Wall clock time and date at job start Sun Mar 7 2021 06:32:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50698 * 1 3 3 C 1.37787 * 119.85212 * 2 1 4 4 C 1.39715 * 119.90559 * 179.97438 * 3 2 1 5 5 C 1.47536 * 120.18804 * 179.97438 * 4 3 2 6 6 O 1.21589 * 119.99648 * 180.02562 * 5 4 3 7 7 N 1.34780 * 120.00140 * 0.02562 * 5 4 3 8 8 C 1.46500 * 120.00000 * 179.97438 * 7 5 4 9 9 H 1.08996 * 112.84846 * 334.66960 * 8 7 5 10 10 C 1.53784 * 113.61216 * 105.86468 * 8 7 5 11 11 C 1.54043 * 86.98471 * 89.16177 * 10 8 7 12 12 H 1.09004 * 113.61068 * 270.88073 * 11 10 8 13 13 C 1.52998 * 113.69534 * 139.99073 * 11 10 8 14 14 N 1.46905 * 109.47437 * 87.46274 * 13 11 10 15 15 H 1.00899 * 109.47250 * 305.00540 * 14 13 11 16 16 C 1.46900 * 109.46974 * 65.00203 * 14 13 11 17 17 C 1.46895 * 109.47153 * 185.00021 * 14 13 11 18 18 C 1.53773 * 87.07970 * 25.42830 * 11 10 8 19 19 C 1.40137 * 119.61930 * 0.02562 * 4 3 2 20 20 O 1.35647 * 120.14948 * 179.97438 * 19 4 3 21 21 C 1.38707 * 119.69825 * 359.97438 * 19 4 3 22 22 C 1.50702 * 119.95637 * 180.02562 * 21 19 4 23 23 O 1.42899 * 109.46768 * 75.00079 * 22 21 19 24 24 Si 1.86300 * 109.47224 * 194.99831 * 22 21 19 25 25 C 1.38052 * 120.08775 * 0.02562 * 21 19 4 26 26 H 1.09001 * 109.47268 * 90.00007 * 1 2 3 27 27 H 1.09001 * 109.47505 * 210.00709 * 1 2 3 28 28 H 1.09005 * 109.46657 * 330.00235 * 1 2 3 29 29 H 1.08000 * 120.04497 * 0.27583 * 3 2 1 30 30 H 0.96995 * 120.00019 * 359.97438 * 7 5 4 31 31 H 1.09006 * 113.61130 * 203.66742 * 10 8 7 32 32 H 1.09002 * 113.61194 * 334.56537 * 10 8 7 33 33 H 1.08999 * 109.47527 * 207.46610 * 13 11 10 34 34 H 1.09000 * 109.47197 * 327.46638 * 13 11 10 35 35 H 1.08993 * 109.47410 * 180.02562 * 16 14 13 36 36 H 1.09004 * 109.47042 * 300.00358 * 16 14 13 37 37 H 1.08999 * 109.47178 * 59.99666 * 16 14 13 38 38 H 1.09000 * 109.47251 * 60.00637 * 17 14 13 39 39 H 1.09002 * 109.46810 * 180.02562 * 17 14 13 40 40 H 1.08998 * 109.47667 * 300.00084 * 17 14 13 41 41 H 1.09000 * 113.61976 * 220.01869 * 18 11 10 42 42 H 1.09003 * 113.69179 * 89.13149 * 18 11 10 43 43 H 0.96701 * 114.00553 * 89.99639 * 20 19 4 44 44 H 1.08990 * 109.47210 * 315.00035 * 22 21 19 45 45 H 0.96701 * 114.00806 * 60.00468 * 23 22 21 46 46 H 1.48492 * 110.00071 * 179.97438 * 24 22 21 47 47 H 1.48506 * 109.99886 * 301.32196 * 24 22 21 48 48 H 1.07997 * 119.80814 * 179.97438 * 25 21 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.1928 1.1950 0.0000 4 6 3.5900 1.1964 0.0005 5 6 4.3307 2.4723 0.0000 6 8 5.5466 2.4694 0.0000 7 7 3.6595 3.6411 -0.0005 8 6 4.3950 4.9081 -0.0005 9 1 5.3925 4.8184 0.4296 10 6 4.3717 5.6339 -1.3561 11 6 3.0807 6.3220 -0.8736 12 1 2.1741 5.7658 -1.1123 13 6 2.9902 7.7996 -1.2598 14 7 2.3882 7.9210 -2.5943 15 1 2.9134 7.3647 -3.2521 16 6 0.9991 7.4452 -2.5500 17 6 2.4106 9.3282 -3.0155 18 6 3.5863 6.0898 0.5600 19 6 4.2837 -0.0213 0.0005 20 8 5.6402 -0.0325 0.0005 21 6 3.5770 -1.2148 0.0005 22 6 4.3172 -2.5275 0.0011 23 8 4.8543 -2.7709 1.3028 24 14 3.1445 -3.9019 -0.4536 25 6 2.1966 -1.2018 0.0000 26 1 -0.3634 0.0000 -1.0277 27 1 -0.3634 -0.8899 0.5139 28 1 -0.3633 0.8901 0.5138 29 1 1.6512 2.1294 0.0045 30 1 2.6896 3.6434 -0.0009 31 1 5.2060 6.3210 -1.4979 32 1 4.2218 4.9676 -2.2056 33 1 2.3729 8.3280 -0.5333 34 1 3.9898 8.2341 -1.2714 35 1 0.5525 7.5349 -3.5402 36 1 0.9825 6.4011 -2.2374 37 1 0.4317 8.0462 -1.8394 38 1 3.4413 9.6812 -3.0485 39 1 1.9635 9.4182 -4.0055 40 1 1.8432 9.9292 -2.3049 41 1 2.8027 5.7914 1.2565 42 1 4.2062 6.9007 0.9425 43 1 6.0335 -0.0358 0.8839 44 1 5.1288 -2.4873 -0.7252 45 1 4.1871 -2.8193 2.0010 46 1 3.8623 -5.2017 -0.4572 47 1 2.0162 -3.9468 0.5110 48 1 1.6509 -2.1337 -0.0004 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13422088.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:00 Heat of formation + Delta-G solvation = 48.980780 kcal Electronic energy + Delta-G solvation = -27913.719501 eV Core-core repulsion = 24054.811956 eV Total energy + Delta-G solvation = -3858.907545 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -42.26850 -41.70303 -40.44703 -38.97975 -38.07692 -37.80423 -34.74096 -33.11282 -32.67497 -30.04718 -29.36591 -27.57853 -26.87934 -26.82401 -26.11693 -25.15058 -23.60607 -22.10288 -21.73660 -20.49597 -19.66796 -19.30177 -18.50348 -18.07188 -17.66657 -17.47183 -17.20533 -16.96320 -16.64498 -16.11559 -16.02674 -15.82924 -15.57027 -15.21281 -14.91918 -14.82261 -14.43188 -14.27213 -14.01595 -13.74431 -13.64564 -13.54056 -13.47266 -13.35760 -13.22424 -13.12186 -12.98860 -12.83309 -12.56722 -12.28398 -12.03948 -11.89626 -11.77498 -11.70353 -11.34820 -11.10281 -10.61393 -10.31598 -10.04403 -9.53546 -5.02133 -0.39020 0.03082 1.04198 1.19087 1.46183 1.65836 1.88314 1.97726 2.49796 2.92241 2.97254 3.15481 3.17407 3.31520 3.39939 3.43230 3.46060 3.51855 3.72904 3.75755 3.79778 3.89492 4.08344 4.13973 4.20527 4.27886 4.34590 4.38864 4.45881 4.50349 4.52423 4.56887 4.66614 4.73541 4.75782 4.78353 4.82825 4.85372 4.88111 4.88915 4.93619 4.95922 5.02374 5.13480 5.17458 5.22779 5.39243 5.52048 5.64662 6.39532 6.40595 6.63535 7.13406 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.020264 B = 0.002974 C = 0.002730 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1381.402232 B = 9414.081591 C =10252.808566 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.118 4.118 2 C -0.093 4.093 3 C -0.052 4.052 4 C -0.180 4.180 5 C 0.558 3.442 6 O -0.565 6.565 7 N -0.693 5.693 8 C 0.091 3.909 9 H 0.065 0.935 10 C -0.153 4.153 11 C -0.118 4.118 12 H 0.134 0.866 13 C 0.008 3.992 14 N -0.373 5.373 15 H 0.435 0.565 16 C -0.055 4.055 17 C -0.046 4.046 18 C -0.124 4.124 19 C 0.159 3.841 20 O -0.495 6.495 21 C -0.154 4.154 22 C -0.082 4.082 23 O -0.547 6.547 24 Si 0.774 3.226 25 C -0.084 4.084 26 H 0.090 0.910 27 H 0.067 0.933 28 H 0.090 0.910 29 H 0.173 0.827 30 H 0.416 0.584 31 H 0.108 0.892 32 H 0.074 0.926 33 H 0.146 0.854 34 H 0.139 0.861 35 H 0.125 0.875 36 H 0.123 0.877 37 H 0.124 0.876 38 H 0.122 0.878 39 H 0.124 0.876 40 H 0.122 0.878 41 H 0.088 0.912 42 H 0.112 0.888 43 H 0.401 0.599 44 H 0.108 0.892 45 H 0.386 0.614 46 H -0.311 1.311 47 H -0.263 1.263 48 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -14.761 31.015 -9.920 35.752 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C -0.094 4.094 3 C -0.071 4.071 4 C -0.184 4.184 5 C 0.346 3.654 6 O -0.444 6.444 7 N -0.347 5.347 8 C -0.015 4.015 9 H 0.084 0.916 10 C -0.191 4.191 11 C -0.137 4.137 12 H 0.151 0.849 13 C -0.114 4.114 14 N 0.051 4.949 15 H 0.271 0.729 16 C -0.197 4.197 17 C -0.188 4.188 18 C -0.163 4.163 19 C 0.113 3.887 20 O -0.307 6.307 21 C -0.155 4.155 22 C -0.190 4.190 23 O -0.356 6.356 24 Si 0.678 3.322 25 C -0.102 4.102 26 H 0.109 0.891 27 H 0.086 0.914 28 H 0.108 0.892 29 H 0.190 0.810 30 H 0.255 0.745 31 H 0.126 0.874 32 H 0.093 0.907 33 H 0.164 0.836 34 H 0.157 0.843 35 H 0.144 0.856 36 H 0.142 0.858 37 H 0.143 0.857 38 H 0.140 0.860 39 H 0.143 0.857 40 H 0.140 0.860 41 H 0.106 0.894 42 H 0.130 0.870 43 H 0.260 0.740 44 H 0.126 0.874 45 H 0.235 0.765 46 H -0.240 1.240 47 H -0.189 1.189 48 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -13.919 30.483 -10.419 35.092 hybrid contribution 0.896 -0.723 1.702 2.054 sum -13.023 29.760 -8.717 33.634 Atomic orbital electron populations 1.20925 0.87983 1.04383 1.04108 1.20134 0.98071 0.91822 0.99326 1.21412 0.90544 0.99764 0.95357 1.20416 0.95164 0.92453 1.10341 1.18238 0.86747 0.84562 0.75824 1.90853 1.15406 1.87881 1.50252 1.45342 1.10547 1.03914 1.74883 1.22023 0.96723 0.83087 0.99649 0.91642 1.23720 0.98857 0.99810 0.96730 1.23116 0.99389 0.94332 0.96832 0.84871 1.23917 1.05134 0.98716 0.83587 1.44816 1.16633 1.17030 1.16415 0.72855 1.24227 0.79631 1.06056 1.09821 1.24124 1.09497 0.78605 1.06615 1.23265 1.00017 0.96568 0.96405 1.18613 0.83464 0.91146 0.95516 1.84658 1.15696 1.96105 1.34215 1.20588 0.94640 0.94954 1.05301 1.25160 1.05764 1.00299 0.87799 1.86616 1.38088 1.93673 1.17179 0.94023 0.76018 0.73522 0.88633 1.21432 0.92200 1.00092 0.96490 0.89147 0.91373 0.89155 0.80993 0.74512 0.87359 0.90748 0.83606 0.84297 0.85636 0.85817 0.85727 0.85963 0.85715 0.85978 0.89363 0.86995 0.74049 0.87376 0.76482 1.23988 1.18868 0.83603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.12 3.39 10.00 71.24 0.71 4.11 16 2 C -0.09 2.25 5.87 -19.90 -0.12 2.13 16 3 C -0.05 1.37 9.18 22.52 0.21 1.58 16 4 C -0.18 3.25 5.89 -20.01 -0.12 3.13 16 5 C 0.56 -9.83 7.76 86.69 0.67 -9.16 16 6 O -0.56 3.80 14.78 16.92 0.25 4.05 16 7 N -0.69 21.12 5.21 -443.20 -2.31 18.81 16 8 C 0.09 -3.04 4.30 45.52 0.20 -2.85 16 9 H 0.07 -1.55 7.50 -2.39 -0.02 -1.56 16 10 C -0.15 6.64 7.45 31.21 0.23 6.87 16 11 C -0.12 6.39 3.46 -10.18 -0.04 6.35 16 12 H 0.13 -7.73 6.10 -2.38 -0.01 -7.74 16 13 C 0.01 -0.52 4.49 86.30 0.39 -0.13 16 14 N -0.37 24.82 0.66 -948.86 -0.62 24.20 16 15 H 0.44 -29.83 8.44 -89.69 -0.76 -30.59 16 16 C -0.06 3.59 8.98 127.69 1.15 4.74 16 17 C -0.05 2.99 9.19 127.69 1.17 4.16 16 18 C -0.12 5.48 7.38 31.12 0.23 5.71 16 19 C 0.16 -1.90 6.69 22.84 0.15 -1.75 16 20 O -0.49 3.34 10.91 -68.70 -0.75 2.59 16 21 C -0.15 2.24 5.27 -19.80 -0.10 2.14 16 22 C -0.08 1.00 2.38 71.24 0.17 1.17 16 23 O -0.55 5.21 12.88 -148.98 -1.92 3.29 16 24 Si 0.77 -11.44 30.24 68.60 2.07 -9.36 16 25 C -0.08 1.64 8.30 22.30 0.19 1.83 16 26 H 0.09 -2.76 8.14 -2.39 -0.02 -2.78 16 27 H 0.07 -1.81 8.08 -2.39 -0.02 -1.83 16 28 H 0.09 -2.93 8.08 -2.38 -0.02 -2.95 16 29 H 0.17 -6.28 6.40 -2.91 -0.02 -6.30 16 30 H 0.42 -16.07 6.73 -92.71 -0.62 -16.69 16 31 H 0.11 -4.81 7.91 -2.38 -0.02 -4.83 16 32 H 0.07 -3.01 8.14 -2.39 -0.02 -3.03 16 33 H 0.15 -9.29 8.09 -2.39 -0.02 -9.30 16 34 H 0.14 -8.65 7.80 -2.39 -0.02 -8.67 16 35 H 0.13 -8.06 8.14 -2.39 -0.02 -8.08 16 36 H 0.12 -8.02 6.10 -2.39 -0.01 -8.03 16 37 H 0.12 -8.03 8.11 -2.39 -0.02 -8.05 16 38 H 0.12 -7.73 8.11 -2.39 -0.02 -7.75 16 39 H 0.12 -7.92 8.14 -2.39 -0.02 -7.94 16 40 H 0.12 -7.75 8.14 -2.39 -0.02 -7.77 16 41 H 0.09 -3.80 8.14 -2.39 -0.02 -3.82 16 42 H 0.11 -4.98 8.10 -2.39 -0.02 -4.99 16 43 H 0.40 -4.08 9.06 -74.06 -0.67 -4.75 16 44 H 0.11 -1.05 7.83 -2.39 -0.02 -1.07 16 45 H 0.39 -6.27 8.70 -74.06 -0.64 -6.91 16 46 H -0.31 1.52 7.11 99.48 0.71 2.23 16 47 H -0.26 3.70 6.68 99.48 0.66 4.37 16 48 H 0.15 -3.15 4.83 -2.91 -0.01 -3.17 16 Total: 1.00 -88.53 379.88 0.12 -88.41 By element: Atomic # 1 Polarization: -160.33 SS G_CDS: -1.69 Total: -162.02 kcal Atomic # 6 Polarization: 24.94 SS G_CDS: 5.09 Total: 30.03 kcal Atomic # 7 Polarization: 45.94 SS G_CDS: -2.94 Total: 43.01 kcal Atomic # 8 Polarization: 12.35 SS G_CDS: -2.42 Total: 9.94 kcal Atomic # 14 Polarization: -11.44 SS G_CDS: 2.07 Total: -9.36 kcal Total: -88.53 0.12 -88.41 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13422088.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 137.392 kcal (2) G-P(sol) polarization free energy of solvation -88.529 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 48.863 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.118 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -88.411 kcal (6) G-S(sol) free energy of system = (1) + (5) 48.981 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds