Wall clock time and date at job start Sun Mar 7 2021 06:32:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50695 * 1 3 3 C 1.37870 * 126.45777 * 2 1 4 4 C 1.46682 * 126.23018 * 359.97438 * 3 2 1 5 5 O 1.21690 * 120.00337 * 359.71606 * 4 3 2 6 6 N 1.34784 * 119.99794 * 179.71702 * 4 3 2 7 7 C 1.46494 * 119.99635 * 180.02562 * 6 4 3 8 8 H 1.09005 * 112.85456 * 336.19315 * 7 6 4 9 9 C 1.53780 * 113.61660 * 107.50699 * 7 6 4 10 10 C 1.53774 * 87.08267 * 89.11129 * 9 7 6 11 11 H 1.09000 * 113.61600 * 270.88639 * 10 9 7 12 12 C 1.52998 * 113.69022 * 139.99342 * 10 9 7 13 13 N 1.46903 * 109.46957 * 87.46579 * 12 10 9 14 14 H 1.00895 * 109.47194 * 55.00237 * 13 12 10 15 15 C 1.46904 * 109.47300 * 175.00075 * 13 12 10 16 16 C 1.46900 * 109.47213 * 294.99703 * 13 12 10 17 17 C 1.53782 * 87.08386 * 25.43475 * 10 9 7 18 18 N 1.37651 * 107.53734 * 179.73532 * 3 2 1 19 19 C 1.35532 * 108.64226 * 0.26294 * 18 3 2 20 20 C 1.50700 * 125.56751 * 180.02562 * 19 18 3 21 21 O 1.42902 * 109.46645 * 299.99824 * 20 19 18 22 22 Si 1.86294 * 109.47484 * 179.97438 * 20 19 18 23 23 C 1.35460 * 108.87104 * 359.97438 * 19 18 3 24 24 H 1.08998 * 109.47191 * 90.00342 * 1 2 3 25 25 H 1.09009 * 109.47076 * 210.00172 * 1 2 3 26 26 H 1.08996 * 109.47517 * 330.00069 * 1 2 3 27 27 H 0.96995 * 120.00015 * 359.72613 * 6 4 3 28 28 H 1.08997 * 113.61467 * 203.66565 * 9 7 6 29 29 H 1.09000 * 113.60965 * 334.56513 * 9 7 6 30 30 H 1.08995 * 109.47614 * 207.46218 * 12 10 9 31 31 H 1.08997 * 109.47572 * 327.46747 * 12 10 9 32 32 H 1.09007 * 109.46868 * 59.99885 * 15 13 12 33 33 H 1.08997 * 109.47395 * 179.97438 * 15 13 12 34 34 H 1.08999 * 109.47127 * 300.00489 * 15 13 12 35 35 H 1.09004 * 109.46907 * 60.00356 * 16 13 12 36 36 H 1.09001 * 109.47295 * 179.97438 * 16 13 12 37 37 H 1.08997 * 109.47424 * 300.00398 * 16 13 12 38 38 H 1.09000 * 113.61415 * 220.01821 * 17 10 9 39 39 H 1.09000 * 113.68771 * 89.11987 * 17 10 9 40 40 H 0.97000 * 125.67749 * 180.23918 * 18 3 2 41 41 H 1.08997 * 109.47059 * 59.99267 * 20 19 18 42 42 H 0.96700 * 114.00077 * 299.99028 * 21 20 19 43 43 H 1.48501 * 110.00141 * 58.67675 * 22 20 19 44 44 H 1.48500 * 110.00132 * 179.97438 * 22 20 19 45 45 H 1.07996 * 126.06549 * 180.02562 * 23 19 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.3262 1.1089 0.0000 4 6 1.8897 2.5093 -0.0005 5 8 0.7026 2.7766 -0.0062 6 7 2.8036 3.5000 0.0053 7 6 2.3676 4.8985 0.0053 8 1 1.3662 5.0298 -0.4047 9 6 2.5825 5.6108 1.3512 10 6 3.9811 5.9911 0.8372 11 1 4.7465 5.2491 1.0646 12 6 4.4052 7.4143 1.2051 13 7 5.0473 7.4077 2.5264 14 1 5.8106 6.7478 2.5261 15 6 5.5611 8.7505 2.8279 16 6 4.0643 7.0192 3.5466 17 6 3.4063 5.8675 -0.5839 18 7 3.6283 0.6625 0.0061 19 6 3.6218 -0.6928 0.0039 20 6 4.8433 -1.5753 0.0094 21 8 5.6304 -1.3062 -1.1526 22 14 4.3183 -3.3627 0.0043 23 6 2.3379 -1.1247 -0.0029 24 1 -0.3633 -0.0001 -1.0276 25 1 -0.3634 -0.8900 0.5139 26 1 -0.3634 0.8899 0.5138 27 1 3.7498 3.2869 0.0139 28 1 1.9250 6.4669 1.5020 29 1 2.6005 4.9339 2.2054 30 1 5.1089 7.7875 0.4612 31 1 3.5274 8.0599 1.2310 32 1 4.7365 9.4634 2.8281 33 1 6.0371 8.7458 3.8084 34 1 6.2904 9.0389 2.0709 35 1 3.6831 6.0228 3.3229 36 1 4.5408 7.0139 4.5269 37 1 3.2398 7.7321 3.5468 38 1 4.0893 5.3980 -1.2918 39 1 2.9738 6.7933 -0.9633 40 1 4.4190 1.2245 0.0107 41 1 5.4338 -1.3728 0.9029 42 1 5.1675 -1.4651 -1.9867 43 1 3.4855 -3.6441 -1.1926 44 1 5.5140 -4.2433 0.0091 45 1 2.0137 -2.1548 -0.0057 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_13940406.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:22 Heat of formation + Delta-G solvation = 104.218316 kcal Electronic energy + Delta-G solvation = -24355.780668 eV Core-core repulsion = 20880.750824 eV Total energy + Delta-G solvation = -3475.029844 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -42.70992 -42.22426 -40.64768 -39.01325 -37.88245 -34.86735 -33.48550 -31.77059 -30.15235 -29.52429 -28.26178 -27.11797 -26.72579 -25.74648 -23.97586 -22.91009 -21.68117 -20.81387 -20.39024 -19.63697 -19.08976 -18.24505 -17.84671 -17.41055 -16.93018 -16.78268 -16.43674 -16.13605 -15.66166 -15.46882 -15.20375 -14.99527 -14.66319 -14.37476 -14.09234 -13.89731 -13.77796 -13.64796 -13.62780 -13.58282 -13.54161 -13.31431 -13.09565 -13.04413 -12.78076 -12.35004 -12.18454 -11.92834 -11.72489 -11.40671 -11.24968 -10.89267 -10.28187 -9.87370 -9.24702 -4.89375 0.23146 1.01525 1.16686 1.47962 1.63937 1.83393 1.94009 2.17041 2.18684 2.85512 2.93616 3.17435 3.29305 3.31623 3.42930 3.51099 3.67501 3.73986 3.79659 3.98137 4.08470 4.16081 4.18524 4.19315 4.31418 4.38831 4.45896 4.49799 4.66401 4.67518 4.68615 4.73554 4.75565 4.78074 4.81573 4.83902 4.86523 4.89557 4.98850 5.06945 5.11557 5.27785 5.45660 5.57405 5.77672 6.24949 6.33312 6.43938 7.02631 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.018443 B = 0.003637 C = 0.003265 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1517.860544 B = 7695.779789 C = 8573.894679 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.092 4.092 2 C -0.090 4.090 3 C -0.066 4.066 4 C 0.591 3.409 5 O -0.561 6.561 6 N -0.699 5.699 7 C 0.091 3.909 8 H 0.072 0.928 9 C -0.150 4.150 10 C -0.118 4.118 11 H 0.129 0.871 12 C 0.009 3.991 13 N -0.368 5.368 14 H 0.438 0.562 15 C -0.047 4.047 16 C -0.057 4.057 17 C -0.127 4.127 18 N -0.507 5.507 19 C 0.041 3.959 20 C -0.048 4.048 21 O -0.546 6.546 22 Si 0.775 3.225 23 C -0.213 4.213 24 H 0.060 0.940 25 H 0.076 0.924 26 H 0.065 0.935 27 H 0.410 0.590 28 H 0.112 0.888 29 H 0.080 0.920 30 H 0.149 0.851 31 H 0.136 0.864 32 H 0.117 0.883 33 H 0.124 0.876 34 H 0.127 0.873 35 H 0.115 0.885 36 H 0.127 0.873 37 H 0.120 0.880 38 H 0.081 0.919 39 H 0.113 0.887 40 H 0.431 0.569 41 H 0.144 0.856 42 H 0.390 0.610 43 H -0.291 1.291 44 H -0.302 1.302 45 H 0.157 0.843 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 11.938 24.948 11.480 29.945 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.150 4.150 2 C -0.099 4.099 3 C -0.179 4.179 4 C 0.380 3.620 5 O -0.439 6.439 6 N -0.351 5.351 7 C -0.014 4.014 8 H 0.090 0.910 9 C -0.188 4.188 10 C -0.136 4.136 11 H 0.147 0.853 12 C -0.113 4.113 13 N 0.056 4.944 14 H 0.276 0.724 15 C -0.189 4.189 16 C -0.200 4.200 17 C -0.166 4.166 18 N -0.105 5.105 19 C -0.079 4.079 20 C -0.158 4.158 21 O -0.354 6.354 22 Si 0.681 3.319 23 C -0.237 4.237 24 H 0.079 0.921 25 H 0.095 0.905 26 H 0.084 0.916 27 H 0.247 0.753 28 H 0.130 0.870 29 H 0.098 0.902 30 H 0.167 0.833 31 H 0.154 0.846 32 H 0.136 0.864 33 H 0.143 0.857 34 H 0.145 0.855 35 H 0.134 0.866 36 H 0.145 0.855 37 H 0.138 0.862 38 H 0.100 0.900 39 H 0.132 0.868 40 H 0.271 0.729 41 H 0.162 0.838 42 H 0.239 0.761 43 H -0.218 1.218 44 H -0.230 1.230 45 H 0.174 0.826 Dipole moment (debyes) X Y Z Total from point charges 11.483 24.902 11.500 29.736 hybrid contribution 0.653 -0.088 -1.434 1.578 sum 12.136 24.814 10.067 29.400 Atomic orbital electron populations 1.20333 0.89633 1.03006 1.01981 1.20146 0.96119 0.91691 1.01916 1.20114 0.84273 0.93269 1.20291 1.17088 0.85667 0.83587 0.75683 1.90860 1.17954 1.83617 1.51506 1.45336 1.09234 1.05273 1.75281 1.22060 0.99765 0.79723 0.99835 0.90959 1.23784 0.97072 1.01409 0.96529 1.22988 0.97475 0.96432 0.96742 0.85284 1.23915 1.04207 0.99495 0.83685 1.44812 1.17636 1.17679 1.14287 0.72430 1.24129 1.05012 0.81443 1.08267 1.24273 0.95326 1.06895 0.93481 1.23286 0.97062 0.99828 0.96420 1.41647 1.06696 1.06262 1.55857 1.21050 0.96480 0.83680 1.06644 1.24793 0.91422 1.07638 0.91974 1.86569 1.42706 1.89354 1.16775 0.93469 0.78898 0.71551 0.88020 1.20843 0.91433 0.99510 1.11914 0.92114 0.90537 0.91581 0.75321 0.86962 0.90161 0.83310 0.84568 0.86408 0.85715 0.85454 0.86625 0.85474 0.86162 0.89984 0.86842 0.72890 0.83846 0.76067 1.21776 1.22974 0.82567 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.09 1.07 9.83 71.23 0.70 1.77 16 2 C -0.09 1.20 6.21 -19.57 -0.12 1.08 16 3 C -0.07 1.18 7.06 40.35 0.28 1.47 16 4 C 0.59 -11.03 7.79 86.45 0.67 -10.36 16 5 O -0.56 5.20 14.40 -4.32 -0.06 5.13 16 6 N -0.70 21.60 5.26 -443.98 -2.33 19.26 16 7 C 0.09 -3.16 4.32 45.52 0.20 -2.96 16 8 H 0.07 -1.83 7.46 -2.38 -0.02 -1.85 16 9 C -0.15 6.75 5.69 31.12 0.18 6.93 16 10 C -0.12 6.38 3.18 -10.27 -0.03 6.34 16 11 H 0.13 -7.44 8.09 -2.39 -0.02 -7.46 16 12 C 0.01 -0.56 4.57 86.30 0.39 -0.16 16 13 N -0.37 24.54 0.66 -948.83 -0.62 23.91 16 14 H 0.44 -31.06 8.40 -89.70 -0.75 -31.81 16 15 C -0.05 3.01 9.19 127.69 1.17 4.18 16 16 C -0.06 3.57 8.57 127.69 1.09 4.66 16 17 C -0.13 5.60 7.39 31.12 0.23 5.83 16 18 N -0.51 12.21 5.99 -171.93 -1.03 11.18 16 19 C 0.04 -0.83 6.47 41.35 0.27 -0.57 16 20 C -0.05 1.05 3.08 71.24 0.22 1.27 16 21 O -0.55 10.52 12.88 -148.98 -1.92 8.61 16 22 Si 0.78 -14.28 30.54 68.60 2.10 -12.19 16 23 C -0.21 3.49 9.27 22.01 0.20 3.69 16 24 H 0.06 -0.62 8.14 -2.39 -0.02 -0.64 16 25 H 0.08 -1.06 8.14 -2.38 -0.02 -1.08 16 26 H 0.07 -0.57 6.49 -2.39 -0.02 -0.58 16 27 H 0.41 -15.56 7.83 -92.71 -0.73 -16.28 16 28 H 0.11 -5.22 7.90 -2.39 -0.02 -5.23 16 29 H 0.08 -3.47 7.19 -2.39 -0.02 -3.49 16 30 H 0.15 -9.55 8.09 -2.39 -0.02 -9.57 16 31 H 0.14 -8.44 7.79 -2.39 -0.02 -8.46 16 32 H 0.12 -7.39 8.14 -2.38 -0.02 -7.41 16 33 H 0.12 -7.94 8.14 -2.39 -0.02 -7.96 16 34 H 0.13 -8.21 8.11 -2.39 -0.02 -8.23 16 35 H 0.12 -6.89 5.13 -2.39 -0.01 -6.90 16 36 H 0.13 -7.91 8.14 -2.39 -0.02 -7.93 16 37 H 0.12 -7.33 8.11 -2.39 -0.02 -7.35 16 38 H 0.08 -3.43 8.14 -2.39 -0.02 -3.45 16 39 H 0.11 -5.05 8.10 -2.39 -0.02 -5.07 16 40 H 0.43 -13.59 8.19 -92.71 -0.76 -14.35 16 41 H 0.14 -3.74 7.96 -2.39 -0.02 -3.76 16 42 H 0.39 -8.85 8.70 -74.06 -0.64 -9.49 16 43 H -0.29 3.54 7.11 99.48 0.71 4.24 16 44 H -0.30 3.03 7.11 99.48 0.71 3.74 16 45 H 0.16 -2.85 6.17 -2.91 -0.02 -2.87 16 Total: 1.00 -83.91 355.15 -0.23 -84.14 By element: Atomic # 1 Polarization: -161.40 SS G_CDS: -1.82 Total: -163.22 kcal Atomic # 6 Polarization: 17.71 SS G_CDS: 5.46 Total: 23.18 kcal Atomic # 7 Polarization: 58.34 SS G_CDS: -3.99 Total: 54.35 kcal Atomic # 8 Polarization: 15.72 SS G_CDS: -1.98 Total: 13.74 kcal Atomic # 14 Polarization: -14.28 SS G_CDS: 2.10 Total: -12.19 kcal Total: -83.91 -0.23 -84.14 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_13940406.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 188.359 kcal (2) G-P(sol) polarization free energy of solvation -83.908 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.233 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -84.141 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.218 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds