Wall clock time and date at job start Sun Mar 7 2021 06:32:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46908 * 1 3 3 H 1.00902 * 109.46565 * 2 1 4 4 C 1.46897 * 109.46845 * 119.99740 * 2 1 3 5 5 C 1.46897 * 109.47076 * 239.99405 * 2 1 3 6 6 C 1.52999 * 109.46820 * 175.00073 * 5 2 1 7 7 H 1.09000 * 112.84851 * 316.19615 * 6 5 2 8 8 C 1.54043 * 113.62073 * 87.50840 * 6 5 2 9 9 C 1.53779 * 86.98723 * 139.97735 * 8 6 5 10 10 H 1.09000 * 113.61600 * 219.98071 * 9 8 6 11 11 N 1.46501 * 113.61646 * 89.16419 * 9 8 6 12 12 C 1.34770 * 120.00107 * 105.86020 * 11 9 8 13 13 O 1.21275 * 120.00405 * 0.02562 * 12 11 9 14 14 C 1.50705 * 119.99792 * 179.97438 * 12 11 9 15 15 C 1.50706 * 109.47019 * 179.97438 * 14 12 11 16 16 C 1.34848 * 125.88717 * 85.02721 * 15 14 12 17 17 C 1.40892 * 107.41604 * 180.02562 * 16 15 14 18 18 C 1.34845 * 107.41758 * 359.97438 * 17 16 15 19 19 C 1.50696 * 125.89063 * 180.02562 * 18 17 16 20 20 O 1.42901 * 109.47040 * 119.97948 * 19 18 17 21 21 Si 1.86299 * 109.47100 * 359.97438 * 19 18 17 22 22 N 1.36335 * 125.89503 * 264.71755 * 15 14 12 23 23 C 1.53775 * 87.17401 * 334.56978 * 9 8 6 24 24 H 1.08997 * 109.46774 * 180.02562 * 1 2 3 25 25 H 1.08999 * 109.47090 * 300.00567 * 1 2 3 26 26 H 1.08998 * 109.46630 * 60.00166 * 1 2 3 27 27 H 1.09008 * 109.47226 * 299.99751 * 4 2 1 28 28 H 1.08994 * 109.47448 * 59.99654 * 4 2 1 29 29 H 1.09001 * 109.46961 * 180.02562 * 4 2 1 30 30 H 1.09007 * 109.47022 * 55.00640 * 5 2 1 31 31 H 1.08992 * 109.47240 * 295.00146 * 5 2 1 32 32 H 1.09000 * 113.61127 * 25.47283 * 8 6 5 33 33 H 1.09002 * 113.69791 * 254.49302 * 8 6 5 34 34 H 0.96999 * 119.99677 * 285.86373 * 11 9 8 35 35 H 1.08998 * 109.46847 * 60.00627 * 14 12 11 36 36 H 1.08993 * 109.47470 * 300.00074 * 14 12 11 37 37 H 1.08005 * 126.29553 * 0.02562 * 16 15 14 38 38 H 1.08002 * 126.28825 * 179.97438 * 17 16 15 39 39 H 1.09001 * 109.47263 * 239.98040 * 19 18 17 40 40 H 0.96706 * 113.99786 * 180.02562 * 20 19 18 41 41 H 1.48497 * 109.99836 * 60.00142 * 21 19 18 42 42 H 1.48501 * 109.99925 * 181.31716 * 21 19 18 43 43 H 0.97007 * 125.63051 * 0.02562 * 22 15 14 44 44 H 1.09004 * 113.61717 * 140.01796 * 23 9 8 45 45 H 1.09005 * 113.61888 * 270.92693 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8053 0.9513 0.0000 4 6 1.9587 -0.6924 1.1995 5 6 1.9587 -0.6926 -1.1993 6 6 3.4835 -0.5846 -1.2637 7 1 3.8473 0.4156 -1.0284 8 6 4.2144 -1.7048 -0.4996 9 6 5.2160 -1.7359 -1.6660 10 1 5.5294 -2.7417 -1.9458 11 7 6.3431 -0.8155 -1.4965 12 6 7.5621 -1.2942 -1.1783 13 8 7.7262 -2.4870 -1.0327 14 6 8.7216 -0.3474 -1.0045 15 6 9.9608 -1.1299 -0.6532 16 6 10.7992 -1.7184 -1.5302 17 6 11.8206 -2.3400 -0.7850 18 6 11.5678 -2.1071 0.5189 19 6 12.4019 -2.5847 1.6796 20 8 12.8732 -1.4588 2.4227 21 14 13.8552 -3.5594 1.0403 22 7 10.4308 -1.3598 0.6058 23 6 4.0891 -1.1739 -2.5487 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5139 0.8899 26 1 -0.3632 0.5138 -0.8900 27 1 1.5953 -0.1785 2.0895 28 1 1.5953 -1.7200 1.1996 29 1 3.0487 -0.6920 1.1997 30 1 1.5242 -0.2331 -2.0872 31 1 1.6704 -1.7428 -1.1556 32 1 3.6300 -2.6196 -0.4014 33 1 4.6526 -1.3780 0.4435 34 1 6.2120 0.1385 -1.6133 35 1 8.4982 0.3574 -0.2036 36 1 8.8874 0.1985 -1.9332 37 1 10.7050 -1.7141 -2.6061 38 1 12.6531 -2.9000 -1.1847 39 1 11.7955 -3.2188 2.3263 40 1 13.4189 -1.6919 3.1863 41 1 14.6901 -2.7061 0.1572 42 1 14.6683 -4.0630 2.1764 43 1 10.0218 -1.0464 1.4277 44 1 4.4260 -0.4187 -3.2588 45 1 3.4704 -1.9438 -3.0097 There are 55 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 55 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_14644196.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:26 Heat of formation + Delta-G solvation = 106.843783 kcal Electronic energy + Delta-G solvation = -23797.093304 eV Core-core repulsion = 20322.177309 eV Total energy + Delta-G solvation = -3474.915995 eV No. of doubly occupied orbitals = 55 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.181 amu Computer time = 0.66 seconds Orbital eigenvalues (eV) -42.40811 -42.19741 -40.75467 -39.00173 -37.87448 -34.53864 -33.10693 -31.98509 -30.34433 -29.52985 -29.25767 -26.69357 -25.96916 -25.13413 -23.77440 -22.27000 -21.38424 -21.06408 -20.56977 -19.09537 -18.64980 -18.33500 -18.15125 -17.70504 -17.32184 -16.78265 -16.36605 -16.09163 -15.65615 -15.16228 -15.03509 -14.99487 -14.65886 -14.34589 -14.10439 -14.02420 -13.75614 -13.70082 -13.55440 -13.49770 -13.36382 -13.29352 -13.06373 -12.95859 -12.71506 -12.49651 -12.13511 -12.02852 -11.66048 -11.33762 -11.03027 -10.67885 -10.07532 -9.84258 -8.98983 -4.92601 1.02981 1.03917 1.23368 1.57140 1.58421 1.82037 1.91308 2.23389 2.45774 2.88291 2.96644 3.21101 3.29109 3.36589 3.48589 3.64010 3.73617 3.80079 3.87714 4.01171 4.05399 4.17199 4.19277 4.20916 4.26905 4.34102 4.40831 4.44441 4.53438 4.59250 4.72218 4.73102 4.76383 4.77961 4.81452 4.86904 4.88046 4.96566 5.04871 5.17188 5.20243 5.26367 5.59052 5.94738 6.06909 6.45955 6.50153 6.65752 7.26476 Molecular weight = 295.18amu Principal moments of inertia in cm(-1) A = 0.030457 B = 0.002728 C = 0.002613 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 919.106274 B =10260.231577 C =10713.401766 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.368 5.368 3 H 0.439 0.561 4 C -0.057 4.057 5 C 0.008 3.992 6 C -0.116 4.116 7 H 0.134 0.866 8 C -0.151 4.151 9 C 0.092 3.908 10 H 0.063 0.937 11 N -0.700 5.700 12 C 0.514 3.486 13 O -0.574 6.574 14 C -0.067 4.067 15 C 0.036 3.964 16 C -0.205 4.205 17 C -0.208 4.208 18 C 0.019 3.981 19 C -0.055 4.055 20 O -0.561 6.561 21 Si 0.774 3.226 22 N -0.535 5.535 23 C -0.127 4.127 24 H 0.116 0.884 25 H 0.124 0.876 26 H 0.127 0.873 27 H 0.127 0.873 28 H 0.118 0.882 29 H 0.116 0.884 30 H 0.149 0.851 31 H 0.133 0.867 32 H 0.105 0.895 33 H 0.079 0.921 34 H 0.420 0.580 35 H 0.132 0.868 36 H 0.140 0.860 37 H 0.141 0.859 38 H 0.144 0.856 39 H 0.093 0.907 40 H 0.397 0.603 41 H -0.303 1.303 42 H -0.282 1.282 43 H 0.420 0.580 44 H 0.086 0.914 45 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -34.421 9.714 1.331 35.791 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.199 4.199 5 C -0.114 4.114 6 C -0.134 4.134 7 H 0.151 0.849 8 C -0.190 4.190 9 C -0.014 4.014 10 H 0.081 0.919 11 N -0.353 5.353 12 C 0.301 3.699 13 O -0.452 6.452 14 C -0.107 4.107 15 C -0.079 4.079 16 C -0.229 4.229 17 C -0.233 4.233 18 C -0.095 4.095 19 C -0.164 4.164 20 O -0.372 6.372 21 Si 0.679 3.321 22 N -0.130 5.130 23 C -0.166 4.166 24 H 0.135 0.865 25 H 0.143 0.857 26 H 0.146 0.854 27 H 0.145 0.855 28 H 0.136 0.864 29 H 0.135 0.865 30 H 0.167 0.833 31 H 0.151 0.849 32 H 0.123 0.877 33 H 0.098 0.902 34 H 0.258 0.742 35 H 0.150 0.850 36 H 0.158 0.842 37 H 0.159 0.841 38 H 0.161 0.839 39 H 0.111 0.889 40 H 0.248 0.752 41 H -0.230 1.230 42 H -0.208 1.208 43 H 0.258 0.742 44 H 0.104 0.896 45 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -33.947 8.911 1.098 35.114 hybrid contribution 0.811 1.024 1.197 1.771 sum -33.136 9.935 2.294 34.669 Atomic orbital electron populations 1.24122 0.75558 1.09378 1.09775 1.44814 1.15916 1.19270 1.14427 0.72344 1.24260 1.05600 1.02597 0.87468 1.23927 0.95443 1.03402 0.88645 1.23036 0.92428 1.00902 0.97054 0.84855 1.23809 0.97431 1.00072 0.97664 1.21964 0.86259 0.94025 0.99136 0.91899 1.45464 1.07331 1.11337 1.71160 1.20852 0.84663 0.88882 0.75516 1.90792 1.84598 1.18695 1.51095 1.20262 0.87033 0.96291 1.07126 1.19985 0.98731 1.05479 0.83667 1.20843 0.97600 1.04967 0.99492 1.20883 1.02823 1.07462 0.92095 1.19804 0.91469 1.03229 0.94949 1.24514 1.04838 0.93102 0.93984 1.86514 1.72057 1.32716 1.45882 0.93532 0.74891 0.83682 0.80014 1.41788 1.21093 1.42032 1.08129 1.23258 0.95443 1.01598 0.96291 0.86531 0.85726 0.85410 0.85487 0.86369 0.86535 0.83278 0.84875 0.87673 0.90218 0.74236 0.84968 0.84222 0.84086 0.83882 0.88940 0.75155 1.23002 1.20842 0.74182 0.89560 0.87411 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.00 9.19 127.69 1.17 4.17 16 2 N -0.37 24.60 0.66 -948.85 -0.62 23.98 16 3 H 0.44 -31.27 8.41 -89.69 -0.75 -32.03 16 4 C -0.06 3.54 8.57 127.69 1.09 4.64 16 5 C 0.01 -0.48 4.57 86.30 0.39 -0.09 16 6 C -0.12 6.33 3.19 -10.18 -0.03 6.30 16 7 H 0.13 -7.83 8.09 -2.39 -0.02 -7.85 16 8 C -0.15 6.88 5.71 31.21 0.18 7.05 16 9 C 0.09 -3.26 4.29 45.51 0.20 -3.06 16 10 H 0.06 -1.57 7.50 -2.39 -0.02 -1.59 16 11 N -0.70 23.65 5.26 -440.06 -2.32 21.34 16 12 C 0.51 -11.75 7.82 87.66 0.69 -11.07 16 13 O -0.57 6.03 15.65 -3.02 -0.05 5.98 16 14 C -0.07 1.68 6.24 29.11 0.18 1.86 16 15 C 0.04 -0.49 5.66 41.08 0.23 -0.26 16 16 C -0.20 1.80 10.76 22.14 0.24 2.04 16 17 C -0.21 1.41 9.37 22.14 0.21 1.62 16 18 C 0.02 -0.16 6.54 41.08 0.27 0.11 16 19 C -0.06 0.64 3.07 71.23 0.22 0.86 16 20 O -0.56 5.77 12.86 -148.98 -1.92 3.85 16 21 Si 0.77 -8.60 30.58 68.60 2.10 -6.50 16 22 N -0.53 6.73 6.07 -171.13 -1.04 5.69 16 23 C -0.13 5.68 7.38 31.12 0.23 5.91 16 24 H 0.12 -7.31 8.14 -2.39 -0.02 -7.33 16 25 H 0.12 -7.95 8.14 -2.39 -0.02 -7.97 16 26 H 0.13 -8.26 8.11 -2.39 -0.02 -8.28 16 27 H 0.13 -7.94 8.14 -2.38 -0.02 -7.96 16 28 H 0.12 -7.19 8.11 -2.39 -0.02 -7.21 16 29 H 0.12 -6.99 5.14 -2.39 -0.01 -7.00 16 30 H 0.15 -9.59 8.09 -2.38 -0.02 -9.61 16 31 H 0.13 -8.21 7.79 -2.39 -0.02 -8.23 16 32 H 0.10 -4.82 7.90 -2.39 -0.02 -4.84 16 33 H 0.08 -3.50 7.19 -2.39 -0.02 -3.52 16 34 H 0.42 -17.43 8.70 -92.71 -0.81 -18.24 16 35 H 0.13 -4.22 8.14 -2.39 -0.02 -4.24 16 36 H 0.14 -4.08 8.14 -2.39 -0.02 -4.10 16 37 H 0.14 -1.57 8.06 -2.91 -0.02 -1.59 16 38 H 0.14 -1.24 6.22 -2.91 -0.02 -1.25 16 39 H 0.09 -1.46 7.96 -2.39 -0.02 -1.48 16 40 H 0.40 -7.12 8.74 -74.05 -0.65 -7.76 16 41 H -0.30 0.79 7.11 99.48 0.71 1.50 16 42 H -0.28 2.15 7.11 99.48 0.71 2.86 16 43 H 0.42 -7.35 8.96 -92.70 -0.83 -8.18 16 44 H 0.09 -3.71 8.14 -2.38 -0.02 -3.73 16 45 H 0.11 -4.78 8.10 -2.38 -0.02 -4.80 16 Total: 1.00 -89.44 359.62 -0.56 -90.00 By element: Atomic # 1 Polarization: -162.45 SS G_CDS: -1.98 Total: -164.43 kcal Atomic # 6 Polarization: 14.82 SS G_CDS: 5.27 Total: 20.09 kcal Atomic # 7 Polarization: 54.99 SS G_CDS: -3.98 Total: 51.01 kcal Atomic # 8 Polarization: 11.80 SS G_CDS: -1.96 Total: 9.84 kcal Atomic # 14 Polarization: -8.60 SS G_CDS: 2.10 Total: -6.50 kcal Total: -89.44 -0.56 -90.00 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_14644196.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 196.844 kcal (2) G-P(sol) polarization free energy of solvation -89.438 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 107.406 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.562 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -90.000 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.844 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.66 seconds