Wall clock time and date at job start Sun Mar 7 2021 06:32:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 N 1.46898 * 1 3 3 H 1.00906 * 109.46781 * 2 1 4 4 C 1.46895 * 109.46952 * 119.99927 * 2 1 3 5 5 C 1.46900 * 109.47454 * 240.00465 * 2 1 3 6 6 C 1.52997 * 109.47389 * 64.99705 * 5 2 1 7 7 H 1.08996 * 112.84943 * 43.80279 * 6 5 2 8 8 C 1.53783 * 113.61593 * 175.00247 * 6 5 2 9 9 C 1.53784 * 87.08106 * 140.06472 * 8 6 5 10 10 H 1.09003 * 113.61225 * 219.93229 * 9 8 6 11 11 N 1.46497 * 113.61126 * 89.11729 * 9 8 6 12 12 C 1.34780 * 119.99566 * 156.53132 * 11 9 8 13 13 O 1.21280 * 120.00423 * 359.97438 * 12 11 9 14 14 C 1.50701 * 119.99795 * 180.02562 * 12 11 9 15 15 C 1.52997 * 109.47212 * 179.97438 * 14 12 11 16 16 O 1.42895 * 109.47503 * 180.02562 * 15 14 12 17 17 C 1.35900 * 117.00356 * 180.02562 * 16 15 14 18 18 C 1.38728 * 120.05549 * 359.72471 * 17 16 15 19 19 C 1.38148 * 119.94480 * 179.74612 * 18 17 16 20 20 C 1.38266 * 120.05356 * 0.50590 * 19 18 17 21 21 C 1.50700 * 119.94119 * 179.74695 * 20 19 18 22 22 O 1.42899 * 109.47089 * 245.02241 * 21 20 19 23 23 Si 1.86295 * 109.47209 * 5.02328 * 21 20 19 24 24 C 1.38259 * 120.11046 * 359.76719 * 20 19 18 25 25 C 1.38145 * 120.06180 * 359.97438 * 24 20 19 26 26 C 1.53787 * 87.17236 * 334.52503 * 9 8 6 27 27 H 1.08993 * 109.47552 * 300.00144 * 1 2 3 28 28 H 1.09007 * 109.47312 * 60.00333 * 1 2 3 29 29 H 1.09006 * 109.47108 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.46857 * 180.02562 * 4 2 1 31 31 H 1.09004 * 109.47386 * 300.00175 * 4 2 1 32 32 H 1.08997 * 109.47501 * 60.00419 * 4 2 1 33 33 H 1.09003 * 109.46629 * 304.99645 * 5 2 1 34 34 H 1.08995 * 109.47114 * 185.00387 * 5 2 1 35 35 H 1.09005 * 113.61336 * 25.51804 * 8 6 5 36 36 H 1.08994 * 113.61689 * 254.61223 * 8 6 5 37 37 H 0.96995 * 120.00423 * 336.52437 * 11 9 8 38 38 H 1.09002 * 109.47060 * 299.99722 * 14 12 11 39 39 H 1.09001 * 109.47380 * 59.99809 * 14 12 11 40 40 H 1.09002 * 109.47153 * 299.99998 * 15 14 12 41 41 H 1.08998 * 109.47533 * 59.99628 * 15 14 12 42 42 H 1.08004 * 120.02452 * 359.97438 * 18 17 16 43 43 H 1.08002 * 119.97189 * 180.22949 * 19 18 17 44 44 H 1.09003 * 109.46757 * 125.02059 * 21 20 19 45 45 H 0.96697 * 114.00531 * 59.99679 * 22 21 20 46 46 H 1.48505 * 109.99953 * 180.02562 * 23 21 20 47 47 H 1.48503 * 109.99896 * 301.31665 * 23 21 20 48 48 H 1.08008 * 119.97239 * 179.97438 * 24 20 19 49 49 H 1.07998 * 120.03366 * 179.97438 * 25 24 20 50 50 H 1.09002 * 113.60719 * 140.02586 * 26 9 8 51 51 H 1.09004 * 113.61242 * 270.92355 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 7 1.4690 0.0000 0.0000 3 1 1.8053 0.9514 0.0000 4 6 1.9586 -0.6925 1.1994 5 6 1.9587 -0.6924 -1.1995 6 6 1.5540 0.0978 -2.4455 7 1 1.7119 1.1707 -2.3361 8 6 2.1236 -0.4787 -3.7525 9 6 0.7631 -0.1590 -4.3942 10 1 0.4125 -0.9295 -5.0810 11 7 0.6848 1.1887 -4.9632 12 6 -0.2061 1.4578 -5.9381 13 8 -0.9428 0.5843 -6.3445 14 6 -0.2862 2.8440 -6.5239 15 6 -1.3697 2.8796 -7.6035 16 8 -1.4453 4.1938 -8.1594 17 6 -2.3651 4.3976 -9.1388 18 6 -3.1744 3.3525 -9.5603 19 6 -4.1123 3.5635 -10.5524 20 6 -4.2377 4.8123 -11.1325 21 6 -5.2577 5.0381 -12.2186 22 8 -4.5892 5.3452 -13.4436 23 14 -6.2815 3.4974 -12.4391 24 6 -3.4285 5.8540 -10.7182 25 6 -2.4927 5.6496 -9.7228 26 6 0.1581 -0.2686 -2.9846 27 1 -0.3634 0.5138 0.8899 28 1 -0.3634 0.5138 -0.8901 29 1 -0.3634 -1.0277 -0.0005 30 1 3.0486 -0.6921 1.1996 31 1 1.5952 -0.1786 2.0894 32 1 1.5953 -1.7201 1.1994 33 1 1.5241 -1.6910 -1.2454 34 1 3.0450 -0.7706 -1.1557 35 1 2.3420 -1.5453 -3.7006 36 1 2.9479 0.1037 -4.1639 37 1 1.2741 1.8873 -4.6384 38 1 -0.5331 3.5571 -5.7373 39 1 0.6748 3.1081 -6.9652 40 1 -1.1225 2.1666 -8.3900 41 1 -2.3309 2.6154 -7.1626 42 1 -3.0737 2.3758 -9.1105 43 1 -4.7451 2.7512 -10.8782 44 1 -5.9065 5.8688 -11.9406 45 1 -3.9936 4.6486 -13.7520 46 1 -7.2910 3.7070 -13.5079 47 1 -5.4048 2.3505 -12.7871 48 1 -3.5280 6.8284 -11.1732 49 1 -1.8605 6.4635 -9.3998 50 1 -0.6031 0.4833 -2.7766 51 1 -0.1598 -1.2780 -2.7232 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_4549602.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:32:52 Heat of formation + Delta-G solvation = 51.598425 kcal Electronic energy + Delta-G solvation = -28241.052355 eV Core-core repulsion = 24226.720700 eV Total energy + Delta-G solvation = -4014.331654 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.201 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.27921 -41.42332 -40.90768 -39.39938 -38.96475 -37.34006 -34.61949 -33.31658 -32.07407 -31.49451 -30.09449 -29.49910 -26.83573 -26.67569 -26.04467 -25.40133 -23.93452 -23.42094 -22.30825 -21.63691 -20.60303 -19.59562 -19.08373 -18.50783 -18.03192 -17.63810 -17.53140 -17.30473 -17.18768 -16.83426 -16.44502 -16.17904 -16.05482 -15.75102 -15.45174 -15.15873 -14.79791 -14.68659 -14.48819 -14.33141 -14.18017 -13.94635 -13.74584 -13.55438 -13.53937 -13.50950 -13.29172 -13.06419 -12.93280 -12.86133 -12.71631 -12.32174 -12.15302 -12.10428 -11.82917 -11.68540 -11.62393 -11.35607 -11.12699 -10.63390 -10.14862 -10.07612 -9.26775 -4.98208 0.23995 0.26899 1.04114 1.27869 1.45449 1.53535 1.65460 1.92180 2.42797 2.61045 2.88557 2.96751 3.20611 3.35473 3.40600 3.47307 3.51249 3.67281 3.72407 3.77964 3.79118 3.84894 3.87337 3.98760 4.03577 4.19125 4.21277 4.22464 4.30129 4.34455 4.40133 4.41270 4.52166 4.53133 4.63411 4.64564 4.71641 4.71958 4.75231 4.77535 4.80525 4.85390 4.88620 4.94032 4.95118 5.03303 5.13628 5.14711 5.23966 5.46791 5.53130 5.67504 6.27813 6.40199 6.45253 7.12969 Molecular weight = 336.20amu Principal moments of inertia in cm(-1) A = 0.027269 B = 0.001641 C = 0.001619 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1026.551247 B =17059.603702 C =17286.916149 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.057 4.057 2 N -0.368 5.368 3 H 0.439 0.561 4 C -0.047 4.047 5 C 0.008 3.992 6 C -0.117 4.117 7 H 0.133 0.867 8 C -0.128 4.128 9 C 0.090 3.910 10 H 0.066 0.934 11 N -0.697 5.697 12 C 0.522 3.478 13 O -0.583 6.583 14 C -0.133 4.133 15 C 0.068 3.932 16 O -0.320 6.320 17 C 0.126 3.874 18 C -0.208 4.208 19 C -0.082 4.082 20 C -0.158 4.158 21 C -0.076 4.076 22 O -0.549 6.549 23 Si 0.762 3.238 24 C -0.060 4.060 25 C -0.158 4.158 26 C -0.151 4.151 27 H 0.127 0.873 28 H 0.117 0.883 29 H 0.118 0.882 30 H 0.127 0.873 31 H 0.124 0.876 32 H 0.116 0.884 33 H 0.134 0.866 34 H 0.149 0.851 35 H 0.109 0.891 36 H 0.085 0.915 37 H 0.421 0.579 38 H 0.132 0.868 39 H 0.123 0.877 40 H 0.059 0.941 41 H 0.068 0.932 42 H 0.142 0.858 43 H 0.141 0.859 44 H 0.125 0.875 45 H 0.385 0.615 46 H -0.307 1.307 47 H -0.284 1.284 48 H 0.138 0.862 49 H 0.143 0.857 50 H 0.081 0.919 51 H 0.107 0.893 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 17.698 -11.342 39.002 44.306 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.199 4.199 2 N 0.055 4.945 3 H 0.276 0.724 4 C -0.188 4.188 5 C -0.114 4.114 6 C -0.135 4.135 7 H 0.150 0.850 8 C -0.166 4.166 9 C -0.016 4.016 10 H 0.085 0.915 11 N -0.350 5.350 12 C 0.309 3.691 13 O -0.463 6.463 14 C -0.173 4.173 15 C -0.008 4.008 16 O -0.234 6.234 17 C 0.080 3.920 18 C -0.226 4.226 19 C -0.100 4.100 20 C -0.159 4.159 21 C -0.186 4.186 22 O -0.358 6.358 23 Si 0.668 3.332 24 C -0.079 4.079 25 C -0.176 4.176 26 C -0.190 4.190 27 H 0.145 0.855 28 H 0.135 0.865 29 H 0.137 0.863 30 H 0.146 0.854 31 H 0.143 0.857 32 H 0.135 0.865 33 H 0.152 0.848 34 H 0.167 0.833 35 H 0.127 0.873 36 H 0.103 0.897 37 H 0.259 0.741 38 H 0.150 0.850 39 H 0.141 0.859 40 H 0.077 0.923 41 H 0.086 0.914 42 H 0.160 0.840 43 H 0.158 0.842 44 H 0.143 0.857 45 H 0.234 0.766 46 H -0.235 1.235 47 H -0.211 1.211 48 H 0.156 0.844 49 H 0.161 0.839 50 H 0.100 0.900 51 H 0.126 0.874 Dipole moment (debyes) X Y Z Total from point charges 16.662 -12.180 38.358 43.558 hybrid contribution 0.935 0.345 -1.331 1.663 sum 17.597 -11.835 37.027 42.670 Atomic orbital electron populations 1.24268 0.76779 1.09490 1.09406 1.44817 1.15508 1.19527 1.14616 0.72378 1.24122 1.05811 1.02276 0.86637 1.23922 1.06055 0.99402 0.82034 1.23039 0.95615 1.02106 0.92747 0.84955 1.23264 0.95440 1.03698 0.94229 1.22020 0.99623 0.84222 0.95688 0.91513 1.45451 1.38500 1.12975 1.38060 1.20554 0.79630 0.89724 0.79175 1.90780 1.43963 1.49580 1.61948 1.21451 1.01472 0.94940 0.99438 1.22510 1.00316 0.81671 0.96263 1.85953 1.54402 1.33185 1.49861 1.19112 0.89426 0.94365 0.89064 1.21390 0.99665 0.99581 1.01996 1.21033 0.97085 0.96506 0.95343 1.20225 1.00750 0.94405 1.00486 1.25114 0.97701 1.12752 0.82995 1.86578 1.62512 1.47157 1.39513 0.94214 0.78278 0.73513 0.87151 1.20997 0.93143 0.99356 0.94359 1.20667 1.02005 0.95785 0.99162 1.23825 0.96927 1.04029 0.94177 0.85486 0.86488 0.86310 0.85435 0.85713 0.86496 0.84778 0.83333 0.87264 0.89665 0.74128 0.84972 0.85909 0.92290 0.91371 0.84048 0.84156 0.85733 0.76581 1.23534 1.21118 0.84445 0.83929 0.90034 0.87428 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.06 3.58 8.57 127.69 1.09 4.68 16 2 N -0.37 24.75 0.66 -948.87 -0.62 24.12 16 3 H 0.44 -31.33 8.41 -89.69 -0.75 -32.08 16 4 C -0.05 3.02 9.19 127.69 1.17 4.20 16 5 C 0.01 -0.49 4.57 86.30 0.39 -0.10 16 6 C -0.12 6.44 3.19 -10.17 -0.03 6.40 16 7 H 0.13 -7.80 8.09 -2.39 -0.02 -7.82 16 8 C -0.13 5.78 7.38 31.12 0.23 6.01 16 9 C 0.09 -3.28 4.30 45.52 0.20 -3.09 16 10 H 0.07 -1.78 7.50 -2.39 -0.02 -1.80 16 11 N -0.70 24.05 5.26 -440.02 -2.32 21.73 16 12 C 0.52 -12.75 7.83 87.66 0.69 -12.06 16 13 O -0.58 7.87 15.60 -3.03 -0.05 7.83 16 14 C -0.13 3.51 6.07 29.85 0.18 3.69 16 15 C 0.07 -1.21 4.03 71.98 0.29 -0.92 16 16 O -0.32 4.29 10.14 -92.43 -0.94 3.36 16 17 C 0.13 -1.33 6.69 22.51 0.15 -1.18 16 18 C -0.21 2.35 9.04 22.37 0.20 2.55 16 19 C -0.08 0.92 8.66 22.25 0.19 1.11 16 20 C -0.16 1.59 5.35 -19.85 -0.11 1.49 16 21 C -0.08 0.76 2.80 71.24 0.20 0.96 16 22 O -0.55 3.49 12.83 -148.98 -1.91 1.58 16 23 Si 0.76 -8.24 29.88 68.60 2.05 -6.19 16 24 C -0.06 0.60 9.68 22.25 0.22 0.81 16 25 C -0.16 1.65 9.99 22.37 0.22 1.87 16 26 C -0.15 7.00 5.71 31.22 0.18 7.18 16 27 H 0.13 -7.98 8.14 -2.39 -0.02 -8.00 16 28 H 0.12 -7.07 5.14 -2.38 -0.01 -7.08 16 29 H 0.12 -7.29 8.11 -2.38 -0.02 -7.31 16 30 H 0.13 -8.27 8.11 -2.39 -0.02 -8.29 16 31 H 0.12 -7.99 8.14 -2.38 -0.02 -8.01 16 32 H 0.12 -7.37 8.14 -2.39 -0.02 -7.39 16 33 H 0.13 -8.35 7.80 -2.39 -0.02 -8.37 16 34 H 0.15 -9.61 8.09 -2.39 -0.02 -9.63 16 35 H 0.11 -4.94 8.10 -2.38 -0.02 -4.96 16 36 H 0.08 -3.70 8.14 -2.39 -0.02 -3.72 16 37 H 0.42 -17.54 8.70 -92.71 -0.81 -18.35 16 38 H 0.13 -4.12 8.14 -2.39 -0.02 -4.14 16 39 H 0.12 -3.54 8.14 -2.39 -0.02 -3.56 16 40 H 0.06 -0.89 7.61 -2.39 -0.02 -0.91 16 41 H 0.07 -1.15 7.63 -2.39 -0.02 -1.17 16 42 H 0.14 -1.97 6.30 -2.91 -0.02 -1.98 16 43 H 0.14 -2.00 4.83 -2.91 -0.01 -2.01 16 44 H 0.12 -1.45 7.96 -2.39 -0.02 -1.47 16 45 H 0.39 -4.52 8.70 -74.06 -0.64 -5.16 16 46 H -0.31 0.68 7.11 99.48 0.71 1.39 16 47 H -0.28 2.04 7.01 99.48 0.70 2.74 16 48 H 0.14 -1.54 8.06 -2.91 -0.02 -1.56 16 49 H 0.14 -1.88 8.06 -2.91 -0.02 -1.90 16 50 H 0.08 -3.65 7.19 -2.39 -0.02 -3.67 16 51 H 0.11 -5.06 7.91 -2.39 -0.02 -5.08 16 Total: 1.00 -85.70 402.69 0.45 -85.25 By element: Atomic # 1 Polarization: -160.06 SS G_CDS: -1.23 Total: -161.29 kcal Atomic # 6 Polarization: 18.14 SS G_CDS: 5.47 Total: 23.61 kcal Atomic # 7 Polarization: 48.80 SS G_CDS: -2.94 Total: 45.86 kcal Atomic # 8 Polarization: 15.66 SS G_CDS: -2.90 Total: 12.76 kcal Atomic # 14 Polarization: -8.24 SS G_CDS: 2.05 Total: -6.19 kcal Total: -85.70 0.45 -85.25 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_4549602.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 136.846 kcal (2) G-P(sol) polarization free energy of solvation -85.696 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.150 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.449 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -85.248 kcal (6) G-S(sol) free energy of system = (1) + (5) 51.598 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds