Wall clock time and date at job start Sun Mar 7 2021 06:32:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46906 * 1 3 3 H 1.00905 * 109.46782 * 2 1 4 4 C 1.46896 * 109.47268 * 120.00234 * 2 1 3 5 5 C 1.46902 * 109.46877 * 240.00588 * 2 1 3 6 6 C 1.52997 * 109.46761 * 174.99840 * 5 2 1 7 7 H 1.08996 * 112.85345 * 43.79888 * 6 5 2 8 8 C 1.53786 * 113.61204 * 175.00032 * 6 5 2 9 9 C 1.53777 * 87.08089 * 140.06144 * 8 6 5 10 10 H 1.09005 * 113.61322 * 219.93247 * 9 8 6 11 11 N 1.46506 * 113.61462 * 89.11581 * 9 8 6 12 12 C 1.34771 * 119.99813 * 156.52457 * 11 9 8 13 13 O 1.21276 * 120.00509 * 0.02562 * 12 11 9 14 14 C 1.50699 * 119.99897 * 179.97438 * 12 11 9 15 15 C 1.53153 * 109.86069 * 278.13904 * 14 12 11 16 16 C 1.53045 * 108.77177 * 179.46402 * 15 14 12 17 17 C 1.50207 * 110.17670 * 49.60048 * 16 15 14 18 18 C 1.50697 * 118.54488 * 160.03257 * 17 16 15 19 19 O 1.42904 * 109.47165 * 69.99870 * 18 17 16 20 20 Si 1.86298 * 109.47318 * 190.00078 * 18 17 16 21 21 C 1.31116 * 122.90583 * 340.05780 * 17 16 15 22 22 N 1.38922 * 121.84935 * 0.40043 * 21 17 16 23 23 C 1.53777 * 87.17498 * 334.52191 * 9 8 6 24 24 H 1.09001 * 109.46875 * 180.02562 * 1 2 3 25 25 H 1.09003 * 109.46630 * 299.99204 * 1 2 3 26 26 H 1.08997 * 109.47474 * 59.99799 * 1 2 3 27 27 H 1.08993 * 109.47303 * 59.99917 * 4 2 1 28 28 H 1.09004 * 109.46887 * 180.02562 * 4 2 1 29 29 H 1.09003 * 109.47304 * 299.99585 * 4 2 1 30 30 H 1.08994 * 109.47420 * 54.99467 * 5 2 1 31 31 H 1.09000 * 109.46880 * 294.99419 * 5 2 1 32 32 H 1.08997 * 113.61170 * 25.50645 * 8 6 5 33 33 H 1.08999 * 113.61078 * 254.60948 * 8 6 5 34 34 H 0.96993 * 119.99526 * 336.52649 * 11 9 8 35 35 H 1.09002 * 109.81517 * 39.13907 * 14 12 11 36 36 H 1.08999 * 109.42251 * 59.73947 * 15 14 12 37 37 H 1.09000 * 109.61234 * 299.30833 * 15 14 12 38 38 H 1.09002 * 109.33190 * 289.42633 * 16 15 14 39 39 H 1.08996 * 109.32641 * 169.77605 * 16 15 14 40 40 H 1.08999 * 109.47128 * 310.00064 * 18 17 16 41 41 H 0.96701 * 113.99603 * 179.97438 * 19 18 17 42 42 H 1.48500 * 110.00354 * 178.68280 * 20 18 17 43 43 H 1.48496 * 109.99902 * 300.00342 * 20 18 17 44 44 H 1.08003 * 119.07194 * 180.38175 * 21 17 16 45 45 H 0.96997 * 120.55267 * 166.64283 * 22 21 17 46 46 H 1.09003 * 113.61170 * 140.01961 * 23 9 8 47 47 H 1.08999 * 113.61810 * 270.92846 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4691 0.0000 0.0000 3 1 1.8054 0.9514 0.0000 4 6 1.9587 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 3.4835 -0.5844 -1.2640 7 1 3.9616 -0.7637 -0.3010 8 6 4.1092 -1.3818 -2.4205 9 6 5.0680 -0.1955 -2.6156 10 1 5.2620 0.0417 -3.6617 11 7 6.2930 -0.2937 -1.8180 12 6 7.4024 0.3678 -2.2027 13 8 7.3866 1.0446 -3.2088 14 6 8.6622 0.2673 -1.3819 15 6 8.5930 1.2403 -0.2012 16 6 9.8767 1.1082 0.6217 17 6 11.0781 1.1844 -0.2766 18 6 12.4118 1.5321 0.3326 19 8 12.8641 0.4444 1.1415 20 14 13.6487 1.8543 -1.0228 21 6 11.0176 0.9623 -1.5674 22 7 9.8228 0.6454 -2.2015 23 6 3.9845 0.6874 -1.9745 24 1 -0.3633 -1.0277 0.0005 25 1 -0.3633 0.5137 0.8901 26 1 -0.3634 0.5138 -0.8899 27 1 1.5955 -1.7201 1.1994 28 1 3.0488 -0.6921 1.1995 29 1 1.5955 -0.1787 2.0894 30 1 1.5240 -0.2329 -2.0872 31 1 1.6704 -1.7427 -1.1559 32 1 3.4315 -1.5382 -3.2598 33 1 4.6067 -2.2974 -2.1006 34 1 6.3054 -0.8348 -1.0131 35 1 8.7846 -0.7522 -1.0161 36 1 7.7325 0.9945 0.4211 37 1 8.4999 2.2607 -0.5729 38 1 9.8751 0.1502 1.1416 39 1 9.9210 1.9153 1.3529 40 1 12.3079 2.4248 0.9493 41 1 13.7193 0.5988 1.5658 42 1 14.9599 2.2293 -0.4354 43 1 13.7993 0.6447 -1.8709 44 1 11.9219 1.0278 -2.1542 45 1 9.7554 0.6736 -3.1687 46 1 4.3815 1.4413 -1.2946 47 1 3.2729 1.0958 -2.6921 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_15413834.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:30 Heat of formation + Delta-G solvation = 85.671328 kcal Electronic energy + Delta-G solvation = -24790.743106 eV Core-core repulsion = 21287.597526 eV Total energy + Delta-G solvation = -3503.145580 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.197 amu Computer time = 0.63 seconds Orbital eigenvalues (eV) -42.24058 -41.39258 -39.92752 -38.88346 -37.51107 -34.71552 -33.33839 -32.95307 -30.15249 -29.37349 -27.62703 -26.85041 -25.83871 -25.36782 -24.01089 -23.42345 -22.02662 -20.49447 -19.41285 -19.08608 -19.06610 -18.44212 -17.82233 -17.56836 -17.17780 -17.07058 -16.45806 -16.01113 -15.65774 -15.44069 -15.14873 -15.04590 -14.77246 -14.40634 -14.12179 -13.99260 -13.88026 -13.75172 -13.68919 -13.52048 -13.46936 -13.22630 -13.12404 -12.93394 -12.82540 -12.48128 -12.03455 -11.81372 -11.73682 -11.70080 -11.33899 -11.28432 -10.93293 -10.32119 -10.17790 -8.50198 -4.96444 1.04003 1.26388 1.34786 1.40707 1.53376 1.82851 1.91573 2.58576 2.92242 2.97344 3.18269 3.40508 3.44446 3.46818 3.61022 3.70581 3.77656 3.81131 3.90384 3.90776 4.03243 4.19945 4.22563 4.27901 4.38273 4.43962 4.46395 4.51933 4.55681 4.62688 4.67120 4.74746 4.76439 4.77329 4.83239 4.85369 4.88762 4.96488 4.98939 5.03756 5.15334 5.23902 5.24997 5.51417 5.56123 6.22626 6.40849 6.64068 6.74925 7.08556 Molecular weight = 297.20amu Principal moments of inertia in cm(-1) A = 0.028118 B = 0.002972 C = 0.002783 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 995.552885 B = 9417.455440 C =10058.731242 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.047 4.047 2 N -0.372 5.372 3 H 0.436 0.564 4 C -0.055 4.055 5 C 0.008 3.992 6 C -0.120 4.120 7 H 0.133 0.867 8 C -0.127 4.127 9 C 0.091 3.909 10 H 0.067 0.933 11 N -0.693 5.693 12 C 0.518 3.482 13 O -0.571 6.571 14 C 0.133 3.867 15 C -0.114 4.114 16 C -0.053 4.053 17 C -0.245 4.245 18 C -0.052 4.052 19 O -0.561 6.561 20 Si 0.730 3.270 21 C 0.133 3.867 22 N -0.740 5.740 23 C -0.150 4.150 24 H 0.120 0.880 25 H 0.124 0.876 26 H 0.123 0.877 27 H 0.122 0.878 28 H 0.124 0.876 29 H 0.125 0.875 30 H 0.140 0.860 31 H 0.143 0.857 32 H 0.110 0.890 33 H 0.084 0.916 34 H 0.420 0.580 35 H 0.103 0.897 36 H 0.113 0.887 37 H 0.064 0.936 38 H 0.067 0.933 39 H 0.078 0.922 40 H 0.084 0.916 41 H 0.387 0.613 42 H -0.300 1.300 43 H -0.303 1.303 44 H 0.130 0.870 45 H 0.406 0.594 46 H 0.079 0.921 47 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -32.660 -3.433 7.784 33.750 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.189 4.189 2 N 0.052 4.948 3 H 0.272 0.728 4 C -0.197 4.197 5 C -0.114 4.114 6 C -0.139 4.139 7 H 0.151 0.849 8 C -0.165 4.165 9 C -0.014 4.014 10 H 0.086 0.914 11 N -0.345 5.345 12 C 0.304 3.696 13 O -0.449 6.449 14 C 0.024 3.976 15 C -0.153 4.153 16 C -0.090 4.090 17 C -0.255 4.255 18 C -0.163 4.163 19 O -0.370 6.370 20 Si 0.639 3.361 21 C 0.012 3.988 22 N -0.372 5.372 23 C -0.188 4.188 24 H 0.139 0.861 25 H 0.143 0.857 26 H 0.141 0.859 27 H 0.141 0.859 28 H 0.142 0.858 29 H 0.144 0.856 30 H 0.158 0.842 31 H 0.161 0.839 32 H 0.129 0.871 33 H 0.103 0.897 34 H 0.258 0.742 35 H 0.121 0.879 36 H 0.131 0.869 37 H 0.083 0.917 38 H 0.085 0.915 39 H 0.097 0.903 40 H 0.101 0.899 41 H 0.236 0.764 42 H -0.228 1.228 43 H -0.231 1.231 44 H 0.147 0.853 45 H 0.242 0.758 46 H 0.098 0.902 47 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges -32.693 -3.741 6.601 33.561 hybrid contribution 1.555 -0.435 0.486 1.686 sum -31.138 -4.176 7.087 32.206 Atomic orbital electron populations 1.24125 0.75583 1.09537 1.09611 1.44807 1.15934 1.19329 1.14737 0.72759 1.24216 1.05886 1.02619 0.86997 1.23917 0.95290 1.03662 0.88543 1.23131 0.93484 0.96490 1.00751 0.84944 1.23271 0.97252 0.96727 0.99297 1.22016 0.83965 0.99731 0.95683 0.91434 1.45418 1.09920 1.49896 1.29315 1.20696 0.85570 0.78614 0.84736 1.90762 1.84873 1.41530 1.27746 1.21126 0.83873 1.01002 0.91595 1.21762 0.99511 0.98789 0.95211 1.19995 0.90277 1.02373 0.96400 1.20164 0.95500 1.15804 0.94032 1.24606 0.99241 0.91658 1.00789 1.86556 1.41630 1.42910 1.65947 0.94677 0.77424 0.84243 0.79756 1.20457 0.88914 0.95564 0.93823 1.44361 1.08282 1.76092 1.08508 1.23703 0.97878 0.96700 1.00550 0.86126 0.85714 0.85855 0.85939 0.85786 0.85627 0.84211 0.83915 0.87142 0.89687 0.74228 0.87943 0.86910 0.91723 0.91503 0.90309 0.89860 0.76368 1.22832 1.23139 0.85291 0.75793 0.90229 0.87385 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.01 9.19 127.69 1.17 4.18 16 2 N -0.37 24.94 0.66 -948.85 -0.62 24.31 16 3 H 0.44 -30.29 8.44 -89.69 -0.76 -31.05 16 4 C -0.06 3.58 8.97 127.69 1.15 4.72 16 5 C 0.01 -0.49 4.48 86.30 0.39 -0.10 16 6 C -0.12 6.61 3.46 -10.17 -0.04 6.57 16 7 H 0.13 -7.77 6.10 -2.39 -0.01 -7.78 16 8 C -0.13 5.72 7.38 31.12 0.23 5.95 16 9 C 0.09 -3.30 4.29 45.51 0.20 -3.10 16 10 H 0.07 -1.79 7.50 -2.38 -0.02 -1.80 16 11 N -0.69 23.35 5.26 -440.05 -2.32 21.03 16 12 C 0.52 -11.83 7.08 87.66 0.62 -11.21 16 13 O -0.57 7.12 15.72 -3.02 -0.05 7.07 16 14 C 0.13 -2.97 3.35 44.20 0.15 -2.82 16 15 C -0.11 2.79 5.43 30.66 0.17 2.96 16 16 C -0.05 1.02 5.86 29.71 0.17 1.19 16 17 C -0.24 3.40 5.40 -16.76 -0.09 3.31 16 18 C -0.05 0.68 2.80 71.23 0.20 0.88 16 19 O -0.56 5.70 12.86 -148.98 -1.92 3.78 16 20 Si 0.73 -8.61 29.92 68.60 2.05 -6.56 16 21 C 0.13 -1.80 9.61 83.41 0.80 -1.00 16 22 N -0.74 11.65 5.46 -329.63 -1.80 9.85 16 23 C -0.15 6.87 7.45 31.21 0.23 7.10 16 24 H 0.12 -7.66 8.14 -2.39 -0.02 -7.68 16 25 H 0.12 -7.95 8.14 -2.39 -0.02 -7.97 16 26 H 0.12 -7.87 8.11 -2.39 -0.02 -7.89 16 27 H 0.12 -7.83 8.11 -2.39 -0.02 -7.85 16 28 H 0.12 -8.04 6.10 -2.38 -0.01 -8.05 16 29 H 0.13 -8.06 8.14 -2.39 -0.02 -8.08 16 30 H 0.14 -8.80 7.80 -2.39 -0.02 -8.82 16 31 H 0.14 -9.07 8.09 -2.39 -0.02 -9.09 16 32 H 0.11 -4.98 8.10 -2.39 -0.02 -5.00 16 33 H 0.08 -3.67 8.14 -2.39 -0.02 -3.69 16 34 H 0.42 -17.13 8.70 -92.71 -0.81 -17.93 16 35 H 0.10 -2.58 8.14 -2.39 -0.02 -2.60 16 36 H 0.11 -3.67 8.14 -2.39 -0.02 -3.69 16 37 H 0.06 -1.32 8.14 -2.39 -0.02 -1.34 16 38 H 0.07 -1.24 8.14 -2.39 -0.02 -1.26 16 39 H 0.08 -1.54 8.14 -2.39 -0.02 -1.56 16 40 H 0.08 -1.35 7.96 -2.39 -0.02 -1.37 16 41 H 0.39 -6.35 8.74 -74.06 -0.65 -6.99 16 42 H -0.30 1.70 7.11 99.48 0.71 2.41 16 43 H -0.30 1.43 6.88 99.48 0.68 2.11 16 44 H 0.13 -1.72 4.34 -2.91 -0.01 -1.74 16 45 H 0.41 -5.90 8.12 -92.71 -0.75 -6.66 16 46 H 0.08 -3.49 8.14 -2.39 -0.02 -3.51 16 47 H 0.11 -5.03 7.91 -2.39 -0.02 -5.05 16 Total: 1.00 -84.58 364.20 -1.26 -85.84 By element: Atomic # 1 Polarization: -161.99 SS G_CDS: -1.96 Total: -163.95 kcal Atomic # 6 Polarization: 13.29 SS G_CDS: 5.35 Total: 18.63 kcal Atomic # 7 Polarization: 59.93 SS G_CDS: -4.74 Total: 55.19 kcal Atomic # 8 Polarization: 12.82 SS G_CDS: -1.96 Total: 10.85 kcal Atomic # 14 Polarization: -8.61 SS G_CDS: 2.05 Total: -6.56 kcal Total: -84.58 -1.26 -85.84 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_15413834.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 171.508 kcal (2) G-P(sol) polarization free energy of solvation -84.575 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 86.933 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.262 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.837 kcal (6) G-S(sol) free energy of system = (1) + (5) 85.671 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.63 seconds