Wall clock time and date at job start Sun Mar 7 2021 06:31:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46506 * 1 3 3 C 1.34661 * 124.84910 * 2 1 4 4 C 1.36770 * 108.39462 * 180.19311 * 3 2 1 5 5 C 1.47259 * 126.93899 * 179.83606 * 4 3 2 6 6 O 1.21636 * 120.00038 * 179.69115 * 5 4 3 7 7 N 1.34772 * 120.00414 * 359.69390 * 5 4 3 8 8 C 1.46506 * 120.00033 * 180.02562 * 7 5 4 9 9 H 1.08992 * 112.90684 * 336.24748 * 8 7 5 10 10 C 1.54049 * 113.61276 * 107.61836 * 8 7 5 11 11 C 1.53781 * 87.08031 * 89.07129 * 10 8 7 12 12 H 1.08999 * 113.61181 * 270.87794 * 11 10 8 13 13 C 1.52991 * 113.61611 * 139.97702 * 11 10 8 14 14 N 1.46905 * 109.47546 * 87.50100 * 13 11 10 15 15 H 1.00899 * 109.46630 * 55.00246 * 14 13 11 16 16 C 1.46897 * 109.47326 * 175.00122 * 14 13 11 17 17 C 1.46899 * 109.46784 * 295.00313 * 14 13 11 18 18 C 1.53781 * 87.08070 * 25.42738 * 11 10 8 19 19 C 1.46681 * 106.11512 * 359.57979 * 4 3 2 20 20 C 1.34488 * 106.33303 * 0.25763 * 19 4 3 21 21 C 1.50698 * 125.57142 * 180.02562 * 20 19 4 22 22 O 1.42900 * 109.47311 * 209.97789 * 21 20 19 23 23 Si 1.86310 * 109.47183 * 329.97526 * 21 20 19 24 24 H 1.09005 * 109.46710 * 270.28135 * 1 2 3 25 25 H 1.08996 * 109.47212 * 30.27866 * 1 2 3 26 26 H 1.08999 * 109.47134 * 150.28634 * 1 2 3 27 27 H 1.08000 * 125.79982 * 0.06228 * 3 2 1 28 28 H 0.97002 * 120.00078 * 359.97438 * 7 5 4 29 29 H 1.09005 * 113.62125 * 334.52173 * 10 8 7 30 30 H 1.09003 * 113.61268 * 203.61961 * 10 8 7 31 31 H 1.08997 * 109.47550 * 207.50008 * 13 11 10 32 32 H 1.09002 * 109.47334 * 327.50277 * 13 11 10 33 33 H 1.08999 * 109.47501 * 60.00304 * 16 14 13 34 34 H 1.09003 * 109.47141 * 180.02562 * 16 14 13 35 35 H 1.08998 * 109.47145 * 299.99831 * 16 14 13 36 36 H 1.08997 * 109.47233 * 60.00092 * 17 14 13 37 37 H 1.09003 * 109.46527 * 179.97438 * 17 14 13 38 38 H 1.08999 * 109.47194 * 299.99176 * 17 14 13 39 39 H 1.09002 * 113.61445 * 89.11830 * 18 11 10 40 40 H 1.09002 * 113.61408 * 219.93560 * 18 11 10 41 41 H 1.08000 * 126.83710 * 180.29268 * 19 4 3 42 42 H 1.09001 * 109.47233 * 89.97540 * 21 20 19 43 43 H 0.96704 * 114.00179 * 60.00116 * 22 21 20 44 44 H 1.48501 * 109.99767 * 58.68178 * 23 21 20 45 45 H 1.48504 * 109.99665 * 179.97438 * 23 21 20 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4651 0.0000 0.0000 3 6 2.2345 1.1051 0.0000 4 6 3.5462 0.7177 -0.0044 5 6 4.7283 1.5958 -0.0093 6 8 5.8447 1.1129 -0.0072 7 7 4.5733 2.9346 -0.0161 8 6 5.7495 3.8082 -0.0216 9 1 6.6383 3.3255 0.3846 10 6 5.9889 4.5121 -1.3707 11 6 5.0843 5.6424 -0.8521 12 1 4.0278 5.4930 -1.0748 13 6 5.5789 7.0420 -1.2225 14 7 5.0498 7.4153 -2.5412 15 1 4.0443 7.3323 -2.5359 16 6 5.4250 8.8028 -2.8444 17 6 5.6096 6.5219 -3.5641 18 6 5.4829 5.2037 0.5669 19 6 3.5376 -0.7491 0.0032 20 6 2.2448 -1.1196 0.0055 21 6 1.7398 -2.5395 0.0135 22 8 0.4805 -2.6010 -0.6590 23 14 2.9644 -3.6391 -0.8596 24 1 -0.3633 0.0050 1.0277 25 1 -0.3633 0.8874 -0.5181 26 1 -0.3633 -0.8925 -0.5094 27 1 1.8767 2.1241 0.0010 28 1 3.6831 3.3198 -0.0181 29 1 5.5722 3.9757 -2.2233 30 1 7.0237 4.8175 -1.5262 31 1 5.2342 7.7584 -0.4768 32 1 6.6684 7.0459 -1.2538 33 1 6.5112 8.8926 -2.8502 34 1 5.0320 9.0800 -3.8227 35 1 5.0096 9.4657 -2.0854 36 1 5.3312 5.4924 -3.3391 37 1 5.2167 6.7987 -4.5425 38 1 6.6959 6.6117 -3.5698 39 1 6.3793 5.6983 0.9412 40 1 4.6580 5.2271 1.2790 41 1 4.3981 -1.4016 0.0067 42 1 1.6187 -2.8763 1.0431 43 1 0.5132 -2.3151 -1.5823 44 1 4.2869 -3.5594 -0.1887 45 1 2.4783 -5.0423 -0.8579 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13287730.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:31:28 Heat of formation + Delta-G solvation = 118.278951 kcal Electronic energy + Delta-G solvation = -24188.586218 eV Core-core repulsion = 20714.166088 eV Total energy + Delta-G solvation = -3474.420129 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.54143 -42.18039 -40.58986 -38.87143 -37.84967 -34.55439 -33.70360 -31.51056 -30.03874 -29.47587 -27.59917 -26.67401 -26.47392 -25.70948 -24.18905 -23.39827 -21.17601 -20.80062 -20.47303 -19.08767 -18.97954 -17.83946 -17.40262 -17.33783 -16.96104 -16.81748 -16.66267 -15.95882 -15.60408 -15.49271 -15.46631 -15.05390 -14.87101 -14.64459 -14.12281 -14.00897 -13.74304 -13.53761 -13.52244 -13.45691 -13.27798 -13.26807 -13.04975 -13.01336 -12.70394 -12.22335 -12.15072 -12.10271 -11.63101 -11.32584 -11.09929 -10.74103 -10.12830 -9.61365 -9.25585 -5.07823 0.70558 0.97229 1.06562 1.33141 1.58633 1.84425 2.02215 2.21209 2.49339 2.90831 2.99146 3.23959 3.25207 3.39302 3.49297 3.51468 3.77362 3.82019 3.86038 3.93029 4.05716 4.21863 4.23850 4.31793 4.34472 4.37144 4.38401 4.43324 4.48854 4.56247 4.73717 4.75064 4.78010 4.80971 4.84792 4.87099 4.90483 4.93484 4.99151 4.99936 5.07818 5.20258 5.56064 5.63140 5.91218 6.22307 6.55520 6.60749 7.32612 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.024218 B = 0.003219 C = 0.003092 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1155.867531 B = 8696.353310 C = 9052.175654 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.044 3.956 2 N -0.421 5.421 3 C 0.083 3.917 4 C -0.264 4.264 5 C 0.590 3.410 6 O -0.600 6.600 7 N -0.695 5.695 8 C 0.089 3.911 9 H 0.061 0.939 10 C -0.151 4.151 11 C -0.114 4.114 12 H 0.135 0.865 13 C 0.009 3.991 14 N -0.367 5.367 15 H 0.439 0.561 16 C -0.046 4.046 17 C -0.057 4.057 18 C -0.127 4.127 19 C -0.170 4.170 20 C -0.017 4.017 21 C -0.034 4.034 22 O -0.544 6.544 23 Si 0.787 3.213 24 H 0.070 0.930 25 H 0.115 0.885 26 H 0.113 0.887 27 H 0.220 0.780 28 H 0.416 0.584 29 H 0.080 0.920 30 H 0.107 0.893 31 H 0.150 0.850 32 H 0.133 0.867 33 H 0.116 0.884 34 H 0.125 0.875 35 H 0.127 0.873 36 H 0.117 0.883 37 H 0.127 0.873 38 H 0.117 0.883 39 H 0.109 0.891 40 H 0.085 0.915 41 H 0.125 0.875 42 H 0.111 0.889 43 H 0.398 0.602 44 H -0.300 1.300 45 H -0.293 1.293 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.985 31.801 -11.665 33.887 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.095 4.095 2 N -0.095 5.095 3 C -0.055 4.055 4 C -0.274 4.274 5 C 0.380 3.620 6 O -0.481 6.481 7 N -0.347 5.347 8 C -0.016 4.016 9 H 0.080 0.920 10 C -0.189 4.189 11 C -0.132 4.132 12 H 0.153 0.847 13 C -0.113 4.113 14 N 0.057 4.943 15 H 0.277 0.723 16 C -0.188 4.188 17 C -0.200 4.200 18 C -0.165 4.165 19 C -0.195 4.195 20 C -0.127 4.127 21 C -0.145 4.145 22 O -0.353 6.353 23 Si 0.694 3.306 24 H 0.089 0.911 25 H 0.134 0.866 26 H 0.131 0.869 27 H 0.237 0.763 28 H 0.254 0.746 29 H 0.099 0.901 30 H 0.125 0.875 31 H 0.168 0.832 32 H 0.151 0.849 33 H 0.134 0.866 34 H 0.143 0.857 35 H 0.146 0.854 36 H 0.135 0.865 37 H 0.146 0.854 38 H 0.136 0.864 39 H 0.127 0.873 40 H 0.103 0.897 41 H 0.143 0.857 42 H 0.128 0.872 43 H 0.249 0.751 44 H -0.227 1.227 45 H -0.221 1.221 Dipole moment (debyes) X Y Z Total from point charges 0.015 30.574 -11.043 32.508 hybrid contribution -0.272 -0.500 1.030 1.176 sum -0.257 30.074 -10.013 31.698 Atomic orbital electron populations 1.22797 0.74275 1.07779 1.04698 1.43746 1.08133 1.04460 1.53113 1.22496 0.88440 0.93372 1.01148 1.20278 0.92767 0.93147 1.21202 1.17626 0.87319 0.82735 0.74305 1.90794 1.28115 1.76429 1.52800 1.45204 1.10123 1.03958 1.75373 1.22051 0.88791 0.91042 0.99734 0.92035 1.23826 1.01760 0.96701 0.96641 1.22971 1.01941 0.91813 0.96516 0.84716 1.23915 1.04875 0.98750 0.83803 1.44800 1.19999 1.15283 1.14255 0.72303 1.24120 1.07396 0.79049 1.08276 1.24270 1.04984 0.97310 0.93418 1.23268 1.04032 0.92639 0.96600 1.21745 0.95178 0.94593 1.07944 1.20635 0.90245 0.89878 1.11922 1.24597 0.93527 0.94678 1.01728 1.86454 1.28913 1.89427 1.30472 0.93424 0.73489 0.75422 0.88295 0.91093 0.86649 0.86853 0.76311 0.74597 0.90093 0.87493 0.83208 0.84878 0.86581 0.85682 0.85412 0.86511 0.85413 0.86400 0.87309 0.89657 0.85681 0.87196 0.75088 1.22749 1.22069 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.04 -1.18 10.71 127.77 1.37 0.19 16 2 N -0.42 9.18 3.09 -533.23 -1.65 7.54 16 3 C 0.08 -2.09 10.83 83.92 0.91 -1.18 16 4 C -0.26 4.32 6.29 -19.04 -0.12 4.20 16 5 C 0.59 -9.15 7.81 86.62 0.68 -8.47 16 6 O -0.60 2.03 16.57 -4.14 -0.07 1.96 16 7 N -0.69 20.36 5.25 -443.01 -2.33 18.03 16 8 C 0.09 -2.91 4.34 45.61 0.20 -2.71 16 9 H 0.06 -1.34 7.46 -2.39 -0.02 -1.36 16 10 C -0.15 6.60 5.70 31.21 0.18 6.78 16 11 C -0.11 6.13 3.18 -10.27 -0.03 6.09 16 12 H 0.14 -7.84 8.10 -2.39 -0.02 -7.86 16 13 C 0.01 -0.53 4.57 86.30 0.39 -0.14 16 14 N -0.37 24.49 0.66 -948.87 -0.62 23.87 16 15 H 0.44 -31.35 8.41 -89.70 -0.75 -32.10 16 16 C -0.05 3.00 9.19 127.69 1.17 4.17 16 17 C -0.06 3.56 8.57 127.69 1.09 4.65 16 18 C -0.13 5.46 7.38 31.12 0.23 5.69 16 19 C -0.17 1.88 9.49 23.62 0.22 2.10 16 20 C -0.02 0.27 6.14 40.98 0.25 0.52 16 21 C -0.03 0.54 2.98 71.24 0.21 0.76 16 22 O -0.54 10.34 9.95 -148.98 -1.48 8.86 16 23 Si 0.79 -10.93 31.30 68.60 2.15 -8.79 16 24 H 0.07 -1.76 8.14 -2.38 -0.02 -1.78 16 25 H 0.12 -3.82 8.13 -2.39 -0.02 -3.84 16 26 H 0.11 -2.92 4.93 -2.39 -0.01 -2.93 16 27 H 0.22 -8.11 7.45 -2.91 -0.02 -8.13 16 28 H 0.42 -15.83 7.64 -92.71 -0.71 -16.54 16 29 H 0.08 -3.41 7.18 -2.38 -0.02 -3.43 16 30 H 0.11 -4.77 7.90 -2.39 -0.02 -4.79 16 31 H 0.15 -9.61 8.09 -2.39 -0.02 -9.63 16 32 H 0.13 -8.14 7.79 -2.39 -0.02 -8.16 16 33 H 0.12 -7.25 8.14 -2.39 -0.02 -7.27 16 34 H 0.12 -7.98 8.14 -2.39 -0.02 -8.00 16 35 H 0.13 -8.26 8.11 -2.39 -0.02 -8.28 16 36 H 0.12 -6.93 5.13 -2.39 -0.01 -6.95 16 37 H 0.13 -7.96 8.14 -2.39 -0.02 -7.98 16 38 H 0.12 -7.12 8.11 -2.39 -0.02 -7.14 16 39 H 0.11 -4.69 8.10 -2.39 -0.02 -4.71 16 40 H 0.08 -3.54 8.14 -2.39 -0.02 -3.56 16 41 H 0.13 -0.80 6.67 -2.91 -0.02 -0.82 16 42 H 0.11 -1.53 7.96 -2.39 -0.02 -1.55 16 43 H 0.40 -10.79 8.38 -74.05 -0.62 -11.41 16 44 H -0.30 1.79 6.77 99.48 0.67 2.46 16 45 H -0.29 1.97 7.11 99.48 0.71 2.68 16 Total: 1.00 -90.65 354.15 1.68 -88.97 By element: Atomic # 1 Polarization: -162.02 SS G_CDS: -1.07 Total: -163.10 kcal Atomic # 6 Polarization: 15.90 SS G_CDS: 6.76 Total: 22.66 kcal Atomic # 7 Polarization: 54.03 SS G_CDS: -4.60 Total: 49.44 kcal Atomic # 8 Polarization: 12.37 SS G_CDS: -1.55 Total: 10.82 kcal Atomic # 14 Polarization: -10.93 SS G_CDS: 2.15 Total: -8.79 kcal Total: -90.65 1.68 -88.97 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13287730.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 207.251 kcal (2) G-P(sol) polarization free energy of solvation -90.655 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 116.596 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.972 kcal (6) G-S(sol) free energy of system = (1) + (5) 118.279 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.65 seconds