Wall clock time and date at job start Sun Mar 7 2021 06:32:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46900 * 1 3 3 H 1.00895 * 109.47177 * 2 1 4 4 C 1.46901 * 109.46958 * 120.00221 * 2 1 3 5 5 C 1.46900 * 109.47002 * 239.99977 * 2 1 3 6 6 C 1.53003 * 109.46946 * 175.00218 * 5 2 1 7 7 H 1.09004 * 112.85164 * 316.19196 * 6 5 2 8 8 C 1.53778 * 113.61726 * 87.50503 * 6 5 2 9 9 C 1.53778 * 87.08449 * 139.98071 * 8 6 5 10 10 H 1.08993 * 113.61229 * 220.02023 * 9 8 6 11 11 N 1.46501 * 113.61560 * 89.11214 * 9 8 6 12 12 C 1.34781 * 119.99552 * 107.49938 * 11 9 8 13 13 O 1.21273 * 120.00172 * 0.02562 * 12 11 9 14 14 C 1.50702 * 119.99750 * 179.97438 * 12 11 9 15 15 O 1.42899 * 109.47031 * 180.02562 * 14 12 11 16 16 C 1.35905 * 116.99958 * 180.02562 * 15 14 12 17 17 C 1.38730 * 120.05378 * 359.72340 * 16 15 14 18 18 C 1.38147 * 119.94199 * 179.74572 * 17 16 15 19 19 C 1.38265 * 120.05590 * 0.50461 * 18 17 16 20 20 C 1.50693 * 119.94459 * 179.74638 * 19 18 17 21 21 O 1.42901 * 109.47419 * 120.02968 * 20 19 18 22 22 Si 1.86295 * 109.47186 * 0.02562 * 20 19 18 23 23 C 1.38271 * 120.10832 * 359.77519 * 19 18 17 24 24 C 1.38136 * 120.05811 * 359.97145 * 23 19 18 25 25 C 1.53784 * 87.08081 * 334.56700 * 9 8 6 26 26 H 1.08998 * 109.47051 * 179.97438 * 1 2 3 27 27 H 1.08993 * 109.47444 * 299.99968 * 1 2 3 28 28 H 1.09003 * 109.46992 * 60.00433 * 1 2 3 29 29 H 1.08998 * 109.47362 * 60.00041 * 4 2 1 30 30 H 1.09000 * 109.46557 * 180.02562 * 4 2 1 31 31 H 1.09004 * 109.46693 * 299.99699 * 4 2 1 32 32 H 1.08996 * 109.47281 * 55.00261 * 5 2 1 33 33 H 1.09005 * 109.47555 * 294.99761 * 5 2 1 34 34 H 1.08999 * 113.61111 * 254.53134 * 8 6 5 35 35 H 1.08999 * 113.61280 * 25.34517 * 8 6 5 36 36 H 0.96998 * 120.00259 * 287.50678 * 11 9 8 37 37 H 1.09000 * 109.47285 * 300.00722 * 14 12 11 38 38 H 1.08993 * 109.46779 * 60.00471 * 14 12 11 39 39 H 1.07997 * 120.03137 * 359.97438 * 17 16 15 40 40 H 1.07997 * 119.97096 * 180.28287 * 18 17 16 41 41 H 1.09005 * 109.47106 * 240.02664 * 20 19 18 42 42 H 0.96700 * 113.99253 * 299.99891 * 21 20 19 43 43 H 1.48509 * 110.00093 * 179.97438 * 22 20 19 44 44 H 1.48494 * 110.00209 * 301.31698 * 22 20 19 45 45 H 1.08001 * 119.96774 * 179.97438 * 23 19 18 46 46 H 1.08005 * 120.03233 * 179.97438 * 24 23 19 47 47 H 1.09004 * 113.61451 * 270.88641 * 25 9 8 48 48 H 1.08994 * 113.61477 * 139.97943 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9512 0.0000 4 6 1.9586 -0.6926 1.1994 5 6 1.9586 -0.6925 -1.1994 6 6 3.4835 -0.5846 -1.2638 7 1 3.8474 0.4156 -1.0285 8 6 4.2130 -1.7029 -0.5010 9 6 5.2160 -1.7359 -1.6662 10 1 5.5283 -2.7422 -1.9451 11 7 6.3430 -0.8154 -1.4967 12 6 7.5687 -1.2966 -1.2088 13 8 7.7385 -2.4916 -1.0906 14 6 8.7282 -0.3498 -1.0350 15 8 9.9109 -1.0947 -0.7380 16 6 11.0554 -0.3862 -0.5501 17 6 11.0414 0.9970 -0.6551 18 6 12.2049 1.7153 -0.4585 19 6 13.3849 1.0560 -0.1675 20 6 14.6539 1.8416 0.0409 21 8 15.1556 1.5961 1.3563 22 14 14.2987 3.6594 -0.1591 23 6 13.4026 -0.3230 -0.0680 24 6 12.2408 -1.0455 -0.2586 25 6 4.0890 -1.1738 -2.5488 26 1 -0.3633 -1.0276 -0.0005 27 1 -0.3634 0.5138 0.8899 28 1 -0.3633 0.5138 -0.8901 29 1 1.5953 -1.7202 1.1994 30 1 3.0486 -0.6921 1.1996 31 1 1.5953 -0.1786 2.0894 32 1 1.5241 -0.2330 -2.0871 33 1 1.6703 -1.7428 -1.1558 34 1 4.6500 -1.3748 0.4421 35 1 3.6277 -2.6169 -0.4010 36 1 6.2072 0.1403 -1.5915 37 1 8.8766 0.2156 -1.9549 38 1 8.5162 0.3376 -0.2162 39 1 10.1209 1.5122 -0.8868 40 1 12.1936 2.7924 -0.5356 41 1 15.3969 1.5335 -0.6947 42 1 14.5452 1.8471 2.0631 43 1 15.5423 4.4453 0.0447 44 1 13.7467 3.9232 -1.5121 45 1 14.3257 -0.8357 0.1590 46 1 12.2552 -2.1226 -0.1812 47 1 3.4703 -1.9437 -3.0099 48 1 4.4260 -0.4186 -3.2589 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_2989410.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:47 Heat of formation + Delta-G solvation = 59.195763 kcal Electronic energy + Delta-G solvation = -26653.989549 eV Core-core repulsion = 22795.524959 eV Total energy + Delta-G solvation = -3858.464590 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 322.185 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.29472 -41.55791 -40.76611 -39.40545 -38.72029 -37.14599 -34.67702 -32.43577 -31.76533 -30.58490 -29.51940 -29.18223 -26.70730 -26.31497 -25.76882 -24.23088 -23.70085 -22.55963 -21.89684 -20.65017 -19.55827 -19.06283 -18.47908 -18.20678 -17.77759 -17.52001 -17.32146 -16.97755 -16.81280 -16.38024 -16.01213 -15.75783 -15.61344 -15.44906 -15.06516 -14.81857 -14.66830 -14.36104 -14.07118 -13.80530 -13.75378 -13.62991 -13.54930 -13.53771 -13.41533 -13.28510 -13.05095 -12.74757 -12.29381 -12.14729 -12.10630 -12.08545 -11.75940 -11.68495 -11.36769 -11.08601 -10.43594 -10.20305 -10.07827 -9.26031 -5.03076 0.23975 0.27352 1.05157 1.31572 1.36293 1.43354 1.61442 1.99331 2.53132 2.62491 2.89139 2.97333 3.21817 3.35831 3.45331 3.49647 3.54275 3.69822 3.74711 3.78575 3.80358 3.92515 4.00520 4.04109 4.07130 4.19809 4.22129 4.28108 4.35335 4.38777 4.42057 4.47000 4.53257 4.63352 4.71288 4.72622 4.77964 4.79655 4.85453 4.89642 4.93724 4.94952 5.03153 5.11734 5.12812 5.20728 5.48118 5.49212 5.65719 6.22214 6.41681 6.77739 7.09475 Molecular weight = 322.19amu Principal moments of inertia in cm(-1) A = 0.021651 B = 0.002065 C = 0.001975 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1292.957743 B =13553.327803 C =14173.507819 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.046 4.046 2 N -0.367 5.367 3 H 0.440 0.560 4 C -0.057 4.057 5 C 0.007 3.993 6 C -0.115 4.115 7 H 0.137 0.863 8 C -0.152 4.152 9 C 0.089 3.911 10 H 0.063 0.937 11 N -0.690 5.690 12 C 0.514 3.486 13 O -0.574 6.574 14 C 0.031 3.969 15 O -0.322 6.322 16 C 0.123 3.877 17 C -0.195 4.195 18 C -0.076 4.076 19 C -0.161 4.161 20 C -0.079 4.079 21 O -0.560 6.560 22 Si 0.789 3.211 23 C -0.064 4.064 24 C -0.168 4.168 25 C -0.126 4.126 26 H 0.115 0.885 27 H 0.124 0.876 28 H 0.127 0.873 29 H 0.117 0.883 30 H 0.117 0.883 31 H 0.127 0.873 32 H 0.150 0.850 33 H 0.133 0.867 34 H 0.082 0.918 35 H 0.107 0.893 36 H 0.424 0.576 37 H 0.122 0.878 38 H 0.134 0.866 39 H 0.173 0.827 40 H 0.155 0.845 41 H 0.098 0.902 42 H 0.395 0.605 43 H -0.311 1.311 44 H -0.277 1.277 45 H 0.126 0.874 46 H 0.123 0.877 47 H 0.108 0.892 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -40.428 7.074 2.570 41.123 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.188 4.188 2 N 0.056 4.944 3 H 0.277 0.723 4 C -0.200 4.200 5 C -0.115 4.115 6 C -0.133 4.133 7 H 0.155 0.845 8 C -0.191 4.191 9 C -0.016 4.016 10 H 0.082 0.918 11 N -0.345 5.345 12 C 0.300 3.700 13 O -0.452 6.452 14 C -0.047 4.047 15 O -0.236 6.236 16 C 0.078 3.922 17 C -0.213 4.213 18 C -0.093 4.093 19 C -0.162 4.162 20 C -0.188 4.188 21 O -0.368 6.368 22 Si 0.696 3.304 23 C -0.082 4.082 24 C -0.187 4.187 25 C -0.165 4.165 26 H 0.134 0.866 27 H 0.143 0.857 28 H 0.146 0.854 29 H 0.135 0.865 30 H 0.136 0.864 31 H 0.146 0.854 32 H 0.168 0.832 33 H 0.151 0.849 34 H 0.101 0.899 35 H 0.125 0.875 36 H 0.263 0.737 37 H 0.140 0.860 38 H 0.151 0.849 39 H 0.190 0.810 40 H 0.172 0.828 41 H 0.116 0.884 42 H 0.245 0.755 43 H -0.240 1.240 44 H -0.204 1.204 45 H 0.144 0.856 46 H 0.141 0.859 47 H 0.127 0.873 48 H 0.106 0.894 Dipole moment (debyes) X Y Z Total from point charges -39.777 6.256 1.888 40.311 hybrid contribution 1.075 -0.497 -0.445 1.265 sum -38.702 5.758 1.442 39.155 Atomic orbital electron populations 1.24117 0.75598 1.09342 1.09785 1.44806 1.15885 1.19299 1.14401 0.72267 1.24271 1.05658 1.02572 0.87482 1.23928 0.95424 1.03428 0.88695 1.23007 0.92478 1.01007 0.96842 0.84489 1.23791 0.97259 1.00325 0.97691 1.22035 0.85969 0.93930 0.99661 0.91815 1.45250 1.06229 1.11508 1.71478 1.20528 0.84951 0.88571 0.75933 1.90805 1.84798 1.18776 1.50847 1.22841 0.82218 0.93800 1.05817 1.86135 1.15721 1.36144 1.85562 1.19113 0.85633 0.91173 0.96264 1.21501 1.01181 0.91514 1.07090 1.21095 0.91226 1.00475 0.96540 1.20349 0.96113 0.94430 1.05263 1.25243 0.94980 1.11206 0.87352 1.86483 1.46991 1.88482 1.14878 0.93852 0.81684 0.71896 0.83001 1.20886 0.97409 0.93751 0.96204 1.20599 0.91132 1.00804 1.06148 1.23274 0.95166 1.01671 0.96372 0.86609 0.85708 0.85407 0.86451 0.86417 0.85448 0.83221 0.84924 0.89905 0.87512 0.73736 0.85990 0.84886 0.81004 0.82796 0.88408 0.75506 1.23966 1.20408 0.85569 0.85854 0.87328 0.89354 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.05 3.04 9.19 127.69 1.17 4.21 16 2 N -0.37 24.93 0.66 -948.84 -0.62 24.31 16 3 H 0.44 -31.86 8.40 -89.70 -0.75 -32.61 16 4 C -0.06 3.63 8.57 127.69 1.09 4.72 16 5 C 0.01 -0.46 4.57 86.30 0.39 -0.06 16 6 C -0.11 6.44 3.18 -10.27 -0.03 6.40 16 7 H 0.14 -8.31 8.10 -2.39 -0.02 -8.33 16 8 C -0.15 7.06 5.69 31.12 0.18 7.24 16 9 C 0.09 -3.23 4.32 45.52 0.20 -3.04 16 10 H 0.06 -1.62 7.47 -2.39 -0.02 -1.64 16 11 N -0.69 23.94 5.26 -440.04 -2.32 21.63 16 12 C 0.51 -11.46 7.91 87.66 0.69 -10.77 16 13 O -0.57 4.76 16.10 16.03 0.26 5.02 16 14 C 0.03 -0.79 5.22 71.24 0.37 -0.42 16 15 O -0.32 4.16 9.67 -73.45 -0.71 3.45 16 16 C 0.12 -1.66 6.69 22.51 0.15 -1.51 16 17 C -0.19 3.87 9.04 22.37 0.20 4.07 16 18 C -0.08 1.37 8.66 22.25 0.19 1.56 16 19 C -0.16 2.09 5.39 -19.85 -0.11 1.99 16 20 C -0.08 0.96 2.82 71.23 0.20 1.16 16 21 O -0.56 5.89 12.77 -148.98 -1.90 3.98 16 22 Si 0.79 -12.13 29.78 68.60 2.04 -10.09 16 23 C -0.06 0.64 9.60 22.25 0.21 0.85 16 24 C -0.17 1.59 9.99 22.36 0.22 1.82 16 25 C -0.13 5.77 7.39 31.12 0.23 6.00 16 26 H 0.12 -7.32 8.14 -2.39 -0.02 -7.34 16 27 H 0.12 -8.05 8.14 -2.39 -0.02 -8.07 16 28 H 0.13 -8.36 8.11 -2.39 -0.02 -8.38 16 29 H 0.12 -7.21 8.11 -2.39 -0.02 -7.23 16 30 H 0.12 -7.18 5.13 -2.39 -0.01 -7.19 16 31 H 0.13 -8.06 8.14 -2.39 -0.02 -8.08 16 32 H 0.15 -9.79 8.09 -2.39 -0.02 -9.81 16 33 H 0.13 -8.29 7.79 -2.38 -0.02 -8.31 16 34 H 0.08 -3.74 7.18 -2.39 -0.02 -3.75 16 35 H 0.11 -4.99 7.89 -2.39 -0.02 -5.01 16 36 H 0.42 -18.53 8.70 -92.71 -0.81 -19.34 16 37 H 0.12 -3.80 7.65 -2.39 -0.02 -3.82 16 38 H 0.13 -4.48 7.67 -2.39 -0.02 -4.50 16 39 H 0.17 -5.04 6.30 -2.91 -0.02 -5.06 16 40 H 0.15 -3.58 4.87 -2.91 -0.01 -3.60 16 41 H 0.10 -0.95 7.96 -2.38 -0.02 -0.97 16 42 H 0.40 -7.59 8.70 -74.06 -0.64 -8.24 16 43 H -0.31 1.77 7.11 99.48 0.71 2.48 16 44 H -0.28 3.42 7.11 99.48 0.71 4.12 16 45 H 0.13 -1.17 8.06 -2.91 -0.02 -1.19 16 46 H 0.12 -1.04 8.06 -2.91 -0.02 -1.06 16 47 H 0.11 -4.92 8.10 -2.39 -0.02 -4.94 16 48 H 0.09 -3.93 8.14 -2.39 -0.02 -3.95 16 Total: 1.00 -94.20 381.61 0.94 -93.27 By element: Atomic # 1 Polarization: -164.62 SS G_CDS: -1.18 Total: -165.80 kcal Atomic # 6 Polarization: 18.87 SS G_CDS: 5.37 Total: 24.24 kcal Atomic # 7 Polarization: 48.87 SS G_CDS: -2.94 Total: 45.93 kcal Atomic # 8 Polarization: 14.80 SS G_CDS: -2.35 Total: 12.45 kcal Atomic # 14 Polarization: -12.13 SS G_CDS: 2.04 Total: -10.09 kcal Total: -94.20 0.94 -93.27 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_2989410.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 152.462 kcal (2) G-P(sol) polarization free energy of solvation -94.205 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 58.257 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.939 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.266 kcal (6) G-S(sol) free energy of system = (1) + (5) 59.196 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds