Wall clock time and date at job start Sun Mar 7 2021 06:33:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42911 * 1 3 3 C 1.35980 * 116.99783 * 2 1 4 4 C 1.38679 * 120.00066 * 180.02562 * 3 2 1 5 5 C 1.38148 * 120.00117 * 179.74150 * 4 3 2 6 6 C 1.50699 * 120.00309 * 180.24541 * 5 4 3 7 7 O 1.42898 * 109.47140 * 105.25518 * 6 5 4 8 8 Si 1.86308 * 109.46895 * 345.26040 * 6 5 4 9 9 C 1.38678 * 120.00119 * 0.51105 * 5 4 3 10 10 O 1.35980 * 120.00319 * 179.74150 * 9 5 4 11 11 C 1.42899 * 117.00288 * 179.72332 * 10 9 5 12 12 C 1.50695 * 109.47400 * 180.02562 * 11 10 9 13 13 O 1.21282 * 119.99917 * 359.97438 * 12 11 10 14 14 N 1.34772 * 120.00305 * 180.02562 * 12 11 10 15 15 C 1.46506 * 120.00033 * 179.97438 * 14 12 11 16 16 H 1.08992 * 112.90684 * 336.24748 * 15 14 12 17 17 C 1.54049 * 113.61276 * 107.61836 * 15 14 12 18 18 C 1.53781 * 87.08031 * 89.07129 * 17 15 14 19 19 H 1.08999 * 113.61181 * 270.87794 * 18 17 15 20 20 C 1.52991 * 113.61611 * 139.97702 * 18 17 15 21 21 N 1.46905 * 109.47546 * 87.50100 * 20 18 17 22 22 H 1.00899 * 109.46630 * 55.00246 * 21 20 18 23 23 C 1.46897 * 109.47326 * 175.00122 * 21 20 18 24 24 C 1.46899 * 109.46784 * 295.00313 * 21 20 18 25 25 C 1.53781 * 87.08070 * 25.42738 * 18 17 15 26 26 C 1.38718 * 119.99937 * 359.46118 * 9 5 4 27 27 C 1.38116 * 119.99739 * 0.28662 * 26 9 5 28 28 H 1.08999 * 109.46904 * 60.00486 * 1 2 3 29 29 H 1.08993 * 109.46873 * 179.97438 * 1 2 3 30 30 H 1.09000 * 109.47212 * 300.00272 * 1 2 3 31 31 H 1.07998 * 119.99396 * 0.02562 * 4 3 2 32 32 H 1.08999 * 109.47846 * 225.26167 * 6 5 4 33 33 H 0.96696 * 114.00562 * 300.00976 * 7 6 5 34 34 H 1.48500 * 109.99816 * 58.68071 * 8 6 5 35 35 H 1.48493 * 109.99881 * 179.97438 * 8 6 5 36 36 H 1.08997 * 109.47308 * 59.99614 * 11 10 9 37 37 H 1.09001 * 109.46756 * 299.99749 * 11 10 9 38 38 H 0.97002 * 120.00078 * 359.97438 * 14 12 11 39 39 H 1.09005 * 113.62125 * 334.52173 * 17 15 14 40 40 H 1.08996 * 113.68970 * 203.62749 * 17 15 14 41 41 H 1.08997 * 109.47550 * 207.50008 * 20 18 17 42 42 H 1.09002 * 109.47334 * 327.50277 * 20 18 17 43 43 H 1.08999 * 109.47501 * 60.00304 * 23 21 20 44 44 H 1.09003 * 109.47141 * 180.02562 * 23 21 20 45 45 H 1.08998 * 109.47145 * 299.99831 * 23 21 20 46 46 H 1.09003 * 109.46527 * 179.97438 * 24 21 20 47 47 H 1.08999 * 109.47194 * 299.99176 * 24 21 20 48 48 H 1.08997 * 109.47233 * 60.00092 * 24 21 20 49 49 H 1.09002 * 113.61445 * 89.11830 * 25 18 17 50 50 H 1.09002 * 113.61408 * 219.93560 * 25 18 17 51 51 H 1.07995 * 120.00501 * 180.30231 * 26 9 5 52 52 H 1.08000 * 119.99711 * 179.97438 * 27 26 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4291 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4313 1.2843 -0.0005 5 6 4.0584 2.5152 -0.0059 6 6 5.5633 2.5941 -0.0121 7 8 6.0152 2.9700 -1.3146 8 14 6.2742 0.9313 0.4359 9 6 3.3032 3.6782 -0.0001 10 8 3.9204 4.8898 -0.0001 11 6 3.0805 6.0459 -0.0001 12 6 3.9346 7.2875 -0.0007 13 8 5.1437 7.1917 -0.0007 14 7 3.3551 8.5042 -0.0003 15 6 4.1855 9.7112 -0.0003 16 1 5.1832 9.5397 0.4037 17 6 4.1828 10.4619 -1.3455 18 6 2.9620 11.2362 -0.8212 19 1 2.0103 10.7544 -1.0453 20 6 2.9769 12.7225 -1.1837 21 7 2.3539 12.9117 -2.5006 22 1 1.4293 12.5079 -2.4963 23 6 2.2598 14.3476 -2.7961 24 6 3.1713 12.2528 -3.5281 25 6 3.4827 10.9424 0.5956 26 6 1.9179 3.6057 -0.0001 27 6 1.2909 2.3750 0.0000 28 1 -0.3633 0.5138 -0.8900 29 1 -0.3633 -1.0276 -0.0005 30 1 -0.3634 0.5139 0.8900 31 1 4.0194 0.3785 -0.0014 32 1 5.8913 3.3372 0.7148 33 1 5.7590 2.3526 -2.0133 34 1 5.8089 -0.0967 -0.5294 35 1 7.7578 0.9957 0.4327 36 1 2.4512 6.0379 0.8899 37 1 2.4513 6.0378 -0.8901 38 1 2.3881 8.5808 0.0001 39 1 3.9609 9.8242 -2.2012 40 1 5.0625 11.0866 -1.5001 41 1 2.4200 13.2849 -0.4343 42 1 4.0066 13.0787 -1.2144 43 1 3.2587 14.7838 -2.8007 44 1 1.7972 14.4879 -3.7730 45 1 1.6534 14.8364 -2.0337 46 1 2.7088 12.3928 -4.5051 47 1 4.1702 12.6891 -3.5327 48 1 3.2410 11.1874 -3.3089 49 1 4.1715 11.6982 0.9731 50 1 2.6954 10.6939 1.3074 51 1 1.3296 4.5113 -0.0005 52 1 0.2124 2.3185 0.0004 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_4974302.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:48 Heat of formation + Delta-G solvation = 28.389575 kcal Electronic energy + Delta-G solvation = -31459.501106 eV Core-core repulsion = 27125.480849 eV Total energy + Delta-G solvation = -4334.020258 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -42.30234 -41.78727 -40.97393 -39.98530 -39.05170 -38.25478 -36.99533 -34.66501 -32.85971 -31.20826 -30.37401 -29.53145 -29.07891 -27.97132 -26.71029 -26.68160 -25.83090 -24.13155 -23.52678 -22.47626 -21.97781 -20.65961 -19.70497 -19.10189 -18.79159 -18.52483 -17.94502 -17.71316 -17.55955 -17.31903 -17.23049 -16.82946 -16.65731 -16.12524 -16.11429 -15.80604 -15.61298 -15.35492 -15.13924 -14.95659 -14.67257 -14.36873 -14.07494 -14.04637 -13.77042 -13.61393 -13.56090 -13.49750 -13.46182 -13.30410 -13.06876 -13.04370 -12.76410 -12.51912 -12.48162 -12.16367 -11.91858 -11.80205 -11.69370 -11.44711 -11.37952 -11.05999 -10.62398 -10.19403 -10.15391 -8.81985 -5.00712 0.03667 0.34122 1.03372 1.22380 1.38807 1.45846 1.50308 1.86418 2.32937 2.52530 2.57150 2.87279 2.95854 3.20368 3.34647 3.37386 3.44634 3.49398 3.62218 3.71658 3.74734 3.77583 3.93874 4.02505 4.06676 4.08190 4.11345 4.18264 4.20234 4.22205 4.33393 4.39754 4.40424 4.40978 4.44797 4.51936 4.66785 4.70193 4.71321 4.76492 4.76880 4.78113 4.83986 4.88082 4.93664 4.95515 5.01876 5.11155 5.12374 5.20408 5.41002 5.49822 6.16829 6.38195 6.44139 6.47605 7.11490 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.014444 B = 0.002114 C = 0.001946 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 1938.002121 B =13239.636611 C =14383.718207 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.339 6.339 3 C 0.086 3.914 4 C -0.129 4.129 5 C -0.118 4.118 6 C -0.065 4.065 7 O -0.542 6.542 8 Si 0.759 3.241 9 C 0.105 3.895 10 O -0.311 6.311 11 C 0.031 3.969 12 C 0.513 3.487 13 O -0.571 6.571 14 N -0.691 5.691 15 C 0.090 3.910 16 H 0.063 0.937 17 C -0.153 4.153 18 C -0.115 4.115 19 H 0.136 0.864 20 C 0.008 3.992 21 N -0.367 5.367 22 H 0.440 0.560 23 C -0.046 4.046 24 C -0.057 4.057 25 C -0.125 4.125 26 C -0.159 4.159 27 C -0.158 4.158 28 H 0.067 0.933 29 H 0.109 0.891 30 H 0.070 0.930 31 H 0.139 0.861 32 H 0.110 0.890 33 H 0.382 0.618 34 H -0.278 1.278 35 H -0.302 1.302 36 H 0.123 0.877 37 H 0.125 0.875 38 H 0.423 0.577 39 H 0.080 0.920 40 H 0.106 0.894 41 H 0.151 0.849 42 H 0.133 0.867 43 H 0.115 0.885 44 H 0.124 0.876 45 H 0.128 0.872 46 H 0.127 0.873 47 H 0.117 0.883 48 H 0.116 0.884 49 H 0.109 0.891 50 H 0.089 0.911 51 H 0.172 0.828 52 H 0.160 0.840 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -15.944 36.152 -7.805 40.275 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.254 6.254 3 C 0.041 3.959 4 C -0.148 4.148 5 C -0.119 4.119 6 C -0.174 4.174 7 O -0.349 6.349 8 Si 0.665 3.335 9 C 0.060 3.940 10 O -0.224 6.224 11 C -0.047 4.047 12 C 0.300 3.700 13 O -0.448 6.448 14 N -0.346 5.346 15 C -0.016 4.016 16 H 0.082 0.918 17 C -0.192 4.192 18 C -0.133 4.133 19 H 0.154 0.846 20 C -0.114 4.114 21 N 0.056 4.944 22 H 0.277 0.723 23 C -0.188 4.188 24 C -0.200 4.200 25 C -0.163 4.163 26 C -0.177 4.177 27 C -0.176 4.176 28 H 0.086 0.914 29 H 0.128 0.872 30 H 0.089 0.911 31 H 0.157 0.843 32 H 0.128 0.872 33 H 0.231 0.769 34 H -0.204 1.204 35 H -0.231 1.231 36 H 0.141 0.859 37 H 0.142 0.858 38 H 0.262 0.738 39 H 0.098 0.902 40 H 0.125 0.875 41 H 0.169 0.831 42 H 0.151 0.849 43 H 0.134 0.866 44 H 0.143 0.857 45 H 0.147 0.853 46 H 0.145 0.855 47 H 0.136 0.864 48 H 0.134 0.866 49 H 0.127 0.873 50 H 0.107 0.893 51 H 0.189 0.811 52 H 0.178 0.822 Dipole moment (debyes) X Y Z Total from point charges -13.819 35.894 -7.729 39.231 hybrid contribution -0.560 -0.368 -1.053 1.248 sum -14.379 35.526 -8.782 39.319 Atomic orbital electron populations 1.23338 0.76351 1.05454 1.02479 1.86095 1.23450 1.26814 1.89026 1.19010 0.92001 0.85341 0.99596 1.20283 0.92659 0.97195 1.04618 1.19316 0.95932 0.90669 1.05994 1.24906 0.92117 1.12583 0.87813 1.86633 1.78832 1.52519 1.16963 0.94061 0.76765 0.73171 0.89528 1.18720 0.91382 0.84411 0.99508 1.86211 1.35244 1.11884 1.89075 1.22793 0.92864 0.82388 1.06680 1.20518 0.88168 0.85796 0.75556 1.90821 1.17130 1.87340 1.49525 1.45243 1.11043 1.03354 1.74935 1.22074 0.95371 0.84374 0.99734 0.91810 1.23841 0.99571 0.99106 0.96657 1.22995 1.00168 0.93524 0.96652 0.84589 1.23928 1.05020 0.98609 0.83874 1.44808 1.19037 1.16270 1.14278 0.72287 1.24121 1.09175 0.77166 1.08372 1.24263 0.99782 1.02612 0.93326 1.23262 1.00938 0.95580 0.96549 1.21377 0.91968 0.99862 1.04521 1.21424 1.01536 0.90948 1.03736 0.91409 0.87250 0.91145 0.84320 0.87169 0.76890 1.20429 1.23056 0.85899 0.85761 0.73847 0.90168 0.87547 0.83102 0.84915 0.86590 0.85729 0.85331 0.85456 0.86428 0.86550 0.87268 0.89276 0.81060 0.82209 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.32 9.81 113.37 1.11 0.80 16 2 O -0.34 3.24 10.50 -93.32 -0.98 2.26 16 3 C 0.09 -0.92 6.69 22.49 0.15 -0.77 16 4 C -0.13 1.20 8.59 22.35 0.19 1.39 16 5 C -0.12 1.10 5.27 -19.78 -0.10 0.99 16 6 C -0.06 0.47 2.37 71.24 0.17 0.64 16 7 O -0.54 2.36 12.88 -148.98 -1.92 0.44 16 8 Si 0.76 -6.46 30.24 68.60 2.07 -4.38 16 9 C 0.11 -1.31 6.66 22.49 0.15 -1.16 16 10 O -0.31 3.57 9.00 -74.29 -0.67 2.90 16 11 C 0.03 -0.73 5.22 71.23 0.37 -0.36 16 12 C 0.51 -10.63 7.91 87.66 0.69 -9.93 16 13 O -0.57 3.71 16.10 16.00 0.26 3.96 16 14 N -0.69 23.03 5.26 -439.60 -2.31 20.72 16 15 C 0.09 -3.14 4.34 45.61 0.20 -2.94 16 16 H 0.06 -1.54 7.47 -2.39 -0.02 -1.56 16 17 C -0.15 6.90 5.70 31.21 0.18 7.08 16 18 C -0.11 6.32 3.18 -10.27 -0.03 6.29 16 19 H 0.14 -8.09 8.10 -2.39 -0.02 -8.11 16 20 C 0.01 -0.48 4.57 86.30 0.39 -0.08 16 21 N -0.37 24.63 0.66 -948.87 -0.62 24.01 16 22 H 0.44 -31.48 8.41 -89.70 -0.75 -32.23 16 23 C -0.05 3.00 9.19 127.69 1.17 4.18 16 24 C -0.06 3.56 8.57 127.69 1.09 4.66 16 25 C -0.12 5.60 7.38 31.12 0.23 5.83 16 26 C -0.16 2.99 9.03 22.36 0.20 3.19 16 27 C -0.16 2.65 9.03 22.36 0.20 2.85 16 28 H 0.07 -1.37 7.66 -2.39 -0.02 -1.39 16 29 H 0.11 -2.08 8.14 -2.39 -0.02 -2.10 16 30 H 0.07 -1.43 7.66 -2.39 -0.02 -1.45 16 31 H 0.14 -1.29 4.86 -2.91 -0.01 -1.30 16 32 H 0.11 -0.62 7.82 -2.39 -0.02 -0.64 16 33 H 0.38 -4.13 8.70 -74.06 -0.64 -4.77 16 34 H -0.28 1.51 6.69 99.48 0.67 2.18 16 35 H -0.30 0.22 7.11 99.48 0.71 0.93 16 36 H 0.12 -3.71 7.66 -2.39 -0.02 -3.73 16 37 H 0.12 -3.87 7.66 -2.39 -0.02 -3.89 16 38 H 0.42 -17.92 8.70 -92.71 -0.81 -18.73 16 39 H 0.08 -3.47 7.18 -2.38 -0.02 -3.49 16 40 H 0.11 -4.83 7.89 -2.39 -0.02 -4.85 16 41 H 0.15 -9.79 8.09 -2.39 -0.02 -9.81 16 42 H 0.13 -8.19 7.79 -2.39 -0.02 -8.21 16 43 H 0.12 -7.26 8.14 -2.39 -0.02 -7.28 16 44 H 0.12 -7.95 8.14 -2.39 -0.02 -7.97 16 45 H 0.13 -8.34 8.11 -2.39 -0.02 -8.36 16 46 H 0.13 -7.93 8.14 -2.39 -0.02 -7.95 16 47 H 0.12 -7.11 8.11 -2.39 -0.02 -7.12 16 48 H 0.12 -6.94 5.13 -2.39 -0.01 -6.95 16 49 H 0.11 -4.88 8.10 -2.39 -0.02 -4.90 16 50 H 0.09 -3.91 8.14 -2.39 -0.02 -3.93 16 51 H 0.17 -4.80 6.29 -2.91 -0.02 -4.82 16 52 H 0.16 -3.57 6.29 -2.91 -0.02 -3.59 16 Total: 1.00 -94.43 410.35 0.95 -93.49 By element: Atomic # 1 Polarization: -164.78 SS G_CDS: -1.25 Total: -166.04 kcal Atomic # 6 Polarization: 16.28 SS G_CDS: 6.37 Total: 22.65 kcal Atomic # 7 Polarization: 47.66 SS G_CDS: -2.94 Total: 44.73 kcal Atomic # 8 Polarization: 12.87 SS G_CDS: -3.31 Total: 9.56 kcal Atomic # 14 Polarization: -6.46 SS G_CDS: 2.07 Total: -4.38 kcal Total: -94.43 0.95 -93.49 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_4974302.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 121.877 kcal (2) G-P(sol) polarization free energy of solvation -94.434 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.443 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.946 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -93.488 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.390 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds