Wall clock time and date at job start Sun Mar 7 2021 06:32:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00892 * 109.46697 * 2 1 4 4 C 1.46899 * 109.46881 * 120.00417 * 2 1 3 5 5 C 1.46904 * 109.46774 * 240.00260 * 2 1 3 6 6 C 1.52994 * 109.47119 * 65.00007 * 5 2 1 7 7 H 1.09002 * 112.90771 * 316.24725 * 6 5 2 8 8 C 1.53779 * 113.61529 * 87.50129 * 6 5 2 9 9 C 1.53779 * 87.08402 * 139.98073 * 8 6 5 10 10 H 1.08997 * 113.61646 * 220.02209 * 9 8 6 11 11 N 1.46497 * 113.69123 * 89.12592 * 9 8 6 12 12 C 1.34780 * 119.99769 * 107.46801 * 11 9 8 13 13 O 1.21614 * 120.00268 * 0.02562 * 12 11 9 14 14 C 1.47380 * 119.99945 * 179.97438 * 12 11 9 15 15 C 1.36420 * 127.19066 * 359.68757 * 14 12 11 16 16 O 1.33647 * 108.39813 * 179.89142 * 15 14 12 17 17 C 1.34215 * 110.90509 * 0.38591 * 16 15 14 18 18 C 1.50707 * 125.43705 * 179.75884 * 17 16 15 19 19 O 1.42902 * 109.46827 * 120.00054 * 18 17 16 20 20 Si 1.86301 * 109.47120 * 0.02562 * 18 17 16 21 21 C 1.34177 * 109.12587 * 359.76224 * 17 16 15 22 22 C 1.53784 * 113.61233 * 184.99717 * 6 5 2 23 23 H 1.09004 * 109.47175 * 179.97438 * 1 2 3 24 24 H 1.09003 * 109.47141 * 299.99692 * 1 2 3 25 25 H 1.08996 * 109.47385 * 59.99667 * 1 2 3 26 26 H 1.09004 * 109.46646 * 180.02562 * 4 2 1 27 27 H 1.09003 * 109.46788 * 299.99479 * 4 2 1 28 28 H 1.08993 * 109.47586 * 60.00370 * 4 2 1 29 29 H 1.08994 * 109.46849 * 304.99700 * 5 2 1 30 30 H 1.09001 * 109.46527 * 185.00196 * 5 2 1 31 31 H 1.09006 * 113.61307 * 25.43275 * 8 6 5 32 32 H 1.08999 * 113.69146 * 254.53761 * 8 6 5 33 33 H 0.96998 * 120.00318 * 287.46338 * 11 9 8 34 34 H 1.08003 * 125.80323 * 0.02562 * 15 14 12 35 35 H 1.08994 * 109.47316 * 240.00129 * 18 17 16 36 36 H 0.96697 * 114.00188 * 299.99963 * 19 18 17 37 37 H 1.48500 * 110.00316 * 58.67352 * 20 18 17 38 38 H 1.48498 * 109.99879 * 179.97438 * 20 18 17 39 39 H 1.08005 * 127.01824 * 180.02562 * 21 17 16 40 40 H 1.09004 * 113.61451 * 105.47254 * 22 6 5 41 41 H 1.08994 * 113.61477 * 334.56556 * 22 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9586 -0.6925 -1.1995 6 6 1.5539 0.0977 -2.4455 7 1 0.5241 0.4529 -2.4067 8 6 2.5662 1.1856 -2.8409 9 6 2.3144 0.7783 -4.3022 10 1 3.2168 0.7647 -4.9134 11 7 1.2103 1.5050 -4.9339 12 6 1.4677 2.4466 -5.8633 13 8 2.6164 2.6926 -6.1778 14 6 0.3570 3.1772 -6.4993 15 6 -0.9773 3.0163 -6.2648 16 8 -1.6483 3.8709 -7.0429 17 6 -0.8063 4.5939 -7.7977 18 6 -1.2126 5.6489 -8.7943 19 8 -0.6393 6.9033 -8.4203 20 14 -3.0694 5.7979 -8.8186 21 6 0.4550 4.2274 -7.5234 22 6 1.9135 -0.6057 -3.7649 23 1 -0.3634 -1.0277 -0.0005 24 1 -0.3633 0.5138 0.8900 25 1 -0.3634 0.5139 -0.8899 26 1 3.0487 -0.6922 1.1996 27 1 1.5953 -0.1787 2.0894 28 1 1.5954 -1.7202 1.1993 29 1 1.5240 -1.6910 -1.2454 30 1 3.0450 -0.7707 -1.1558 31 1 3.5813 0.9822 -2.4996 32 1 2.2357 2.1975 -2.6065 33 1 0.2941 1.3084 -4.6834 34 1 -1.4165 2.3186 -5.5672 35 1 -0.8573 5.3682 -9.7857 36 1 -0.9123 7.2157 -7.5468 37 1 -3.5686 6.1493 -7.4649 38 1 -3.4829 6.8356 -9.7971 39 1 1.3578 4.6233 -7.9646 40 1 1.0546 -1.0405 -4.2761 41 1 2.7501 -1.2988 -3.6762 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13456056.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:18 Heat of formation + Delta-G solvation = 82.991983 kcal Electronic energy + Delta-G solvation = -22176.132285 eV Core-core repulsion = 18758.000955 eV Total energy + Delta-G solvation = -3418.131330 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 282.154 amu Computer time = 0.45 seconds Orbital eigenvalues (eV) -43.76108 -42.20472 -40.83239 -39.03777 -38.22383 -34.83795 -33.79394 -31.86200 -30.06092 -29.36905 -26.89655 -26.83189 -26.01765 -25.04416 -23.54164 -22.38358 -21.22903 -20.50806 -19.45212 -19.22584 -17.91769 -17.77402 -17.60806 -17.49728 -17.08662 -16.94360 -16.25868 -16.12501 -15.73885 -15.52560 -15.10258 -14.76327 -14.26303 -14.05743 -14.03217 -13.75472 -13.62168 -13.52297 -13.47461 -13.22827 -13.12595 -13.00039 -12.84705 -12.19445 -12.03941 -11.71180 -11.35839 -11.32914 -11.03749 -10.82184 -10.21797 -9.81742 -4.95772 0.22933 0.75882 1.03977 1.14461 1.50329 1.69062 1.92903 1.97490 2.18390 2.92142 2.97073 3.16828 3.17955 3.39946 3.43521 3.44448 3.50368 3.74775 3.78972 3.89668 3.93700 4.19952 4.27298 4.29450 4.38319 4.39697 4.45436 4.46790 4.52067 4.66717 4.74295 4.76875 4.82452 4.85435 4.87202 4.88547 4.95806 5.02949 5.08271 5.14863 5.50832 5.80313 6.31161 6.41276 7.11666 Molecular weight = 282.15amu Principal moments of inertia in cm(-1) A = 0.027922 B = 0.003352 C = 0.003149 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1002.568320 B = 8351.498643 C = 8888.484305 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.055 4.055 2 N -0.373 5.373 3 H 0.435 0.565 4 C -0.047 4.047 5 C 0.008 3.992 6 C -0.118 4.118 7 H 0.136 0.864 8 C -0.153 4.153 9 C 0.089 3.911 10 H 0.064 0.936 11 N -0.689 5.689 12 C 0.589 3.411 13 O -0.589 6.589 14 C -0.272 4.272 15 C 0.072 3.928 16 O -0.165 6.165 17 C -0.048 4.048 18 C -0.048 4.048 19 O -0.540 6.540 20 Si 0.792 3.208 21 C -0.157 4.157 22 C -0.124 4.124 23 H 0.124 0.876 24 H 0.124 0.876 25 H 0.125 0.875 26 H 0.122 0.878 27 H 0.124 0.876 28 H 0.122 0.878 29 H 0.146 0.854 30 H 0.138 0.862 31 H 0.108 0.892 32 H 0.075 0.925 33 H 0.419 0.581 34 H 0.273 0.727 35 H 0.143 0.857 36 H 0.391 0.609 37 H -0.280 1.280 38 H -0.298 1.298 39 H 0.137 0.863 40 H 0.090 0.910 41 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.559 -18.069 27.520 32.959 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.197 4.197 2 N 0.051 4.949 3 H 0.271 0.729 4 C -0.189 4.189 5 C -0.114 4.114 6 C -0.136 4.136 7 H 0.154 0.846 8 C -0.191 4.191 9 C -0.016 4.016 10 H 0.083 0.917 11 N -0.342 5.342 12 C 0.378 3.622 13 O -0.470 6.470 14 C -0.277 4.277 15 C 0.002 3.998 16 O -0.060 6.060 17 C -0.097 4.097 18 C -0.156 4.156 19 O -0.349 6.349 20 Si 0.695 3.305 21 C -0.177 4.177 22 C -0.162 4.162 23 H 0.143 0.857 24 H 0.142 0.858 25 H 0.143 0.857 26 H 0.140 0.860 27 H 0.142 0.858 28 H 0.140 0.860 29 H 0.164 0.836 30 H 0.156 0.844 31 H 0.126 0.874 32 H 0.094 0.906 33 H 0.258 0.742 34 H 0.288 0.712 35 H 0.161 0.839 36 H 0.241 0.759 37 H -0.206 1.206 38 H -0.226 1.226 39 H 0.155 0.845 40 H 0.108 0.892 41 H 0.129 0.871 Dipole moment (debyes) X Y Z Total from point charges -1.545 -17.663 26.851 32.177 hybrid contribution 1.070 1.374 0.213 1.754 sum -0.475 -16.290 27.064 31.592 Atomic orbital electron populations 1.24229 0.76097 1.09830 1.09575 1.44814 1.16069 1.19381 1.14602 0.72865 1.24121 1.05629 1.02463 0.86648 1.23923 1.05773 0.99782 0.81921 1.23083 1.01607 0.95869 0.93080 0.84626 1.23680 1.01215 0.99933 0.94305 1.22040 0.90278 0.94486 0.94823 0.91710 1.45203 1.10886 1.37815 1.40280 1.17468 0.86926 0.79200 0.78645 1.90831 1.24147 1.67433 1.64558 1.21471 0.94631 1.05288 1.06283 1.25434 0.88793 0.92255 0.93340 1.83727 1.37803 1.41444 1.43055 1.22545 0.88223 0.99645 0.99263 1.24654 1.13441 0.80363 0.97122 1.86676 1.72012 1.35175 1.41035 0.93531 0.70926 0.87543 0.78507 1.22565 0.97624 0.98141 0.99335 1.23278 1.03863 0.94423 0.94665 0.85743 0.85752 0.85679 0.85976 0.85778 0.85979 0.83621 0.84356 0.87412 0.90592 0.74244 0.71174 0.83906 0.75913 1.20563 1.22598 0.84526 0.89153 0.87108 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.63 8.98 127.69 1.15 4.77 16 2 N -0.37 25.03 0.66 -948.84 -0.62 24.41 16 3 H 0.44 -30.12 8.44 -89.70 -0.76 -30.88 16 4 C -0.05 3.01 9.19 127.69 1.17 4.19 16 5 C 0.01 -0.50 4.48 86.30 0.39 -0.11 16 6 C -0.12 6.50 3.45 -10.27 -0.04 6.47 16 7 H 0.14 -8.08 6.10 -2.39 -0.01 -8.10 16 8 C -0.15 6.82 7.43 31.12 0.23 7.05 16 9 C 0.09 -3.08 4.32 45.52 0.20 -2.88 16 10 H 0.06 -1.55 7.46 -2.39 -0.02 -1.57 16 11 N -0.69 22.08 5.26 -443.34 -2.33 19.75 16 12 C 0.59 -10.71 7.81 86.65 0.68 -10.03 16 13 O -0.59 3.32 16.58 -4.07 -0.07 3.26 16 14 C -0.27 5.19 6.31 -18.99 -0.12 5.07 16 15 C 0.07 -2.01 11.61 67.40 0.78 -1.23 16 16 O -0.16 3.53 8.89 4.52 0.04 3.57 16 17 C -0.05 0.78 6.20 24.76 0.15 0.94 16 18 C -0.05 0.75 2.98 71.24 0.21 0.96 16 19 O -0.54 6.42 12.86 -148.98 -1.92 4.51 16 20 Si 0.79 -13.51 32.08 68.60 2.20 -11.30 16 21 C -0.16 1.95 10.88 23.64 0.26 2.21 16 22 C -0.12 5.58 7.39 31.12 0.23 5.81 16 23 H 0.12 -8.08 8.11 -2.38 -0.02 -8.10 16 24 H 0.12 -8.03 8.14 -2.39 -0.02 -8.05 16 25 H 0.12 -8.23 6.10 -2.39 -0.01 -8.24 16 26 H 0.12 -7.76 8.11 -2.38 -0.02 -7.78 16 27 H 0.12 -7.91 8.14 -2.39 -0.02 -7.92 16 28 H 0.12 -7.79 8.14 -2.39 -0.02 -7.81 16 29 H 0.15 -9.36 8.09 -2.39 -0.02 -9.38 16 30 H 0.14 -8.69 7.79 -2.39 -0.02 -8.71 16 31 H 0.11 -4.88 7.90 -2.38 -0.02 -4.90 16 32 H 0.08 -3.19 8.14 -2.39 -0.02 -3.21 16 33 H 0.42 -17.46 7.67 -92.71 -0.71 -18.17 16 34 H 0.27 -11.48 7.47 -2.91 -0.02 -11.50 16 35 H 0.14 -2.46 7.96 -2.39 -0.02 -2.48 16 36 H 0.39 -7.15 8.70 -74.06 -0.64 -7.79 16 37 H -0.28 3.73 7.11 99.48 0.71 4.44 16 38 H -0.30 2.55 7.11 99.48 0.71 3.25 16 39 H 0.14 -1.09 8.06 -2.91 -0.02 -1.11 16 40 H 0.09 -4.00 8.14 -2.39 -0.02 -4.02 16 41 H 0.11 -4.99 8.10 -2.39 -0.02 -5.01 16 Total: 1.00 -91.23 338.36 1.57 -89.65 By element: Atomic # 1 Polarization: -156.03 SS G_CDS: -1.02 Total: -157.05 kcal Atomic # 6 Polarization: 17.92 SS G_CDS: 5.29 Total: 23.21 kcal Atomic # 7 Polarization: 47.11 SS G_CDS: -2.96 Total: 44.16 kcal Atomic # 8 Polarization: 13.28 SS G_CDS: -1.94 Total: 11.33 kcal Atomic # 14 Polarization: -13.51 SS G_CDS: 2.20 Total: -11.30 kcal Total: -91.23 1.57 -89.65 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13456056.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 172.646 kcal (2) G-P(sol) polarization free energy of solvation -91.225 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 81.421 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.571 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -89.654 kcal (6) G-S(sol) free energy of system = (1) + (5) 82.992 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.45 seconds