Wall clock time and date at job start Sun Mar 7 2021 06:32:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00892 * 109.46697 * 2 1 4 4 C 1.46899 * 109.46881 * 120.00417 * 2 1 3 5 5 C 1.46904 * 109.46774 * 240.00260 * 2 1 3 6 6 C 1.52994 * 109.47119 * 65.00007 * 5 2 1 7 7 H 1.09002 * 112.90771 * 316.24725 * 6 5 2 8 8 C 1.53779 * 113.61529 * 87.50129 * 6 5 2 9 9 C 1.53779 * 87.08402 * 139.98073 * 8 6 5 10 10 H 1.08997 * 113.61646 * 220.02209 * 9 8 6 11 11 N 1.46497 * 113.69123 * 89.12592 * 9 8 6 12 12 C 1.34780 * 119.99769 * 107.46801 * 11 9 8 13 13 O 1.21614 * 120.00268 * 0.02562 * 12 11 9 14 14 C 1.47380 * 119.99945 * 179.97438 * 12 11 9 15 15 C 1.36420 * 127.19066 * 359.68757 * 14 12 11 16 16 O 1.33647 * 108.39813 * 179.89142 * 15 14 12 17 17 C 1.34215 * 110.90509 * 0.38591 * 16 15 14 18 18 C 1.50707 * 125.43705 * 179.75884 * 17 16 15 19 19 O 1.42902 * 109.46827 * 120.00054 * 18 17 16 20 20 Si 1.86301 * 109.47120 * 0.02562 * 18 17 16 21 21 C 1.34177 * 109.12587 * 359.76224 * 17 16 15 22 22 C 1.53784 * 113.61233 * 184.99717 * 6 5 2 23 23 H 1.09004 * 109.47175 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.47141 * 299.99692 * 1 2 3 25 25 H 1.08996 * 109.47385 * 59.99667 * 1 2 3 26 26 H 1.09004 * 109.46646 * 180.02562 * 4 2 1 27 27 H 1.09003 * 109.46788 * 299.99479 * 4 2 1 28 28 H 1.08993 * 109.47586 * 60.00370 * 4 2 1 29 29 H 1.08994 * 109.46849 * 304.99700 * 5 2 1 30 30 H 1.09001 * 109.46527 * 185.00196 * 5 2 1 31 31 H 1.09006 * 113.61307 * 25.43275 * 8 6 5 32 32 H 1.08999 * 113.69146 * 254.53761 * 8 6 5 33 33 H 0.96998 * 120.00318 * 287.46338 * 11 9 8 34 34 H 1.08003 * 125.80323 * 0.02562 * 15 14 12 35 35 H 1.08994 * 109.47316 * 240.00129 * 18 17 16 36 36 H 0.96697 * 114.00188 * 299.99963 * 19 18 17 37 37 H 1.48500 * 110.00316 * 58.67352 * 20 18 17 38 38 H 1.48498 * 109.99879 * 179.97438 * 20 18 17 39 39 H 1.08005 * 127.01824 * 180.02562 * 21 17 16 40 40 H 1.09004 * 113.61451 * 105.47254 * 22 6 5 41 41 H 1.08994 * 113.61477 * 334.56556 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9586 -0.6925 -1.1995 6 6 1.5539 0.0977 -2.4455 7 1 0.5241 0.4529 -2.4067 8 6 2.5662 1.1856 -2.8409 9 6 2.3144 0.7783 -4.3022 10 1 3.2168 0.7647 -4.9134 11 7 1.2103 1.5050 -4.9339 12 6 1.4677 2.4466 -5.8633 13 8 2.6164 2.6926 -6.1778 14 6 0.3570 3.1772 -6.4993 15 6 -0.9773 3.0163 -6.2648 16 8 -1.6483 3.8709 -7.0429 17 6 -0.8063 4.5939 -7.7977 18 6 -1.2126 5.6489 -8.7943 19 8 -0.6393 6.9033 -8.4203 20 14 -3.0694 5.7979 -8.8186 21 6 0.4550 4.2274 -7.5234 22 6 1.9135 -0.6057 -3.7649 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 3.0487 -0.6922 1.1996 27 1 1.5953 -0.1787 2.0894 28 1 1.5954 -1.7202 1.1993 29 1 1.5240 -1.6910 -1.2454 30 1 3.0450 -0.7707 -1.1558 31 1 3.5813 0.9822 -2.4996 32 1 2.2357 2.1975 -2.6065 33 1 0.2941 1.3084 -4.6834 34 1 -1.4165 2.3186 -5.5672 35 1 -0.8573 5.3682 -9.7857 36 1 -0.9123 7.2157 -7.5468 37 1 -3.5686 6.1493 -7.4649 38 1 -3.4829 6.8356 -9.7971 39 1 1.3578 4.6233 -7.9646 40 1 1.0546 -1.0405 -4.2761 41 1 2.7501 -1.2988 -3.6762 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:18 Heat of formation + Delta-G solvation = 112.964289 kcal Electronic energy + Delta-G solvation = -22174.832588 eV Core-core repulsion = 18758.000955 eV Total energy + Delta-G solvation = -3416.831633 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.154 amu Computer time = 0.44 seconds Orbital eigenvalues (eV) -44.64045 -44.53020 -42.30621 -40.41492 -38.87540 -35.96097 -34.74004 -32.87337 -32.09284 -31.92168 -28.78176 -28.25275 -27.55227 -26.51169 -25.30405 -23.18974 -22.42754 -22.15328 -21.66658 -20.39878 -20.09315 -19.70287 -18.75453 -18.49106 -18.39480 -18.28911 -17.52005 -17.39041 -16.99078 -16.74933 -16.48295 -16.34809 -16.26116 -16.02342 -15.79293 -15.76916 -15.46161 -15.26224 -14.92529 -14.76621 -14.70525 -14.45700 -14.05550 -13.64718 -13.44970 -13.13726 -12.74798 -12.16460 -11.79441 -11.53109 -11.44164 -10.68694 -5.65529 -1.52765 -0.73871 0.02553 0.42918 0.43426 0.47426 0.65317 0.66530 0.76363 0.97692 1.22557 1.27136 1.28836 1.30278 1.55274 1.61913 1.67951 1.74106 1.84024 2.02617 2.10147 2.15148 2.17768 2.25844 2.32480 2.36281 2.47544 2.61293 2.92699 2.93450 2.94179 3.06971 3.20831 3.26369 3.37823 3.57380 3.61925 3.74131 3.88059 4.13540 4.37814 4.95359 5.19367 5.52985 6.06604 Molecular weight = 282.15amu Principal moments of inertia in cm(-1) A = 0.027922 B = 0.003352 C = 0.003149 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1002.568320 B = 8351.498643 C = 8888.484305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.052 4.052 2 N -0.387 5.387 3 H 0.427 0.573 4 C -0.048 4.048 5 C 0.000 4.000 6 C -0.151 4.151 7 H 0.112 0.888 8 C -0.158 4.158 9 C 0.126 3.874 10 H 0.116 0.884 11 N -0.719 5.719 12 C 0.594 3.406 13 O -0.518 6.518 14 C -0.242 4.242 15 C 0.032 3.968 16 O -0.162 6.162 17 C -0.047 4.047 18 C -0.038 4.038 19 O -0.517 6.517 20 Si 0.705 3.295 21 C -0.125 4.125 22 C -0.130 4.130 23 H 0.123 0.877 24 H 0.125 0.875 25 H 0.122 0.878 26 H 0.124 0.876 27 H 0.124 0.876 28 H 0.122 0.878 29 H 0.132 0.868 30 H 0.133 0.867 31 H 0.104 0.896 32 H 0.084 0.916 33 H 0.398 0.602 34 H 0.210 0.790 35 H 0.141 0.859 36 H 0.380 0.620 37 H -0.257 1.257 38 H -0.246 1.246 39 H 0.164 0.836 40 H 0.090 0.910 41 H 0.109 0.891 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.393 -15.914 24.630 29.326 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.194 4.194 2 N 0.037 4.963 3 H 0.262 0.738 4 C -0.190 4.190 5 C -0.121 4.121 6 C -0.170 4.170 7 H 0.130 0.870 8 C -0.197 4.197 9 C 0.020 3.980 10 H 0.134 0.866 11 N -0.371 5.371 12 C 0.382 3.618 13 O -0.393 6.393 14 C -0.247 4.247 15 C -0.039 4.039 16 O -0.058 6.058 17 C -0.095 4.095 18 C -0.147 4.147 19 O -0.324 6.324 20 Si 0.603 3.397 21 C -0.144 4.144 22 C -0.168 4.168 23 H 0.142 0.858 24 H 0.143 0.857 25 H 0.140 0.860 26 H 0.142 0.858 27 H 0.143 0.857 28 H 0.141 0.859 29 H 0.150 0.850 30 H 0.151 0.849 31 H 0.122 0.878 32 H 0.102 0.898 33 H 0.232 0.768 34 H 0.227 0.773 35 H 0.158 0.842 36 H 0.229 0.771 37 H -0.181 1.181 38 H -0.170 1.170 39 H 0.182 0.818 40 H 0.109 0.891 41 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 0.432 -15.462 23.907 28.475 hybrid contribution 0.437 0.707 1.106 1.383 sum 0.869 -14.755 25.013 29.053 Atomic orbital electron populations 1.24179 0.76054 1.09697 1.09441 1.45033 1.16324 1.19141 1.15760 0.73792 1.24151 1.05744 1.02440 0.86637 1.24127 1.05221 0.99899 0.82880 1.23346 1.01676 0.98733 0.93241 0.87020 1.23743 0.99336 0.98789 0.97847 1.21659 0.92174 0.90752 0.93373 0.86583 1.45459 1.09137 1.40073 1.42445 1.17300 0.87968 0.78489 0.78006 1.90873 1.21715 1.64886 1.61858 1.21397 0.92972 1.04741 1.05589 1.24354 0.90206 0.94098 0.95281 1.83723 1.37987 1.41139 1.42909 1.22803 0.88520 0.99337 0.98841 1.24449 1.12894 0.80710 0.96686 1.86718 1.71310 1.34269 1.40061 0.94477 0.72988 0.89812 0.82375 1.22568 0.97934 0.96344 0.97593 1.23340 1.03847 0.96996 0.92638 0.85832 0.85701 0.85980 0.85781 0.85708 0.85906 0.85008 0.84866 0.87806 0.89754 0.76792 0.77325 0.84190 0.77127 1.18096 1.17020 0.81814 0.89121 0.87266 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.67 8.98 60.07 0.54 2.20 16 2 N -0.39 12.84 0.66 -251.26 -0.17 12.67 16 3 H 0.43 -14.62 8.44 -39.30 -0.33 -14.95 16 4 C -0.05 1.54 9.19 60.06 0.55 2.09 16 5 C 0.00 0.00 4.48 -3.82 -0.02 -0.02 16 6 C -0.15 4.11 3.45 -89.81 -0.31 3.80 16 7 H 0.11 -3.19 6.10 -51.93 -0.32 -3.51 16 8 C -0.16 3.63 7.43 -25.92 -0.19 3.44 16 9 C 0.13 -2.35 4.32 -67.12 -0.29 -2.64 16 10 H 0.12 -1.73 7.46 -51.93 -0.39 -2.12 16 11 N -0.72 12.09 5.26 -54.10 -0.28 11.80 16 12 C 0.59 -6.41 7.81 -12.54 -0.10 -6.51 16 13 O -0.52 2.97 16.58 5.27 0.09 3.05 16 14 C -0.24 2.58 6.31 -103.28 -0.65 1.92 16 15 C 0.03 -0.43 11.61 30.08 0.35 -0.08 16 16 O -0.16 1.73 8.89 7.67 0.07 1.80 16 17 C -0.05 0.43 6.20 -35.74 -0.22 0.21 16 18 C -0.04 0.35 2.98 36.01 0.11 0.45 16 19 O -0.52 3.85 12.86 -35.23 -0.45 3.40 16 20 Si 0.70 -6.55 32.08 -169.99 -5.45 -12.00 16 21 C -0.12 1.02 10.88 -37.46 -0.41 0.61 16 22 C -0.13 2.96 7.39 -25.91 -0.19 2.77 16 23 H 0.12 -3.93 8.11 -51.93 -0.42 -4.35 16 24 H 0.12 -3.99 8.14 -51.93 -0.42 -4.42 16 25 H 0.12 -3.90 6.10 -51.93 -0.32 -4.22 16 26 H 0.12 -3.94 8.11 -51.93 -0.42 -4.36 16 27 H 0.12 -3.98 8.14 -51.93 -0.42 -4.40 16 28 H 0.12 -3.89 8.14 -51.93 -0.42 -4.32 16 29 H 0.13 -4.10 8.09 -51.93 -0.42 -4.52 16 30 H 0.13 -4.12 7.79 -51.93 -0.40 -4.53 16 31 H 0.10 -2.43 7.90 -51.93 -0.41 -2.84 16 32 H 0.08 -1.82 8.14 -51.93 -0.42 -2.25 16 33 H 0.40 -8.12 7.67 -40.82 -0.31 -8.43 16 34 H 0.21 -4.01 7.47 -52.48 -0.39 -4.41 16 35 H 0.14 -1.41 7.96 -51.93 -0.41 -1.82 16 36 H 0.38 -4.01 8.70 45.56 0.40 -3.61 16 37 H -0.26 1.83 7.11 56.52 0.40 2.23 16 38 H -0.25 1.41 7.11 56.52 0.40 1.81 16 39 H 0.16 -1.17 8.06 -52.48 -0.42 -1.60 16 40 H 0.09 -1.99 8.14 -51.93 -0.42 -2.42 16 41 H 0.11 -2.51 8.10 -51.93 -0.42 -2.93 16 LS Contribution 338.36 15.07 5.10 5.10 Total: 1.00 -39.63 338.36 -8.24 -47.87 By element: Atomic # 1 Polarization: -75.65 SS G_CDS: -6.31 Total: -81.95 kcal Atomic # 6 Polarization: 9.09 SS G_CDS: -0.83 Total: 8.26 kcal Atomic # 7 Polarization: 24.93 SS G_CDS: -0.45 Total: 24.48 kcal Atomic # 8 Polarization: 8.55 SS G_CDS: -0.30 Total: 8.26 kcal Atomic # 14 Polarization: -6.55 SS G_CDS: -5.45 Total: -12.00 kcal Total LS contribution 5.10 Total: 5.10 kcal Total: -39.63 -8.24 -47.87 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 160.834 kcal (2) G-P(sol) polarization free energy of solvation -39.627 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 121.207 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -8.242 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -47.869 kcal (6) G-S(sol) free energy of system = (1) + (5) 112.964 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds