1) + (5) 127.122 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.87 seconds