Wall clock time and date at job start Sun Mar 7 2021 06:31:25 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46896 * 1 3 3 H 1.00906 * 109.47429 * 2 1 4 4 C 1.46896 * 109.47327 * 119.99849 * 2 1 3 5 5 C 1.46902 * 109.46986 * 240.00258 * 2 1 3 6 6 C 1.53003 * 109.47075 * 175.00054 * 5 2 1 7 7 H 1.09007 * 112.90910 * 316.25064 * 6 5 2 8 8 C 1.53783 * 113.61632 * 87.49923 * 6 5 2 9 9 C 1.53781 * 87.08212 * 139.98320 * 8 6 5 10 10 H 1.08998 * 113.68989 * 220.00899 * 9 8 6 11 11 N 1.46495 * 113.61181 * 89.11657 * 9 8 6 12 12 C 1.34783 * 120.00024 * 107.50753 * 11 9 8 13 13 O 1.21513 * 119.99590 * 359.97438 * 12 11 9 14 14 C 1.48167 * 120.00073 * 179.97438 * 12 11 9 15 15 N 1.32721 * 119.72387 * 359.97438 * 14 12 11 16 16 C 1.31524 * 121.64041 * 179.97438 * 15 14 12 17 17 C 1.38558 * 120.90318 * 0.02562 * 16 15 14 18 18 C 1.50703 * 120.32082 * 179.97438 * 17 16 15 19 19 O 1.42899 * 109.47352 * 245.00106 * 18 17 16 20 20 Si 1.86306 * 109.46914 * 5.00206 * 18 17 16 21 21 C 1.38625 * 119.35395 * 359.97438 * 17 16 15 22 22 C 1.38590 * 118.48819 * 359.97438 * 21 17 16 23 23 C 1.53772 * 113.61600 * 184.99697 * 6 5 2 24 24 H 1.08996 * 109.47273 * 179.97438 * 1 2 3 25 25 H 1.09001 * 109.47092 * 299.99942 * 1 2 3 26 26 H 1.09003 * 109.47295 * 59.99997 * 1 2 3 27 27 H 1.09001 * 109.47245 * 60.00034 * 4 2 1 28 28 H 1.08999 * 109.47474 * 180.02562 * 4 2 1 29 29 H 1.09001 * 109.47205 * 300.00140 * 4 2 1 30 30 H 1.08992 * 109.47319 * 54.99964 * 5 2 1 31 31 H 1.09005 * 109.47126 * 294.99341 * 5 2 1 32 32 H 1.08993 * 113.61256 * 25.43274 * 8 6 5 33 33 H 1.09005 * 113.61259 * 254.53504 * 8 6 5 34 34 H 0.96999 * 120.00660 * 287.49960 * 11 9 8 35 35 H 1.07999 * 119.54329 * 180.02562 * 16 15 14 36 36 H 1.08993 * 109.46986 * 124.99984 * 18 17 16 37 37 H 0.96707 * 113.99844 * 60.00060 * 19 18 17 38 38 H 1.48505 * 109.99653 * 179.97438 * 20 18 17 39 39 H 1.48496 * 109.99963 * 301.31554 * 20 18 17 40 40 H 1.07996 * 120.75096 * 180.02562 * 21 17 16 41 41 H 1.07997 * 120.46527 * 179.97438 * 22 21 17 42 42 H 1.09002 * 113.61583 * 105.47214 * 23 6 5 43 43 H 1.09001 * 113.61850 * 334.56917 * 23 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9587 -0.6924 1.1994 5 6 1.9586 -0.6925 -1.1995 6 6 3.4835 -0.5845 -1.2639 7 1 3.8484 0.4151 -1.0277 8 6 4.2130 -1.7028 -0.5010 9 6 5.2160 -1.7358 -1.6663 10 1 5.5293 -2.7416 -1.9461 11 7 6.3430 -0.8153 -1.4967 12 6 7.5687 -1.2965 -1.2089 13 8 7.7387 -2.4937 -1.0898 14 6 8.7086 -0.3656 -1.0379 15 7 8.5167 0.9410 -1.1698 16 6 9.5013 1.8010 -1.0255 17 6 10.7845 1.3705 -0.7289 18 6 11.9031 2.3674 -0.5670 19 8 12.8679 2.1732 -1.6030 20 14 11.2152 4.0954 -0.6747 21 6 11.0293 0.0139 -0.5825 22 6 9.9726 -0.8691 -0.7390 23 6 4.0890 -1.1737 -2.5488 24 1 -0.3633 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3634 0.5138 -0.8900 27 1 1.5954 -1.7201 1.1995 28 1 3.0486 -0.6920 1.1997 29 1 1.5953 -0.1786 2.0894 30 1 1.5240 -0.2330 -2.0871 31 1 1.6703 -1.7428 -1.1558 32 1 3.6283 -2.6173 -0.4023 33 1 4.6500 -1.3747 0.4421 34 1 6.2072 0.1404 -1.5915 35 1 9.3069 2.8572 -1.1399 36 1 12.3785 2.2254 0.4035 37 1 12.5138 2.2843 -2.4961 38 1 12.3084 5.0880 -0.5159 39 1 10.5365 4.2914 -1.9808 40 1 12.0206 -0.3465 -0.3509 41 1 10.1274 -1.9326 -0.6323 42 1 4.4260 -0.4185 -3.2589 43 1 3.4703 -1.9436 -3.0099 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_13287726.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:25 Heat of formation + Delta-G solvation = 132.364693 kcal Electronic energy + Delta-G solvation = -23415.312635 eV Core-core repulsion = 19968.814788 eV Total energy + Delta-G solvation = -3446.497847 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 293.165 amu Computer time = 0.53 seconds Orbital eigenvalues (eV) -44.54620 -42.86303 -41.91268 -40.38908 -38.79657 -35.94840 -34.57841 -33.84917 -32.26959 -31.97140 -28.96506 -28.49092 -27.99429 -26.08353 -25.85591 -24.78438 -23.17020 -22.29129 -21.38723 -20.52361 -20.04744 -19.75503 -19.50894 -18.74577 -18.11684 -17.74215 -17.49251 -17.31546 -17.12041 -16.94947 -16.78126 -16.35498 -16.15337 -16.00219 -15.97103 -15.78910 -15.58236 -15.40301 -15.19191 -15.13131 -15.09448 -14.61653 -14.27990 -14.07712 -13.44432 -13.38298 -13.10861 -12.87167 -12.35146 -11.92278 -11.58183 -11.50582 -11.42921 -11.14868 -5.81568 -1.47442 -1.45133 -0.80593 0.38038 0.49632 0.53881 0.60005 0.70176 0.74468 0.75979 1.20007 1.30358 1.39646 1.61651 1.67091 1.75866 1.78373 1.84853 1.94547 1.96169 2.02761 2.16849 2.19960 2.29237 2.33805 2.35994 2.46360 2.61696 2.71705 2.88916 2.95501 2.98868 3.06505 3.13089 3.21174 3.25489 3.33124 3.50424 3.59584 3.71711 4.00224 4.14398 4.19979 4.50078 5.16683 5.52468 5.62474 6.01779 Molecular weight = 293.17amu Principal moments of inertia in cm(-1) A = 0.021424 B = 0.003341 C = 0.003048 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1306.613633 B = 8378.182021 C = 9184.612992 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.385 5.385 3 H 0.427 0.573 4 C -0.056 4.056 5 C 0.000 4.000 6 C -0.148 4.148 7 H 0.113 0.887 8 C -0.158 4.158 9 C 0.123 3.877 10 H 0.116 0.884 11 N -0.703 5.703 12 C 0.581 3.419 13 O -0.517 6.517 14 C 0.071 3.929 15 N -0.457 5.457 16 C 0.101 3.899 17 C -0.140 4.140 18 C -0.077 4.077 19 O -0.522 6.522 20 Si 0.686 3.314 21 C -0.051 4.051 22 C -0.104 4.104 23 C -0.130 4.130 24 H 0.122 0.878 25 H 0.124 0.876 26 H 0.123 0.877 27 H 0.122 0.878 28 H 0.126 0.874 29 H 0.123 0.877 30 H 0.133 0.867 31 H 0.132 0.868 32 H 0.104 0.896 33 H 0.085 0.915 34 H 0.412 0.588 35 H 0.167 0.833 36 H 0.127 0.873 37 H 0.379 0.621 38 H -0.249 1.249 39 H -0.255 1.255 40 H 0.151 0.849 41 H 0.154 0.846 42 H 0.091 0.909 43 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -27.652 1.018 4.824 28.088 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.039 4.961 3 H 0.261 0.739 4 C -0.197 4.197 5 C -0.121 4.121 6 C -0.167 4.167 7 H 0.131 0.869 8 C -0.197 4.197 9 C 0.017 3.983 10 H 0.134 0.866 11 N -0.355 5.355 12 C 0.366 3.634 13 O -0.391 6.391 14 C -0.067 4.067 15 N -0.168 5.168 16 C -0.058 4.058 17 C -0.142 4.142 18 C -0.187 4.187 19 O -0.329 6.329 20 Si 0.586 3.414 21 C -0.077 4.077 22 C -0.125 4.125 23 C -0.169 4.169 24 H 0.140 0.860 25 H 0.143 0.857 26 H 0.142 0.858 27 H 0.141 0.859 28 H 0.144 0.856 29 H 0.141 0.859 30 H 0.151 0.849 31 H 0.150 0.850 32 H 0.122 0.878 33 H 0.104 0.896 34 H 0.249 0.751 35 H 0.183 0.817 36 H 0.145 0.855 37 H 0.226 0.774 38 H -0.173 1.173 39 H -0.180 1.180 40 H 0.169 0.831 41 H 0.171 0.829 42 H 0.110 0.890 43 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -28.087 0.788 4.792 28.504 hybrid contribution 1.288 0.044 -0.891 1.567 sum -26.799 0.832 3.901 27.094 Atomic orbital electron populations 1.24139 0.75667 1.09626 1.09565 1.45080 1.16179 1.18877 1.15950 0.73866 1.24314 1.06329 1.02417 0.86685 1.24120 0.98240 1.02542 0.87188 1.23269 0.90065 1.01705 1.01631 0.86873 1.23834 0.98382 0.98176 0.99268 1.21726 0.85416 0.96088 0.95115 0.86618 1.45444 1.07252 1.10849 1.71942 1.17886 0.82149 0.87169 0.76186 1.90865 1.83896 1.14923 1.49424 1.20978 0.93626 0.90575 1.01518 1.67461 1.35183 1.02069 1.12093 1.22683 0.87993 0.99364 0.95776 1.21663 0.96719 0.96365 0.99460 1.25073 0.91557 1.06951 0.95142 1.86683 1.36269 1.92310 1.17600 0.95236 0.84364 0.74677 0.87097 1.21652 1.00052 0.91934 0.94030 1.22249 0.91773 1.02562 0.95878 1.23324 0.96706 1.01685 0.95161 0.85987 0.85741 0.85842 0.85938 0.85557 0.85858 0.84940 0.85020 0.87772 0.89621 0.75108 0.81678 0.85511 0.77353 1.17298 1.17995 0.83149 0.82869 0.89038 0.87300 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.53 9.19 60.06 0.55 2.08 16 2 N -0.39 12.62 0.66 -251.26 -0.17 12.45 16 3 H 0.43 -14.67 8.41 -39.29 -0.33 -15.00 16 4 C -0.06 1.72 8.57 60.06 0.51 2.23 16 5 C 0.00 -0.01 4.57 -3.82 -0.02 -0.03 16 6 C -0.15 3.91 3.18 -89.81 -0.29 3.62 16 7 H 0.11 -3.08 8.10 -51.93 -0.42 -3.50 16 8 C -0.16 3.61 5.69 -25.92 -0.15 3.47 16 9 C 0.12 -2.22 4.32 -67.12 -0.29 -2.51 16 10 H 0.12 -1.74 7.46 -51.93 -0.39 -2.13 16 11 N -0.70 10.81 5.25 -53.86 -0.28 10.53 16 12 C 0.58 -6.14 7.81 -12.18 -0.10 -6.23 16 13 O -0.52 3.62 15.92 5.35 0.09 3.71 16 14 C 0.07 -0.71 6.75 -83.01 -0.56 -1.27 16 15 N -0.46 5.04 9.54 -9.80 -0.09 4.94 16 16 C 0.10 -1.14 9.84 -17.57 -0.17 -1.32 16 17 C -0.14 1.48 5.37 -104.36 -0.56 0.92 16 18 C -0.08 0.80 2.82 36.01 0.10 0.90 16 19 O -0.52 4.24 12.84 -35.23 -0.45 3.79 16 20 Si 0.69 -7.52 29.91 -169.99 -5.08 -12.60 16 21 C -0.05 0.51 9.83 -39.31 -0.39 0.12 16 22 C -0.10 0.99 9.63 -39.05 -0.38 0.61 16 23 C -0.13 2.87 7.39 -25.92 -0.19 2.67 16 24 H 0.12 -3.81 8.14 -51.93 -0.42 -4.23 16 25 H 0.12 -3.93 8.14 -51.93 -0.42 -4.35 16 26 H 0.12 -3.90 8.11 -51.93 -0.42 -4.32 16 27 H 0.12 -3.74 8.11 -51.93 -0.42 -4.16 16 28 H 0.13 -3.75 5.13 -51.93 -0.27 -4.01 16 29 H 0.12 -3.82 8.14 -51.93 -0.42 -4.25 16 30 H 0.13 -4.08 8.09 -51.93 -0.42 -4.50 16 31 H 0.13 -4.00 7.79 -51.93 -0.40 -4.41 16 32 H 0.10 -2.47 7.89 -51.93 -0.41 -2.88 16 33 H 0.09 -1.88 7.18 -51.93 -0.37 -2.26 16 34 H 0.41 -7.03 8.03 -40.82 -0.33 -7.36 16 35 H 0.17 -2.20 4.86 -52.49 -0.25 -2.46 16 36 H 0.13 -1.40 7.96 -51.93 -0.41 -1.81 16 37 H 0.38 -4.14 8.70 45.56 0.40 -3.74 16 38 H -0.25 1.64 7.11 56.52 0.40 2.04 16 39 H -0.26 2.42 7.01 56.52 0.40 2.81 16 40 H 0.15 -1.61 8.06 -52.49 -0.42 -2.03 16 41 H 0.15 -1.46 7.64 -52.49 -0.40 -1.87 16 42 H 0.09 -1.89 8.14 -51.93 -0.42 -2.31 16 43 H 0.11 -2.45 8.10 -51.93 -0.42 -2.87 16 LS Contribution 345.40 15.07 5.21 5.21 Total: 1.00 -37.02 345.40 -9.30 -46.31 By element: Atomic # 1 Polarization: -73.00 SS G_CDS: -6.59 Total: -79.59 kcal Atomic # 6 Polarization: 7.18 SS G_CDS: -1.92 Total: 5.26 kcal Atomic # 7 Polarization: 28.47 SS G_CDS: -0.54 Total: 27.93 kcal Atomic # 8 Polarization: 7.86 SS G_CDS: -0.37 Total: 7.49 kcal Atomic # 14 Polarization: -7.52 SS G_CDS: -5.08 Total: -12.60 kcal Total LS contribution 5.21 Total: 5.21 kcal Total: -37.02 -9.30 -46.31 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13287726.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.676 kcal (2) G-P(sol) polarization free energy of solvation -37.016 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 141.660 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.295 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -46.311 kcal (6) G-S(sol) free energy of system = (1) + (5) 132.365 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.53 seconds