Wall clock time and date at job start Sun Mar 7 2021 06:32:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46904 * 1 3 3 H 1.00896 * 109.47355 * 2 1 4 4 C 1.46899 * 109.46772 * 120.00600 * 2 1 3 5 5 C 1.46899 * 109.46957 * 240.00239 * 2 1 3 6 6 C 1.52995 * 109.47333 * 175.00299 * 5 2 1 7 7 H 1.09002 * 112.90787 * 43.74428 * 6 5 2 8 8 C 1.53774 * 113.61835 * 175.00286 * 6 5 2 9 9 C 1.53782 * 87.08533 * 139.98175 * 8 6 5 10 10 H 1.08995 * 113.61318 * 219.93959 * 9 8 6 11 11 N 1.46497 * 113.61424 * 89.11374 * 9 8 6 12 12 C 1.34784 * 119.99834 * 155.00249 * 11 9 8 13 13 O 1.21280 * 119.99506 * 359.97438 * 12 11 9 14 14 C 1.50696 * 119.99889 * 180.02562 * 12 11 9 15 15 C 1.53039 * 109.32789 * 179.13916 * 14 12 11 16 16 C 1.53545 * 108.56206 * 169.83054 * 15 14 12 17 17 N 1.47036 * 107.65472 * 299.04816 * 16 15 14 18 18 C 1.38921 * 118.88519 * 43.66803 * 17 16 15 19 19 C 1.31122 * 121.84780 * 346.67911 * 18 17 16 20 20 C 1.50696 * 118.54491 * 180.38779 * 19 18 17 21 21 O 1.42897 * 109.47292 * 110.00174 * 20 19 18 22 22 Si 1.86297 * 109.47343 * 349.99727 * 20 19 18 23 23 C 1.53781 * 87.07864 * 334.56488 * 9 8 6 24 24 H 1.09000 * 109.47366 * 179.97438 * 1 2 3 25 25 H 1.08996 * 109.46966 * 299.99954 * 1 2 3 26 26 H 1.09004 * 109.46939 * 59.99567 * 1 2 3 27 27 H 1.09004 * 109.46905 * 179.97438 * 4 2 1 28 28 H 1.08997 * 109.47292 * 299.99868 * 4 2 1 29 29 H 1.09000 * 109.47212 * 59.99861 * 4 2 1 30 30 H 1.09010 * 109.47167 * 55.00281 * 5 2 1 31 31 H 1.09005 * 109.47440 * 295.00635 * 5 2 1 32 32 H 1.09002 * 113.61713 * 25.43216 * 8 6 5 33 33 H 1.09003 * 113.61661 * 254.52867 * 8 6 5 34 34 H 0.96995 * 120.00298 * 335.00224 * 11 9 8 35 35 H 1.08999 * 109.33027 * 59.65026 * 14 12 11 36 36 H 1.09002 * 109.62096 * 50.10729 * 15 14 12 37 37 H 1.08995 * 109.62041 * 289.55193 * 15 14 12 38 38 H 1.09003 * 109.82071 * 179.51041 * 16 15 14 39 39 H 1.08996 * 109.81898 * 58.58639 * 16 15 14 40 40 H 0.96997 * 120.55510 * 223.63989 * 17 16 15 41 41 H 1.07997 * 119.07676 * 166.70597 * 18 17 16 42 42 H 1.09001 * 109.46698 * 230.00035 * 20 19 18 43 43 H 0.96698 * 114.00061 * 299.99597 * 21 20 19 44 44 H 1.48499 * 110.00052 * 58.68403 * 22 20 19 45 45 H 1.48501 * 110.00057 * 180.02562 * 22 20 19 46 46 H 1.09004 * 113.61165 * 139.97714 * 23 9 8 47 47 H 1.08996 * 113.62100 * 270.88741 * 23 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9512 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 3.4834 -0.5846 -1.2640 7 1 3.9625 -0.7628 -0.3012 8 6 4.1091 -1.3820 -2.4204 9 6 5.0667 -0.1949 -2.6169 10 1 5.2596 0.0419 -3.6632 11 7 6.2922 -0.2914 -1.8200 12 6 7.4096 0.3461 -2.2223 13 8 7.4004 0.9992 -3.2442 14 6 8.6704 0.2464 -1.4030 15 6 9.7848 1.0391 -2.0898 16 6 10.9765 1.1416 -1.1269 17 7 10.5189 1.8549 0.0746 18 6 9.2862 1.5237 0.6230 19 6 8.4137 0.7922 -0.0273 20 6 7.0954 0.4850 0.6350 21 8 6.0499 1.1931 -0.0339 22 14 7.1594 1.0130 2.4204 23 6 3.9817 0.6852 -1.9742 24 1 -0.3634 -1.0276 -0.0005 25 1 -0.3633 0.5138 0.8900 26 1 -0.3633 0.5139 -0.8900 27 1 3.0487 -0.6930 1.1992 28 1 1.5953 -0.1789 2.0894 29 1 1.5952 -1.7203 1.1993 30 1 1.5240 -0.2328 -2.0873 31 1 1.6702 -1.7427 -1.1560 32 1 3.4311 -1.5396 -3.2592 33 1 4.6078 -2.2969 -2.1004 34 1 6.2996 -0.8140 -1.0030 35 1 8.9691 -0.7991 -1.3263 36 1 9.4254 2.0385 -2.3351 37 1 10.0928 0.5243 -2.9998 38 1 11.7871 1.6961 -1.5998 39 1 11.3195 0.1432 -0.8559 40 1 11.0687 2.5449 0.4778 41 1 9.0395 1.8791 1.6125 42 1 6.9019 -0.5862 0.5796 43 1 6.1569 2.1541 -0.0243 44 1 7.4542 2.4657 2.5102 45 1 5.8653 0.7149 3.0850 46 1 4.3776 1.4392 -1.2938 47 1 3.2688 1.0928 -2.6909 There are 56 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 56 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_15608500.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:34 Heat of formation + Delta-G solvation = 104.746755 kcal Electronic energy + Delta-G solvation = -26573.387548 eV Core-core repulsion = 23071.069140 eV Total energy + Delta-G solvation = -3502.318408 eV No. of doubly occupied orbitals = 56 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 297.197 amu Computer time = 0.64 seconds Orbital eigenvalues (eV) -42.24315 -41.43274 -39.73284 -38.68553 -37.57472 -34.38453 -33.24976 -32.70809 -30.06637 -29.40768 -27.35028 -26.79186 -26.17306 -25.49439 -23.62528 -23.27060 -21.93692 -20.34816 -19.38113 -19.31794 -18.96345 -18.08865 -17.66925 -17.39049 -17.13012 -16.79405 -16.40105 -16.00457 -15.73120 -15.47839 -15.12182 -15.01842 -14.74048 -14.48916 -14.05788 -13.90180 -13.81292 -13.71174 -13.50678 -13.43658 -13.24967 -13.20548 -13.06626 -12.80754 -12.61394 -12.20069 -11.95087 -11.89341 -11.68034 -11.52049 -11.41986 -11.23281 -10.72756 -10.34396 -9.74232 -8.46909 -4.74955 1.01583 1.27675 1.44380 1.64860 1.82073 1.99754 2.33306 2.63778 2.91360 2.97520 3.21319 3.42593 3.45989 3.52621 3.63129 3.77839 3.81724 3.92235 3.98649 4.00853 4.17187 4.19249 4.25869 4.30729 4.34268 4.35167 4.45810 4.51768 4.62193 4.65393 4.67660 4.75597 4.77632 4.79832 4.80833 4.83960 4.87761 4.96390 5.08039 5.20364 5.21994 5.29015 5.32680 5.45094 5.76769 6.29524 6.52107 6.70646 6.88979 7.43355 Molecular weight = 297.20amu Principal moments of inertia in cm(-1) A = 0.019096 B = 0.005555 C = 0.004533 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1465.888027 B = 5039.743904 C = 6176.100531 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.372 5.372 3 H 0.434 0.566 4 C -0.054 4.054 5 C 0.008 3.992 6 C -0.116 4.116 7 H 0.127 0.873 8 C -0.129 4.129 9 C 0.099 3.901 10 H 0.056 0.944 11 N -0.672 5.672 12 C 0.532 3.468 13 O -0.601 6.601 14 C -0.038 4.038 15 C -0.120 4.120 16 C 0.120 3.880 17 N -0.751 5.751 18 C 0.147 3.853 19 C -0.288 4.288 20 C -0.040 4.040 21 O -0.528 6.528 22 Si 0.725 3.275 23 C -0.147 4.147 24 H 0.123 0.877 25 H 0.124 0.876 26 H 0.123 0.877 27 H 0.118 0.882 28 H 0.124 0.876 29 H 0.126 0.874 30 H 0.138 0.862 31 H 0.143 0.857 32 H 0.106 0.894 33 H 0.081 0.919 34 H 0.412 0.588 35 H 0.108 0.892 36 H 0.049 0.951 37 H 0.069 0.931 38 H 0.086 0.914 39 H 0.074 0.926 40 H 0.409 0.591 41 H 0.142 0.858 42 H 0.132 0.868 43 H 0.374 0.626 44 H -0.311 1.311 45 H -0.280 1.280 46 H 0.089 0.911 47 H 0.095 0.905 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -19.898 -6.019 8.360 22.406 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.052 4.948 3 H 0.270 0.730 4 C -0.196 4.196 5 C -0.113 4.113 6 C -0.134 4.134 7 H 0.145 0.855 8 C -0.167 4.167 9 C -0.007 4.007 10 H 0.074 0.926 11 N -0.324 5.324 12 C 0.319 3.681 13 O -0.482 6.482 14 C -0.059 4.059 15 C -0.159 4.159 16 C -0.004 4.004 17 N -0.380 5.380 18 C 0.024 3.976 19 C -0.300 4.300 20 C -0.152 4.152 21 O -0.335 6.335 22 Si 0.633 3.367 23 C -0.185 4.185 24 H 0.141 0.859 25 H 0.142 0.858 26 H 0.142 0.858 27 H 0.137 0.863 28 H 0.142 0.858 29 H 0.145 0.855 30 H 0.156 0.844 31 H 0.161 0.839 32 H 0.125 0.875 33 H 0.099 0.901 34 H 0.252 0.748 35 H 0.126 0.874 36 H 0.068 0.932 37 H 0.087 0.913 38 H 0.105 0.895 39 H 0.092 0.908 40 H 0.244 0.756 41 H 0.159 0.841 42 H 0.149 0.851 43 H 0.223 0.777 44 H -0.240 1.240 45 H -0.206 1.206 46 H 0.107 0.893 47 H 0.113 0.887 Dipole moment (debyes) X Y Z Total from point charges -20.538 -6.035 8.075 22.879 hybrid contribution 0.559 1.596 -0.610 1.798 sum -19.979 -4.438 7.465 21.785 Atomic orbital electron populations 1.24135 0.75450 1.09669 1.09565 1.44807 1.15994 1.19226 1.14766 0.73022 1.24194 1.05698 1.02768 0.86989 1.23935 0.95543 1.03525 0.88345 1.22984 0.92996 0.96926 1.00542 0.85512 1.23274 0.97538 0.96825 0.99099 1.21795 0.84799 0.99065 0.95025 0.92571 1.45487 1.08890 1.50993 1.27056 1.20643 0.85698 0.77572 0.84141 1.90707 1.85890 1.43529 1.28075 1.19682 0.92058 1.01619 0.92570 1.21646 0.95731 1.00382 0.98183 1.21655 0.95754 0.97915 0.85096 1.44740 1.19570 1.43042 1.30665 1.20792 0.85917 0.94771 0.96086 1.20544 0.99105 1.13909 0.96403 1.24568 0.85102 1.00960 1.04562 1.86582 1.46684 1.23322 1.76862 0.93727 0.85106 0.80940 0.76952 1.23625 0.97579 0.97180 1.00153 0.85880 0.85757 0.85845 0.86324 0.85790 0.85510 0.84370 0.83853 0.87535 0.90055 0.74762 0.87383 0.93230 0.91277 0.89539 0.90831 0.75558 0.84122 0.85050 0.77730 1.24009 1.20639 0.89281 0.88669 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 2.86 9.19 127.69 1.17 4.03 16 2 N -0.37 23.42 0.66 -948.82 -0.62 22.80 16 3 H 0.43 -28.02 8.44 -89.70 -0.76 -28.78 16 4 C -0.05 3.30 8.98 127.69 1.15 4.44 16 5 C 0.01 -0.49 4.48 86.30 0.39 -0.10 16 6 C -0.12 5.75 3.45 -10.27 -0.04 5.71 16 7 H 0.13 -6.57 6.10 -2.39 -0.01 -6.58 16 8 C -0.13 5.17 7.39 31.12 0.23 5.40 16 9 C 0.10 -3.03 4.32 45.52 0.20 -2.84 16 10 H 0.06 -1.14 7.46 -2.39 -0.02 -1.16 16 11 N -0.67 19.03 3.08 -440.04 -1.35 17.68 16 12 C 0.53 -9.67 6.35 87.65 0.56 -9.11 16 13 O -0.60 3.97 15.40 -3.03 -0.05 3.93 16 14 C -0.04 0.80 2.74 -12.43 -0.03 0.77 16 15 C -0.12 1.95 4.91 30.79 0.15 2.10 16 16 C 0.12 -2.42 7.16 86.46 0.62 -1.80 16 17 N -0.75 16.00 5.83 -345.88 -2.02 13.98 16 18 C 0.15 -3.45 9.62 83.41 0.80 -2.65 16 19 C -0.29 7.34 5.14 -16.76 -0.09 7.26 16 20 C -0.04 1.32 1.74 71.23 0.12 1.45 16 21 O -0.53 18.02 6.89 -148.98 -1.03 16.99 16 22 Si 0.72 -21.82 29.95 68.60 2.05 -19.76 16 23 C -0.15 5.91 7.09 31.12 0.22 6.13 16 24 H 0.12 -7.53 8.14 -2.39 -0.02 -7.55 16 25 H 0.12 -7.59 8.14 -2.39 -0.02 -7.61 16 26 H 0.12 -7.53 8.11 -2.38 -0.02 -7.55 16 27 H 0.12 -7.00 6.10 -2.38 -0.01 -7.02 16 28 H 0.12 -7.46 8.14 -2.39 -0.02 -7.48 16 29 H 0.13 -7.71 8.11 -2.39 -0.02 -7.73 16 30 H 0.14 -8.13 7.79 -2.38 -0.02 -8.15 16 31 H 0.14 -8.60 8.09 -2.38 -0.02 -8.62 16 32 H 0.11 -4.32 8.10 -2.39 -0.02 -4.34 16 33 H 0.08 -3.14 8.14 -2.39 -0.02 -3.16 16 34 H 0.41 -14.09 5.65 -92.71 -0.52 -14.62 16 35 H 0.11 -2.58 8.14 -2.39 -0.02 -2.60 16 36 H 0.05 -0.49 7.75 -2.39 -0.02 -0.51 16 37 H 0.07 -0.98 8.14 -2.39 -0.02 -1.00 16 38 H 0.09 -1.77 8.14 -2.39 -0.02 -1.79 16 39 H 0.07 -1.58 8.14 -2.39 -0.02 -1.60 16 40 H 0.41 -9.53 8.96 -92.71 -0.83 -10.36 16 41 H 0.14 -3.68 4.30 -2.91 -0.01 -3.69 16 42 H 0.13 -5.00 6.39 -2.39 -0.02 -5.02 16 43 H 0.37 -12.29 8.70 -74.06 -0.64 -12.93 16 44 H -0.31 6.69 6.84 99.48 0.68 7.37 16 45 H -0.28 7.63 7.11 99.48 0.71 8.33 16 46 H 0.09 -3.38 5.82 -2.38 -0.01 -3.40 16 47 H 0.09 -3.89 7.90 -2.39 -0.02 -3.91 16 Total: 1.00 -75.75 347.24 0.69 -75.06 By element: Atomic # 1 Polarization: -149.72 SS G_CDS: -1.75 Total: -151.46 kcal Atomic # 6 Polarization: 15.33 SS G_CDS: 5.45 Total: 20.78 kcal Atomic # 7 Polarization: 58.45 SS G_CDS: -3.99 Total: 54.46 kcal Atomic # 8 Polarization: 21.99 SS G_CDS: -1.07 Total: 20.92 kcal Atomic # 14 Polarization: -21.82 SS G_CDS: 2.05 Total: -19.76 kcal Total: -75.75 0.69 -75.06 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_15608500.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 179.805 kcal (2) G-P(sol) polarization free energy of solvation -75.752 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 104.053 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.694 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -75.059 kcal (6) G-S(sol) free energy of system = (1) + (5) 104.747 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.64 seconds