Wall clock time and date at job start Sun Mar 7 2021 06:32:14 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46901 * 1 3 3 H 1.00902 * 109.47123 * 2 1 4 4 C 1.46896 * 109.47363 * 239.99405 * 2 1 3 5 5 C 1.46902 * 109.46784 * 119.99278 * 2 1 3 6 6 C 1.52993 * 109.47361 * 294.99985 * 5 2 1 7 7 H 1.09006 * 112.85084 * 43.80669 * 6 5 2 8 8 C 1.53780 * 113.61449 * 174.99862 * 6 5 2 9 9 C 1.53784 * 87.08117 * 139.98154 * 8 6 5 10 10 H 1.09003 * 113.61757 * 220.01703 * 9 8 6 11 11 N 1.46503 * 113.61146 * 89.12010 * 9 8 6 12 12 C 1.34772 * 119.99968 * 155.00116 * 11 9 8 13 13 O 1.21652 * 120.00294 * 359.97438 * 12 11 9 14 14 C 1.47050 * 119.99823 * 179.97438 * 12 11 9 15 15 C 1.36223 * 123.49178 * 180.02562 * 14 12 11 16 16 Cl 1.73607 * 124.60579 * 359.97438 * 15 14 12 17 17 S 1.70448 * 110.79157 * 179.97438 * 15 14 12 18 18 C 1.75498 * 92.46358 * 0.02562 * 17 15 14 19 19 C 1.50701 * 124.68420 * 179.97438 * 18 17 15 20 20 O 1.42897 * 109.46996 * 244.97555 * 19 18 17 21 21 Si 1.86303 * 109.46925 * 4.97636 * 19 18 17 22 22 C 1.32698 * 110.62668 * 359.73684 * 18 17 15 23 23 C 1.53777 * 87.08269 * 334.57193 * 9 8 6 24 24 H 1.09002 * 109.47401 * 300.00403 * 1 2 3 25 25 H 1.09001 * 109.46874 * 180.02562 * 1 2 3 26 26 H 1.09004 * 109.46970 * 60.00549 * 1 2 3 27 27 H 1.09004 * 109.47041 * 60.00089 * 4 2 1 28 28 H 1.09000 * 109.47037 * 180.02562 * 4 2 1 29 29 H 1.09001 * 109.47271 * 299.99936 * 4 2 1 30 30 H 1.09002 * 109.47040 * 55.00535 * 5 2 1 31 31 H 1.09002 * 109.46655 * 175.00055 * 5 2 1 32 32 H 1.09000 * 113.61772 * 254.53274 * 8 6 5 33 33 H 1.09001 * 113.61799 * 25.35240 * 8 6 5 34 34 H 0.96999 * 120.00093 * 334.99614 * 11 9 8 35 35 H 1.08998 * 109.46727 * 124.97719 * 19 18 17 36 36 H 0.96706 * 113.99850 * 180.02562 * 20 19 18 37 37 H 1.48506 * 109.99698 * 178.67490 * 21 19 18 38 38 H 1.48491 * 110.00146 * 299.99733 * 21 19 18 39 39 H 1.08000 * 123.44777 * 180.26652 * 22 18 17 40 40 H 1.09003 * 113.60958 * 270.88180 * 23 9 8 41 41 H 1.08992 * 113.61834 * 139.98206 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6926 -1.1993 5 6 1.9586 -0.6924 1.1996 6 6 1.5539 0.0979 2.4455 7 1 0.5236 0.4519 2.4061 8 6 1.9134 -0.6055 3.7649 9 6 2.3144 0.7785 4.3022 10 1 3.2168 0.7650 4.9134 11 7 1.2098 1.5060 4.9322 12 6 1.4664 2.4478 5.8615 13 8 2.6152 2.6936 6.1774 14 6 0.3577 3.1784 6.4934 15 6 0.5352 4.1430 7.4387 16 17 2.0787 4.6591 8.0431 17 16 -0.9639 4.7746 7.9476 18 6 -1.8602 3.7206 6.8679 19 6 -3.3619 3.6968 6.7439 20 8 -3.8565 2.4316 7.1873 21 14 -4.0932 5.0517 7.7928 22 6 -1.0327 2.9511 6.1723 23 6 2.5662 1.1859 2.8409 24 1 -0.3634 0.5139 0.8899 25 1 -0.3633 -1.0277 0.0005 26 1 -0.3633 0.5138 -0.8901 27 1 1.5954 -0.1788 -2.0894 28 1 3.0487 -0.6930 -1.1990 29 1 1.5954 -1.7203 -1.1992 30 1 1.5240 -1.6909 1.2455 31 1 3.0449 -0.7706 1.1559 32 1 1.0545 -1.0403 4.2761 33 1 2.7491 -1.2997 3.6760 34 1 0.2938 1.3099 4.6805 35 1 -3.6429 3.8519 5.7022 36 1 -4.8182 2.3449 7.1349 37 1 -5.5718 5.0593 7.6542 38 1 -3.7174 4.8517 9.2153 39 1 -1.3645 2.2272 5.4427 40 1 3.5813 0.9825 2.4996 41 1 2.2344 2.1972 2.6061 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13431040.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:14 Heat of formation + Delta-G solvation = 99.110096 kcal Electronic energy + Delta-G solvation = -24102.550676 eV Core-core repulsion = 20449.389166 eV Total energy + Delta-G solvation = -3653.161510 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.087 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -42.21594 -41.14133 -39.47215 -38.66022 -37.99225 -37.12878 -34.49555 -31.85669 -30.15817 -29.35872 -27.00505 -26.83292 -26.40401 -25.39498 -23.56080 -22.22045 -20.86508 -20.43149 -19.43391 -19.17152 -18.59747 -17.93192 -17.64880 -17.32424 -16.91114 -16.47479 -16.30460 -16.01283 -15.48397 -15.23274 -15.04885 -14.57078 -14.51783 -14.36514 -14.05914 -13.97314 -13.73067 -13.51465 -13.45602 -13.21182 -13.12334 -13.09904 -12.81929 -12.64643 -12.48407 -12.13084 -12.07873 -11.98639 -11.67233 -11.32903 -11.00625 -10.62853 -10.21467 -9.90367 -9.72533 -5.09943 -0.66251 -0.23246 0.46983 0.69284 0.99598 1.05417 1.16026 1.47913 1.87654 2.05513 2.13477 2.93558 2.98522 3.14717 3.19981 3.41894 3.46542 3.51870 3.76592 3.79910 3.83900 3.90959 3.91629 4.21115 4.28875 4.31969 4.39904 4.41991 4.47440 4.53543 4.68188 4.73051 4.76666 4.78473 4.85572 4.86857 4.89775 4.95735 4.98905 5.05464 5.17203 5.54440 6.40783 6.52258 7.12614 Molecular weight = 332.09amu Principal moments of inertia in cm(-1) A = 0.012637 B = 0.003519 C = 0.002901 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2215.142604 B = 7955.683539 C = 9648.640264 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.372 5.372 3 H 0.436 0.564 4 C -0.047 4.047 5 C 0.009 3.991 6 C -0.119 4.119 7 H 0.134 0.866 8 C -0.127 4.127 9 C 0.091 3.909 10 H 0.068 0.932 11 N -0.689 5.689 12 C 0.574 3.426 13 O -0.560 6.560 14 C -0.165 4.165 15 C -0.142 4.142 16 Cl 0.000 7.000 17 S 0.234 5.766 18 C -0.188 4.188 19 C -0.016 4.016 20 O -0.549 6.549 21 Si 0.675 3.325 22 C -0.060 4.060 23 C -0.150 4.150 24 H 0.124 0.876 25 H 0.122 0.878 26 H 0.126 0.874 27 H 0.125 0.875 28 H 0.122 0.878 29 H 0.120 0.880 30 H 0.143 0.857 31 H 0.140 0.860 32 H 0.084 0.916 33 H 0.111 0.889 34 H 0.417 0.583 35 H 0.136 0.864 36 H 0.403 0.597 37 H -0.254 1.254 38 H -0.286 1.286 39 H 0.196 0.804 40 H 0.109 0.891 41 H 0.078 0.922 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.817 -13.395 -30.629 33.440 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.052 4.948 3 H 0.272 0.728 4 C -0.189 4.189 5 C -0.113 4.113 6 C -0.137 4.137 7 H 0.151 0.849 8 C -0.165 4.165 9 C -0.014 4.014 10 H 0.087 0.913 11 N -0.342 5.342 12 C 0.360 3.640 13 O -0.439 6.439 14 C -0.185 4.185 15 C -0.289 4.289 16 Cl 0.029 6.971 17 S 0.500 5.500 18 C -0.306 4.306 19 C -0.129 4.129 20 O -0.360 6.360 21 Si 0.579 3.421 22 C -0.088 4.088 23 C -0.188 4.188 24 H 0.142 0.858 25 H 0.141 0.859 26 H 0.144 0.856 27 H 0.143 0.857 28 H 0.141 0.859 29 H 0.139 0.861 30 H 0.161 0.839 31 H 0.158 0.842 32 H 0.103 0.897 33 H 0.129 0.871 34 H 0.255 0.745 35 H 0.153 0.847 36 H 0.255 0.745 37 H -0.179 1.179 38 H -0.213 1.213 39 H 0.213 0.787 40 H 0.127 0.873 41 H 0.097 0.903 Dipole moment (debyes) X Y Z Total from point charges -0.299 -12.229 -28.561 31.070 hybrid contribution -0.105 -1.318 -0.030 1.322 sum -0.404 -13.547 -28.590 31.640 Atomic orbital electron populations 1.24223 0.76154 1.09739 1.09601 1.44805 1.16025 1.19423 1.14552 0.72761 1.24123 1.05655 1.02424 0.86658 1.23911 1.05792 0.99684 0.81956 1.23076 1.01644 0.96028 0.92996 0.84875 1.23284 1.03687 0.94703 0.94876 1.22030 0.90218 0.94181 0.94964 0.91348 1.45256 1.10874 1.37753 1.40301 1.17571 0.87113 0.79959 0.79373 1.90896 1.22999 1.66541 1.63440 1.20398 0.95459 1.00997 1.01598 1.25802 0.95445 1.03888 1.03767 1.98437 1.24234 1.88806 1.85655 1.83736 0.90697 1.36908 1.38648 1.23751 0.99186 1.04430 1.03184 1.23825 0.89649 0.92793 1.06636 1.86545 1.29089 1.31938 1.88424 0.94817 0.83169 0.84579 0.79492 1.21161 0.87327 0.99507 1.00815 1.23661 1.01093 0.99920 0.94131 0.85764 0.85903 0.85597 0.85690 0.85917 0.86093 0.83853 0.84233 0.89734 0.87057 0.74478 0.84700 0.74500 1.17861 1.21285 0.78666 0.87258 0.90342 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.58 8.98 127.69 1.15 4.72 16 2 N -0.37 24.80 0.66 -948.84 -0.62 24.18 16 3 H 0.44 -30.08 8.44 -89.69 -0.76 -30.84 16 4 C -0.05 3.00 9.19 127.69 1.17 4.17 16 5 C 0.01 -0.53 4.48 86.30 0.39 -0.14 16 6 C -0.12 6.42 3.45 -10.27 -0.04 6.38 16 7 H 0.13 -7.70 6.10 -2.38 -0.01 -7.72 16 8 C -0.13 5.52 7.39 31.12 0.23 5.75 16 9 C 0.09 -3.08 4.32 45.52 0.20 -2.88 16 10 H 0.07 -1.63 7.46 -2.39 -0.02 -1.65 16 11 N -0.69 20.76 5.24 -443.65 -2.33 18.43 16 12 C 0.57 -10.10 7.79 86.56 0.67 -9.43 16 13 O -0.56 4.34 14.51 -4.20 -0.06 4.28 16 14 C -0.16 2.87 5.98 -19.84 -0.12 2.76 16 15 C -0.14 1.74 6.87 67.35 0.46 2.21 16 16 Cl 0.00 0.00 27.20 -2.72 -0.07 -0.07 16 17 S 0.23 -3.65 20.19 -56.49 -1.14 -4.79 16 18 C -0.19 3.98 5.68 24.51 0.14 4.12 16 19 C -0.02 0.39 2.93 71.24 0.21 0.59 16 20 O -0.55 12.15 12.86 -148.98 -1.92 10.24 16 21 Si 0.68 -13.12 30.92 68.60 2.12 -11.00 16 22 C -0.06 1.46 9.75 22.69 0.22 1.68 16 23 C -0.15 6.61 7.43 31.12 0.23 6.84 16 24 H 0.12 -8.05 6.10 -2.39 -0.01 -8.06 16 25 H 0.12 -7.86 8.11 -2.39 -0.02 -7.88 16 26 H 0.13 -8.09 8.14 -2.38 -0.02 -8.11 16 27 H 0.12 -7.94 8.14 -2.38 -0.02 -7.96 16 28 H 0.12 -7.78 8.11 -2.39 -0.02 -7.80 16 29 H 0.12 -7.66 8.14 -2.39 -0.02 -7.67 16 30 H 0.14 -9.05 8.09 -2.39 -0.02 -9.07 16 31 H 0.14 -8.69 7.79 -2.39 -0.02 -8.71 16 32 H 0.08 -3.52 8.14 -2.39 -0.02 -3.54 16 33 H 0.11 -4.88 8.10 -2.39 -0.02 -4.90 16 34 H 0.42 -15.78 7.24 -92.71 -0.67 -16.46 16 35 H 0.14 -4.35 7.96 -2.39 -0.02 -4.37 16 36 H 0.40 -11.78 8.74 -74.05 -0.65 -12.42 16 37 H -0.25 3.98 7.11 99.48 0.71 4.68 16 38 H -0.29 2.91 7.11 99.48 0.71 3.62 16 39 H 0.20 -6.67 7.10 -2.91 -0.02 -6.69 16 40 H 0.11 -4.95 7.90 -2.39 -0.02 -4.97 16 41 H 0.08 -3.29 8.14 -2.39 -0.02 -3.31 16 Total: 1.00 -85.73 357.99 -0.06 -85.80 By element: Atomic # 1 Polarization: -152.87 SS G_CDS: -0.96 Total: -153.84 kcal Atomic # 6 Polarization: 21.86 SS G_CDS: 4.92 Total: 26.77 kcal Atomic # 7 Polarization: 45.56 SS G_CDS: -2.95 Total: 42.61 kcal Atomic # 8 Polarization: 16.49 SS G_CDS: -1.98 Total: 14.51 kcal Atomic # 14 Polarization: -13.12 SS G_CDS: 2.12 Total: -11.00 kcal Atomic # 16 Polarization: -3.65 SS G_CDS: -1.14 Total: -4.79 kcal Atomic # 17 Polarization: 0.00 SS G_CDS: -0.07 Total: -0.07 kcal Total: -85.73 -0.06 -85.80 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13431040.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 184.906 kcal (2) G-P(sol) polarization free energy of solvation -85.733 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 99.173 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.063 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.795 kcal (6) G-S(sol) free energy of system = (1) + (5) 99.110 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds