Wall clock time and date at job start Sun Mar 7 2021 06:32:39 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00898 * 109.47403 * 2 1 4 4 C 1.46896 * 109.46962 * 120.00844 * 2 1 3 5 5 C 1.46906 * 109.46669 * 240.00781 * 2 1 3 6 6 C 1.53005 * 109.46804 * 175.00286 * 5 2 1 7 7 H 1.08998 * 112.84850 * 43.80326 * 6 5 2 8 8 C 1.53784 * 113.61118 * 174.99766 * 6 5 2 9 9 C 1.53784 * 87.07760 * 140.06447 * 8 6 5 10 10 H 1.08997 * 113.60843 * 219.93397 * 9 8 6 11 11 N 1.46495 * 113.61294 * 89.11473 * 9 8 6 12 12 C 1.34787 * 119.99752 * 154.99437 * 11 9 8 13 13 O 1.21621 * 119.99770 * 0.02562 * 12 11 9 14 14 C 1.47258 * 119.99790 * 179.97438 * 12 11 9 15 15 C 1.36339 * 126.96839 * 180.02562 * 14 12 11 16 16 C 1.51203 * 126.75819 * 0.05709 * 15 14 12 17 17 C 1.53392 * 108.14196 * 164.27717 * 16 15 14 18 18 C 1.53160 * 109.11241 * 48.46496 * 17 16 15 19 19 C 1.53126 * 109.53065 * 290.38207 * 18 17 16 20 20 N 1.35212 * 108.66355 * 179.97438 * 15 14 12 21 21 C 1.36425 * 109.89919 * 359.97430 * 20 15 14 22 22 C 1.50698 * 125.49717 * 180.02562 * 21 20 15 23 23 O 1.42907 * 109.46580 * 30.00382 * 22 21 20 24 24 Si 1.86295 * 109.47229 * 150.00052 * 22 21 20 25 25 C 1.34501 * 109.01037 * 0.02562 * 21 20 15 26 26 C 1.53774 * 87.08121 * 334.56651 * 9 8 6 27 27 H 1.08994 * 109.47254 * 179.97438 * 1 2 3 28 28 H 1.08997 * 109.46573 * 299.99710 * 1 2 3 29 29 H 1.08999 * 109.47044 * 59.98888 * 1 2 3 30 30 H 1.09003 * 109.46717 * 179.97438 * 4 2 1 31 31 H 1.09000 * 109.47394 * 299.99535 * 4 2 1 32 32 H 1.09002 * 109.47483 * 59.99692 * 4 2 1 33 33 H 1.08995 * 109.47588 * 55.00028 * 5 2 1 34 34 H 1.09007 * 109.46762 * 294.99978 * 5 2 1 35 35 H 1.08994 * 113.61335 * 25.51655 * 8 6 5 36 36 H 1.09000 * 113.69262 * 254.62222 * 8 6 5 37 37 H 0.96993 * 120.00512 * 335.00481 * 11 9 8 38 38 H 1.09005 * 109.81010 * 44.59024 * 16 15 14 39 39 H 1.08994 * 109.70536 * 283.90325 * 16 15 14 40 40 H 1.09002 * 109.54525 * 288.55158 * 17 16 15 41 41 H 1.08999 * 109.53833 * 168.37539 * 17 16 15 42 42 H 1.09002 * 109.46330 * 50.40384 * 18 17 16 43 43 H 1.09005 * 109.46114 * 170.36134 * 18 17 16 44 44 H 1.09004 * 109.55909 * 170.80654 * 19 18 17 45 45 H 1.08997 * 109.56603 * 291.02749 * 19 18 17 46 46 H 1.08998 * 109.47382 * 270.00614 * 22 21 20 47 47 H 0.96699 * 113.99695 * 60.00473 * 23 22 21 48 48 H 1.48500 * 110.00122 * 179.97438 * 24 22 21 49 49 H 1.48502 * 110.00357 * 301.32518 * 24 22 21 50 50 H 1.08003 * 126.81301 * 180.02562 * 25 21 20 51 51 H 1.08999 * 113.61609 * 139.98460 * 26 9 8 52 52 H 1.09006 * 113.61854 * 270.88625 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8054 0.9513 0.0000 4 6 1.9586 -0.6927 1.1993 5 6 1.9586 -0.6924 -1.1996 6 6 3.4835 -0.5845 -1.2640 7 1 3.9615 -0.7640 -0.3011 8 6 4.1091 -1.3820 -2.4206 9 6 5.0681 -0.1957 -2.6156 10 1 5.2620 0.0415 -3.6616 11 7 6.2929 -0.2941 -1.8179 12 6 7.4112 0.3424 -2.2190 13 8 7.4033 0.9987 -3.2429 14 6 8.6423 0.2440 -1.4169 15 6 9.8455 0.8256 -1.6869 16 6 10.1809 1.7028 -2.8719 17 6 11.4918 2.4382 -2.5659 18 6 12.5253 1.4296 -2.0557 19 6 12.1169 0.9377 -0.6643 20 7 10.7166 0.4922 -0.7080 21 6 10.0998 -0.3063 0.2103 22 6 10.7455 -0.8798 1.4453 23 8 11.7691 0.0064 1.9028 24 14 9.4610 -1.0860 2.7788 25 6 8.8225 -0.4991 -0.1643 26 6 3.9836 0.6851 -1.9731 27 1 -0.3633 -1.0276 -0.0005 28 1 -0.3632 0.5138 0.8900 29 1 -0.3633 0.5140 -0.8899 30 1 3.0486 -0.6930 1.1990 31 1 1.5954 -0.1789 2.0894 32 1 1.5953 -1.7203 1.1992 33 1 1.5240 -0.2328 -2.0873 34 1 1.6701 -1.7427 -1.1560 35 1 3.4315 -1.5382 -3.2599 36 1 4.6067 -2.2980 -2.1022 37 1 6.2991 -0.8173 -1.0012 38 1 9.3822 2.4268 -3.0334 39 1 10.3045 1.0863 -3.7622 40 1 11.3149 3.1966 -1.8031 41 1 11.8635 2.9137 -3.4735 42 1 12.5751 0.5828 -2.7402 43 1 13.5029 1.9085 -1.9991 44 1 12.7560 0.1053 -0.3694 45 1 12.2206 1.7499 0.0551 46 1 11.1833 -1.8497 1.2094 47 1 11.4506 0.8903 2.1315 48 1 10.0850 -1.6514 4.0020 49 1 8.8340 0.2244 3.0871 50 1 8.0773 -1.0841 0.3542 51 1 4.3797 1.4383 -1.2920 52 1 3.2717 1.0940 -2.6901 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16608396_16915396.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:39 Heat of formation + Delta-G solvation = 126.842329 kcal Electronic energy + Delta-G solvation = -30178.942777 eV Core-core repulsion = 26265.592605 eV Total energy + Delta-G solvation = -3913.350172 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 335.212 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -44.45227 -43.59584 -42.02076 -40.12246 -38.86889 -37.66891 -35.52310 -34.26626 -32.29304 -31.96220 -31.87347 -30.21269 -28.62618 -28.06534 -27.42275 -25.95379 -25.44029 -24.68095 -22.54007 -22.36228 -21.96442 -21.54049 -20.51073 -20.15044 -19.76493 -19.55485 -18.35522 -18.12787 -17.84065 -17.50941 -17.28570 -17.08175 -16.68205 -16.47990 -16.31304 -16.17289 -16.16130 -16.01247 -15.92677 -15.88190 -15.68082 -15.54388 -15.44159 -15.36997 -15.08063 -15.03109 -14.67887 -14.53417 -14.06193 -13.89627 -13.51014 -13.26962 -13.17631 -12.96692 -12.92870 -12.76723 -12.63721 -12.54250 -11.71331 -11.69520 -11.16163 -10.42171 -9.84061 -5.88581 -1.43473 -0.04664 0.17782 0.52898 0.56677 0.58289 0.75892 0.78790 0.86916 1.12201 1.33552 1.37684 1.42276 1.64319 1.69319 1.72902 1.81866 1.83883 1.94674 2.14073 2.22155 2.27123 2.32790 2.34167 2.35515 2.46660 2.64485 2.76434 2.88063 2.99519 3.03733 3.07057 3.11166 3.21142 3.27369 3.36146 3.43454 3.48422 3.51034 3.63810 3.65705 3.71233 3.77205 3.95661 3.97198 4.04183 4.15794 4.28628 4.37558 4.45018 4.47267 4.90629 5.20767 5.39047 5.47030 5.60863 6.45361 Molecular weight = 335.21amu Principal moments of inertia in cm(-1) A = 0.012479 B = 0.003350 C = 0.002765 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2243.148999 B = 8355.102610 C =10122.330407 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.048 4.048 2 N -0.387 5.387 3 H 0.427 0.573 4 C -0.052 4.052 5 C 0.000 4.000 6 C -0.151 4.151 7 H 0.113 0.887 8 C -0.131 4.131 9 C 0.129 3.871 10 H 0.113 0.887 11 N -0.718 5.718 12 C 0.601 3.399 13 O -0.539 6.539 14 C -0.244 4.244 15 C 0.129 3.871 16 C -0.057 4.057 17 C -0.130 4.130 18 C -0.141 4.141 19 C 0.105 3.895 20 N -0.425 5.425 21 C -0.006 4.006 22 C -0.056 4.056 23 O -0.530 6.530 24 Si 0.712 3.288 25 C -0.166 4.166 26 C -0.159 4.159 27 H 0.122 0.878 28 H 0.124 0.876 29 H 0.123 0.877 30 H 0.124 0.876 31 H 0.124 0.876 32 H 0.123 0.877 33 H 0.132 0.868 34 H 0.131 0.869 35 H 0.106 0.894 36 H 0.090 0.910 37 H 0.400 0.600 38 H 0.100 0.900 39 H 0.091 0.909 40 H 0.068 0.932 41 H 0.082 0.918 42 H 0.076 0.924 43 H 0.092 0.908 44 H 0.099 0.901 45 H 0.085 0.915 46 H 0.123 0.877 47 H 0.376 0.624 48 H -0.253 1.253 49 H -0.258 1.258 50 H 0.150 0.850 51 H 0.083 0.917 52 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -27.636 -2.928 4.857 28.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 N 0.038 4.962 3 H 0.262 0.738 4 C -0.194 4.194 5 C -0.121 4.121 6 C -0.170 4.170 7 H 0.131 0.869 8 C -0.170 4.170 9 C 0.023 3.977 10 H 0.131 0.869 11 N -0.370 5.370 12 C 0.391 3.609 13 O -0.417 6.417 14 C -0.254 4.254 15 C 0.010 3.990 16 C -0.095 4.095 17 C -0.168 4.168 18 C -0.178 4.178 19 C -0.015 4.015 20 N -0.101 5.101 21 C -0.115 4.115 22 C -0.165 4.165 23 O -0.336 6.336 24 Si 0.611 3.389 25 C -0.190 4.190 26 C -0.198 4.198 27 H 0.141 0.859 28 H 0.142 0.858 29 H 0.142 0.858 30 H 0.142 0.858 31 H 0.142 0.858 32 H 0.141 0.859 33 H 0.150 0.850 34 H 0.149 0.851 35 H 0.124 0.876 36 H 0.109 0.891 37 H 0.235 0.765 38 H 0.118 0.882 39 H 0.109 0.891 40 H 0.087 0.913 41 H 0.101 0.899 42 H 0.095 0.905 43 H 0.110 0.890 44 H 0.117 0.883 45 H 0.103 0.897 46 H 0.140 0.860 47 H 0.224 0.776 48 H -0.178 1.178 49 H -0.183 1.183 50 H 0.168 0.832 51 H 0.102 0.898 52 H 0.119 0.881 Dipole moment (debyes) X Y Z Total from point charges -27.227 -2.930 4.885 27.816 hybrid contribution 0.793 0.975 0.500 1.352 sum -26.434 -1.955 5.385 27.048 Atomic orbital electron populations 1.24139 0.75633 1.09618 1.09574 1.45035 1.16193 1.19078 1.15939 0.73797 1.24184 1.05976 1.02481 0.86777 1.24141 0.98393 1.02372 0.87220 1.23346 0.90455 1.01303 1.01853 0.86917 1.23337 0.98216 0.98412 0.96992 1.21587 0.83557 0.94761 0.97821 0.86875 1.45391 1.09854 1.53880 1.27873 1.17333 0.81949 0.77818 0.83793 1.90811 1.84724 1.41143 1.24973 1.19663 0.93741 1.11492 1.00489 1.20511 0.88504 0.98324 0.91627 1.20595 0.98238 0.97303 0.93363 1.21732 0.94596 0.97860 1.02594 1.21958 1.00415 1.00324 0.95123 1.22181 0.78830 1.01405 0.99102 1.43951 1.10345 1.37791 1.17992 1.20751 0.93569 1.01706 0.95456 1.24901 0.98756 0.95642 0.97209 1.86633 1.34212 1.26401 1.86351 0.95010 0.81487 0.85087 0.77364 1.21520 0.95112 1.04991 0.97399 1.23741 0.99734 0.95807 1.00507 0.85943 0.85775 0.85843 0.85802 0.85780 0.85854 0.84980 0.85078 0.87571 0.89135 0.76543 0.88201 0.89118 0.91303 0.89916 0.90517 0.88994 0.88287 0.89702 0.85981 0.77567 1.17757 1.18273 0.83214 0.89828 0.88114 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 1.51 9.19 60.06 0.55 2.07 16 2 N -0.39 12.61 0.66 -251.26 -0.17 12.45 16 3 H 0.43 -14.37 8.44 -39.29 -0.33 -14.70 16 4 C -0.05 1.65 8.98 60.06 0.54 2.19 16 5 C 0.00 0.00 4.48 -3.82 -0.02 -0.02 16 6 C -0.15 3.97 3.45 -89.81 -0.31 3.66 16 7 H 0.11 -3.11 6.10 -51.93 -0.32 -3.42 16 8 C -0.13 2.86 7.39 -25.92 -0.19 2.67 16 9 C 0.13 -2.28 4.32 -67.12 -0.29 -2.57 16 10 H 0.11 -1.59 7.46 -51.93 -0.39 -1.98 16 11 N -0.72 11.01 5.26 -54.15 -0.28 10.72 16 12 C 0.60 -5.86 7.81 -12.59 -0.10 -5.96 16 13 O -0.54 3.20 14.93 5.26 0.08 3.28 16 14 C -0.24 2.23 6.28 -103.48 -0.65 1.58 16 15 C 0.13 -1.01 6.57 -81.54 -0.54 -1.54 16 16 C -0.06 0.46 5.34 -27.43 -0.15 0.32 16 17 C -0.13 1.20 5.97 -26.45 -0.16 1.04 16 18 C -0.14 1.35 5.92 -26.58 -0.16 1.19 16 19 C 0.11 -0.98 5.32 -3.70 -0.02 -1.00 16 20 N -0.43 3.63 3.11 -107.30 -0.33 3.30 16 21 C -0.01 0.06 6.15 -81.87 -0.50 -0.44 16 22 C -0.06 0.58 2.99 36.00 0.11 0.69 16 23 O -0.53 4.69 10.68 -35.23 -0.38 4.31 16 24 Si 0.71 -8.49 31.11 -169.99 -5.29 -13.78 16 25 C -0.17 1.90 9.09 -37.47 -0.34 1.55 16 26 C -0.16 3.51 7.43 -25.93 -0.19 3.32 16 27 H 0.12 -3.83 8.14 -51.93 -0.42 -4.25 16 28 H 0.12 -3.90 8.14 -51.93 -0.42 -4.33 16 29 H 0.12 -3.87 8.11 -51.93 -0.42 -4.29 16 30 H 0.12 -3.88 6.10 -51.93 -0.32 -4.19 16 31 H 0.12 -3.91 8.14 -51.93 -0.42 -4.33 16 32 H 0.12 -3.87 8.11 -51.93 -0.42 -4.29 16 33 H 0.13 -4.00 7.79 -51.93 -0.40 -4.41 16 34 H 0.13 -4.00 8.09 -51.92 -0.42 -4.42 16 35 H 0.11 -2.35 8.10 -51.93 -0.42 -2.77 16 36 H 0.09 -1.89 8.14 -51.93 -0.42 -2.32 16 37 H 0.40 -7.28 7.83 -40.82 -0.32 -7.60 16 38 H 0.10 -0.72 7.41 -51.93 -0.38 -1.11 16 39 H 0.09 -0.68 8.14 -51.93 -0.42 -1.11 16 40 H 0.07 -0.62 8.12 -51.93 -0.42 -1.05 16 41 H 0.08 -0.79 8.14 -51.93 -0.42 -1.21 16 42 H 0.08 -0.68 8.11 -51.93 -0.42 -1.10 16 43 H 0.09 -0.95 8.14 -51.93 -0.42 -1.37 16 44 H 0.10 -0.88 7.70 -51.93 -0.40 -1.28 16 45 H 0.08 -0.86 7.94 -51.93 -0.41 -1.27 16 46 H 0.12 -1.29 7.96 -51.93 -0.41 -1.71 16 47 H 0.38 -4.20 8.63 45.56 0.39 -3.80 16 48 H -0.25 1.97 7.11 56.52 0.40 2.37 16 49 H -0.26 2.53 7.11 56.52 0.40 2.93 16 50 H 0.15 -2.36 6.52 -52.48 -0.34 -2.70 16 51 H 0.08 -1.73 8.14 -51.93 -0.42 -2.15 16 52 H 0.10 -2.28 7.90 -51.93 -0.41 -2.69 16 LS Contribution 398.21 15.07 6.00 6.00 Total: 1.00 -37.60 398.21 -11.93 -49.53 By element: Atomic # 1 Polarization: -75.39 SS G_CDS: -9.15 Total: -84.54 kcal Atomic # 6 Polarization: 11.14 SS G_CDS: -2.41 Total: 8.73 kcal Atomic # 7 Polarization: 27.25 SS G_CDS: -0.78 Total: 26.47 kcal Atomic # 8 Polarization: 7.88 SS G_CDS: -0.30 Total: 7.58 kcal Atomic # 14 Polarization: -8.49 SS G_CDS: -5.29 Total: -13.78 kcal Total LS contribution 6.00 Total: 6.00 kcal Total: -37.60 -11.93 -49.53 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_16915396.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 176.377 kcal (2) G-P(sol) polarization free energy of solvation -37.602 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 138.774 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.932 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -49.534 kcal (6) G-S(sol) free energy of system = (1) + (5) 126.842 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds