Wall clock time and date at job start Sun Mar 7 2021 06:32:04 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 C 1.46898 * 111.00443 * 2 1 4 4 C 1.39055 * 110.99854 * 236.04434 * 2 1 3 5 5 C 1.39191 * 119.93184 * 240.00353 * 4 2 1 6 6 C 1.50697 * 119.96790 * 359.97438 * 5 4 2 7 7 O 1.42902 * 109.47290 * 285.00486 * 6 5 4 8 8 Si 1.86301 * 109.46984 * 165.00232 * 6 5 4 9 9 C 1.37629 * 120.06745 * 180.02562 * 5 4 2 10 10 C 1.39775 * 119.93266 * 359.97438 * 9 5 4 11 11 C 1.47516 * 120.07338 * 179.97438 * 10 9 5 12 12 O 1.21601 * 119.99840 * 359.97438 * 11 10 9 13 13 N 1.34779 * 120.00293 * 179.97438 * 11 10 9 14 14 C 1.46505 * 119.99899 * 179.97438 * 13 11 10 15 15 H 1.09000 * 112.84645 * 23.80718 * 14 13 11 16 16 C 1.53783 * 113.61134 * 155.00253 * 14 13 11 17 17 C 1.53785 * 87.07846 * 89.11472 * 16 14 13 18 18 H 1.08991 * 113.61806 * 270.80037 * 17 16 14 19 19 C 1.53006 * 113.61104 * 139.97688 * 17 16 14 20 20 N 1.46900 * 109.46996 * 174.99863 * 19 17 16 21 21 H 1.00903 * 109.47138 * 55.00605 * 20 19 17 22 22 C 1.46894 * 109.47268 * 175.00162 * 20 19 17 23 23 C 1.46901 * 109.47354 * 295.00691 * 20 19 17 24 24 C 1.53778 * 113.61166 * 252.49945 * 14 13 11 25 25 C 1.39814 * 119.86006 * 359.97438 * 10 9 5 26 26 C 1.37593 * 119.93201 * 359.74793 * 25 10 9 27 27 H 1.09002 * 109.47401 * 183.95136 * 1 2 3 28 28 H 1.09001 * 109.46874 * 63.95149 * 1 2 3 29 29 H 1.09004 * 109.46970 * 303.95282 * 1 2 3 30 30 H 1.09006 * 109.46770 * 56.04400 * 3 2 1 31 31 H 1.09001 * 109.47456 * 176.04615 * 3 2 1 32 32 H 1.09000 * 109.46814 * 296.04921 * 3 2 1 33 33 H 1.09000 * 109.47093 * 45.00522 * 6 5 4 34 34 H 0.96699 * 114.00359 * 59.99790 * 7 6 5 35 35 H 1.48498 * 110.00276 * 300.00002 * 8 6 5 36 36 H 1.48498 * 110.00038 * 61.32155 * 8 6 5 37 37 H 1.08000 * 120.03577 * 179.97438 * 9 5 4 38 38 H 0.96996 * 120.00036 * 0.02562 * 13 11 10 39 39 H 1.08992 * 113.61289 * 203.66530 * 16 14 13 40 40 H 1.08999 * 113.61487 * 334.57124 * 16 14 13 41 41 H 1.08998 * 109.47257 * 295.00140 * 19 17 16 42 42 H 1.09001 * 109.46762 * 55.00504 * 19 17 16 43 43 H 1.09001 * 109.47059 * 60.00103 * 22 20 19 44 44 H 1.08994 * 109.47824 * 180.02562 * 22 20 19 45 45 H 1.09008 * 109.47363 * 300.00764 * 22 20 19 46 46 H 1.09000 * 109.47432 * 59.99490 * 23 20 19 47 47 H 1.08994 * 109.47027 * 180.02562 * 23 20 19 48 48 H 1.09001 * 109.46690 * 299.99724 * 23 20 19 49 49 H 1.09003 * 113.61894 * 25.43768 * 24 14 13 50 50 H 1.09004 * 113.61118 * 156.33542 * 24 14 13 51 51 H 1.08003 * 120.03829 * 180.02562 * 25 10 9 52 52 H 1.08002 * 119.96655 * 180.25069 * 26 25 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 6 1.9956 1.3714 0.0000 4 6 1.9673 -0.7251 -1.0768 5 6 2.7792 -1.8331 -0.8519 6 6 3.1174 -2.2448 0.5578 7 8 4.0868 -1.3442 1.0975 8 14 3.8120 -3.9734 0.5501 9 6 3.2743 -2.5525 -1.9156 10 6 2.9607 -2.1697 -3.2228 11 6 3.4902 -2.9382 -4.3653 12 8 4.2007 -3.9056 -4.1703 13 7 3.1864 -2.5682 -5.6252 14 6 3.7128 -3.3311 -6.7598 15 1 3.9671 -4.3581 -6.4976 16 6 2.8559 -3.2140 -8.0314 17 6 3.7051 -1.9847 -8.3955 18 1 3.3107 -1.0488 -7.9998 19 6 4.0552 -1.9004 -9.8826 20 7 4.7600 -0.6393 -10.1490 21 1 5.5629 -0.5680 -9.5420 22 6 5.2013 -0.6114 -11.5498 23 6 3.8548 0.4901 -9.8981 24 6 4.8212 -2.5982 -7.5337 25 6 2.1440 -1.0569 -3.4454 26 6 1.6474 -0.3452 -2.3776 27 1 -0.3634 -1.0252 0.0708 28 1 -0.3633 0.4513 -0.9233 29 1 -0.3633 0.5740 0.8525 30 1 1.5899 1.9163 0.8525 31 1 3.0829 1.3431 0.0709 32 1 1.7045 1.8723 -0.9233 33 1 2.2161 -2.2181 1.1702 34 1 3.7924 -0.4237 1.1319 35 1 2.8134 -4.9197 -0.0089 36 1 5.0588 -4.0162 -0.2554 37 1 3.9046 -3.4119 -1.7405 38 1 2.6199 -1.7964 -5.7807 39 1 2.9799 -4.0498 -8.7199 40 1 1.8102 -2.9791 -7.8331 41 1 4.6965 -2.7392 -10.1530 42 1 3.1403 -1.9371 -10.4739 43 1 4.3341 -0.6884 -12.2055 44 1 5.7247 0.3240 -11.7474 45 1 5.8730 -1.4495 -11.7359 46 1 3.5273 0.4694 -8.8587 47 1 4.3776 1.4257 -10.0962 48 1 2.9875 0.4131 -10.5539 49 1 5.3620 -1.8663 -6.9338 50 1 5.4825 -3.2658 -8.0862 51 1 1.8995 -0.7589 -4.4543 52 1 1.0132 0.5120 -2.5488 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13422196.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:04 Heat of formation + Delta-G solvation = 109.379885 kcal Electronic energy + Delta-G solvation = -29772.511553 eV Core-core repulsion = 25858.404153 eV Total energy + Delta-G solvation = -3914.107400 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.212 amu Computer time = 0.94 seconds Orbital eigenvalues (eV) -42.34297 -41.79821 -40.80252 -39.24296 -37.76251 -37.42291 -34.88701 -32.88670 -31.54014 -30.06854 -29.40738 -28.62753 -27.01316 -26.93059 -26.60047 -25.66447 -23.98702 -23.41625 -23.06822 -21.48378 -20.60623 -19.45185 -19.16019 -18.14802 -18.04149 -17.70748 -17.53167 -17.20650 -16.74631 -16.51066 -16.27307 -16.03744 -15.95717 -15.60097 -15.22874 -15.11164 -15.02406 -14.70538 -14.16239 -14.11881 -13.94100 -13.79604 -13.67714 -13.56729 -13.51729 -13.27299 -13.23298 -13.15904 -13.12708 -12.88718 -12.79766 -12.70849 -12.41295 -12.10100 -11.78374 -11.50183 -11.42371 -11.37920 -11.07919 -10.39469 -10.27224 -9.93004 -9.67031 -4.96349 -0.58033 -0.02702 1.00047 1.25034 1.43109 1.51735 1.79890 1.82736 2.44309 2.64018 2.87540 2.92742 3.12311 3.34283 3.36174 3.38985 3.43701 3.52201 3.69958 3.72020 3.78930 3.83949 3.92418 3.99870 4.07031 4.16292 4.23868 4.30665 4.32841 4.34664 4.37932 4.41051 4.47271 4.52948 4.54426 4.59308 4.62194 4.68199 4.70978 4.75620 4.80406 4.84865 4.85406 4.89072 4.93814 4.94339 4.95260 4.96974 5.06926 5.08279 5.36610 5.42943 5.71472 6.12147 6.25069 6.59408 6.94849 Molecular weight = 335.21amu Principal moments of inertia in cm(-1) A = 0.015054 B = 0.002814 C = 0.002530 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1859.474388 B = 9948.543481 C =11066.361445 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 N -0.530 5.530 3 C 0.024 3.976 4 C 0.132 3.868 5 C -0.115 4.115 6 C -0.065 4.065 7 O -0.545 6.545 8 Si 0.788 3.212 9 C -0.084 4.084 10 C -0.152 4.152 11 C 0.559 3.441 12 O -0.585 6.585 13 N -0.687 5.687 14 C 0.086 3.914 15 H 0.066 0.934 16 C -0.123 4.123 17 C -0.119 4.119 18 H 0.134 0.866 19 C 0.009 3.991 20 N -0.373 5.373 21 H 0.435 0.565 22 C -0.047 4.047 23 C -0.055 4.055 24 C -0.152 4.152 25 C -0.050 4.050 26 C -0.149 4.149 27 H 0.063 0.937 28 H 0.048 0.952 29 H 0.086 0.914 30 H 0.087 0.913 31 H 0.070 0.930 32 H 0.047 0.953 33 H 0.092 0.908 34 H 0.374 0.626 35 H -0.275 1.275 36 H -0.297 1.297 37 H 0.107 0.893 38 H 0.419 0.581 39 H 0.113 0.887 40 H 0.088 0.912 41 H 0.140 0.860 42 H 0.146 0.854 43 H 0.122 0.878 44 H 0.124 0.876 45 H 0.122 0.878 46 H 0.123 0.877 47 H 0.125 0.875 48 H 0.124 0.876 49 H 0.075 0.925 50 H 0.111 0.889 51 H 0.177 0.823 52 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.786 12.125 -32.182 34.399 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.121 4.121 2 N -0.252 5.252 3 C -0.122 4.122 4 C 0.037 3.963 5 C -0.116 4.116 6 C -0.175 4.175 7 O -0.352 6.352 8 Si 0.693 3.307 9 C -0.103 4.103 10 C -0.155 4.155 11 C 0.347 3.653 12 O -0.465 6.465 13 N -0.340 5.340 14 C -0.020 4.020 15 H 0.085 0.915 16 C -0.162 4.162 17 C -0.137 4.137 18 H 0.151 0.849 19 C -0.113 4.113 20 N 0.051 4.949 21 H 0.271 0.729 22 C -0.189 4.189 23 C -0.197 4.197 24 C -0.190 4.190 25 C -0.069 4.069 26 C -0.169 4.169 27 H 0.082 0.918 28 H 0.067 0.933 29 H 0.105 0.895 30 H 0.106 0.894 31 H 0.089 0.911 32 H 0.066 0.934 33 H 0.110 0.890 34 H 0.223 0.777 35 H -0.201 1.201 36 H -0.225 1.225 37 H 0.125 0.875 38 H 0.258 0.742 39 H 0.132 0.868 40 H 0.106 0.894 41 H 0.158 0.842 42 H 0.164 0.836 43 H 0.140 0.860 44 H 0.143 0.857 45 H 0.141 0.859 46 H 0.141 0.859 47 H 0.144 0.856 48 H 0.143 0.857 49 H 0.094 0.906 50 H 0.129 0.871 51 H 0.194 0.806 52 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges 1.761 10.009 -32.223 33.787 hybrid contribution -0.732 1.312 -0.691 1.654 sum 1.029 11.321 -32.914 34.822 Atomic orbital electron populations 1.22537 0.84087 1.02892 1.02565 1.59386 1.09964 1.15462 1.40339 1.22592 1.01008 0.85950 1.02665 1.18980 0.93923 0.92934 0.90487 1.20307 0.99113 0.96287 0.95913 1.25012 0.97672 1.04281 0.90526 1.86697 1.41869 1.21805 1.84791 0.92505 0.76917 0.73327 0.87975 1.21070 0.97842 0.98490 0.92936 1.19911 1.03678 0.99544 0.92346 1.18355 0.79475 0.83143 0.84324 1.90833 1.39747 1.29860 1.86107 1.45307 1.52183 1.32917 1.03571 1.22114 0.97852 0.96082 0.85917 0.91522 1.23281 0.99526 0.98949 0.94440 1.23078 0.97015 1.00544 0.93070 0.84855 1.23919 1.03239 0.86313 0.97862 1.44813 1.18131 1.14681 1.17242 0.72854 1.24130 1.06268 1.09595 0.78866 1.24226 0.97490 0.89495 1.08538 1.23682 0.96495 1.00500 0.98333 1.21477 0.92863 0.91370 1.01170 1.21960 1.01332 1.01669 0.91924 0.91833 0.93299 0.89512 0.89393 0.91082 0.93413 0.89041 0.77707 1.20148 1.22549 0.87494 0.74201 0.86825 0.89355 0.84192 0.83573 0.85954 0.85711 0.85911 0.85891 0.85631 0.85706 0.90610 0.87107 0.80564 0.82210 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.50 9.33 127.69 1.19 0.69 16 2 N -0.53 9.40 3.70 -745.08 -2.76 6.64 16 3 C 0.02 -0.50 9.10 127.69 1.16 0.66 16 4 C 0.13 -2.12 4.66 38.47 0.18 -1.94 16 5 C -0.11 1.19 5.28 -19.78 -0.10 1.09 16 6 C -0.06 0.61 2.29 71.24 0.16 0.77 16 7 O -0.54 4.48 12.65 -148.98 -1.89 2.60 16 8 Si 0.79 -5.76 30.40 68.60 2.09 -3.67 16 9 C -0.08 0.67 8.19 22.50 0.18 0.85 16 10 C -0.15 2.35 5.88 -20.08 -0.12 2.23 16 11 C 0.56 -8.63 7.76 86.69 0.67 -7.96 16 12 O -0.58 2.13 15.94 -4.03 -0.06 2.07 16 13 N -0.69 20.13 5.21 -443.20 -2.31 17.82 16 14 C 0.09 -2.80 4.33 45.52 0.20 -2.61 16 15 H 0.07 -1.51 7.46 -2.39 -0.02 -1.52 16 16 C -0.12 5.38 7.39 31.12 0.23 5.61 16 17 C -0.12 6.37 3.45 -10.26 -0.04 6.34 16 18 H 0.13 -7.70 6.10 -2.39 -0.01 -7.72 16 19 C 0.01 -0.53 4.48 86.31 0.39 -0.15 16 20 N -0.37 24.75 0.66 -948.85 -0.62 24.12 16 21 H 0.44 -29.78 8.44 -89.69 -0.76 -30.54 16 22 C -0.05 2.99 9.19 127.69 1.17 4.17 16 23 C -0.06 3.59 8.98 127.69 1.15 4.73 16 24 C -0.15 6.56 7.43 31.12 0.23 6.79 16 25 C -0.05 1.23 9.53 22.50 0.21 1.45 16 26 C -0.15 3.33 8.53 22.36 0.19 3.53 16 27 H 0.06 -1.10 8.14 -2.39 -0.02 -1.12 16 28 H 0.05 -1.10 7.08 -2.39 -0.02 -1.12 16 29 H 0.09 -1.77 8.12 -2.38 -0.02 -1.79 16 30 H 0.09 -1.91 8.12 -2.38 -0.02 -1.93 16 31 H 0.07 -1.44 7.41 -2.39 -0.02 -1.46 16 32 H 0.05 -1.12 7.33 -2.39 -0.02 -1.14 16 33 H 0.09 -1.04 7.77 -2.39 -0.02 -1.05 16 34 H 0.37 -4.85 7.48 -74.06 -0.55 -5.40 16 35 H -0.28 0.97 7.11 99.48 0.71 1.68 16 36 H -0.30 -0.05 6.81 99.48 0.68 0.62 16 37 H 0.11 -0.21 4.50 -2.91 -0.01 -0.22 16 38 H 0.42 -15.92 6.72 -92.71 -0.62 -16.54 16 39 H 0.11 -5.01 8.10 -2.39 -0.02 -5.03 16 40 H 0.09 -3.75 8.14 -2.39 -0.02 -3.77 16 41 H 0.14 -8.70 7.79 -2.39 -0.02 -8.72 16 42 H 0.15 -9.28 8.09 -2.39 -0.02 -9.30 16 43 H 0.12 -7.75 8.14 -2.39 -0.02 -7.77 16 44 H 0.12 -7.90 8.14 -2.39 -0.02 -7.92 16 45 H 0.12 -7.75 8.11 -2.38 -0.02 -7.77 16 46 H 0.12 -7.93 6.10 -2.39 -0.01 -7.94 16 47 H 0.13 -8.02 8.14 -2.39 -0.02 -8.04 16 48 H 0.12 -8.00 8.11 -2.39 -0.02 -8.02 16 49 H 0.08 -3.07 8.14 -2.39 -0.02 -3.09 16 50 H 0.11 -4.92 7.90 -2.38 -0.02 -4.94 16 51 H 0.18 -6.36 6.39 -2.91 -0.02 -6.37 16 52 H 0.16 -4.43 6.99 -2.91 -0.02 -4.45 16 Total: 1.00 -87.09 401.23 0.52 -86.58 By element: Atomic # 1 Polarization: -161.42 SS G_CDS: -0.99 Total: -162.41 kcal Atomic # 6 Polarization: 19.19 SS G_CDS: 7.07 Total: 26.26 kcal Atomic # 7 Polarization: 54.27 SS G_CDS: -5.69 Total: 48.58 kcal Atomic # 8 Polarization: 6.61 SS G_CDS: -1.95 Total: 4.67 kcal Atomic # 14 Polarization: -5.76 SS G_CDS: 2.09 Total: -3.67 kcal Total: -87.09 0.52 -86.58 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13422196.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 195.956 kcal (2) G-P(sol) polarization free energy of solvation -87.095 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 108.862 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.518 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -86.576 kcal (6) G-S(sol) free energy of system = (1) + (5) 109.380 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.94 seconds