Wall clock time and date at job start Sun Mar 7 2021 06:33:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 1 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42894 * 1 3 3 C 1.35900 * 117.00302 * 2 1 4 4 C 1.38607 * 120.02822 * 180.02562 * 3 2 1 5 5 C 1.38655 * 119.89002 * 180.02562 * 4 3 2 6 6 O 1.35899 * 120.02723 * 179.72714 * 5 4 3 7 7 C 1.42902 * 117.00158 * 359.97438 * 6 5 4 8 8 C 1.50696 * 109.47375 * 180.02562 * 7 6 5 9 9 O 1.21290 * 119.99769 * 359.97438 * 8 7 6 10 10 N 1.34779 * 120.00209 * 180.02562 * 8 7 6 11 11 C 1.46494 * 119.99928 * 180.02562 * 10 8 7 12 12 H 1.09000 * 112.85338 * 336.19200 * 11 10 8 13 13 C 1.53776 * 113.61646 * 107.50317 * 11 10 8 14 14 C 1.53779 * 87.08410 * 89.11468 * 13 11 10 15 15 H 1.09002 * 113.69009 * 270.87858 * 14 13 11 16 16 C 1.52994 * 113.61645 * 139.98232 * 14 13 11 17 17 N 1.46899 * 109.47173 * 87.50372 * 16 14 13 18 18 H 1.00902 * 109.47074 * 55.00431 * 17 16 14 19 19 C 1.46903 * 109.47185 * 174.99654 * 17 16 14 20 20 C 1.46894 * 109.47083 * 295.00103 * 17 16 14 21 21 C 1.53778 * 87.08196 * 25.43223 * 14 13 11 22 22 C 1.38749 * 119.94596 * 359.97438 * 5 4 3 23 23 C 1.50705 * 119.97388 * 179.97438 * 22 5 4 24 24 O 1.42894 * 109.47516 * 285.00644 * 23 22 5 25 25 Si 1.86303 * 109.47138 * 165.00174 * 23 22 5 26 26 C 1.38194 * 120.05431 * 0.02562 * 22 5 4 27 27 C 1.38159 * 120.11035 * 359.97438 * 26 22 5 28 28 H 1.09006 * 109.47440 * 300.00345 * 1 2 3 29 29 H 1.09004 * 109.47015 * 60.00078 * 1 2 3 30 30 H 1.08996 * 109.47599 * 180.02562 * 1 2 3 31 31 H 1.08003 * 120.06004 * 0.04404 * 4 3 2 32 32 H 1.09003 * 109.46964 * 300.00788 * 7 6 5 33 33 H 1.08997 * 109.46893 * 60.00320 * 7 6 5 34 34 H 0.96999 * 119.99893 * 359.97438 * 10 8 7 35 35 H 1.09005 * 113.61336 * 203.66168 * 13 11 10 36 36 H 1.08995 * 113.61530 * 334.56620 * 13 11 10 37 37 H 1.09008 * 109.47283 * 207.50250 * 16 14 13 38 38 H 1.08992 * 109.47449 * 327.50070 * 16 14 13 39 39 H 1.08999 * 109.46962 * 60.00194 * 19 17 16 40 40 H 1.09004 * 109.47145 * 179.97438 * 19 17 16 41 41 H 1.09001 * 109.47328 * 300.00090 * 19 17 16 42 42 H 1.09000 * 109.47422 * 60.00009 * 20 17 16 43 43 H 1.09004 * 109.47347 * 180.02562 * 20 17 16 44 44 H 1.08999 * 109.47013 * 299.99775 * 20 17 16 45 45 H 1.08999 * 113.61833 * 220.02226 * 21 14 13 46 46 H 1.09003 * 113.68864 * 89.12866 * 21 14 13 47 47 H 1.08999 * 109.46601 * 45.00548 * 23 22 5 48 48 H 0.96698 * 114.00369 * 179.97438 * 24 23 22 49 49 H 1.48493 * 110.00020 * 298.68820 * 25 23 22 50 50 H 1.48500 * 109.99532 * 60.00380 * 25 23 22 51 51 H 1.08008 * 119.94573 * 179.97438 * 26 22 5 52 52 H 1.07993 * 119.97249 * 179.97438 * 27 26 22 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0460 1.2108 0.0000 4 6 3.4301 1.2840 -0.0005 5 6 4.0567 2.5209 0.0000 6 8 5.4136 2.5959 0.0051 7 6 6.1316 1.3604 0.0103 8 6 7.6124 1.6399 0.0160 9 8 8.0135 2.7846 0.0153 10 7 8.4912 0.6180 0.0210 11 6 9.9306 0.8898 0.0272 12 1 10.1779 1.8710 -0.3781 13 6 10.6086 0.5890 1.3743 14 6 10.8270 -0.8420 0.8556 15 1 10.0017 -1.5189 1.0769 16 6 12.1911 -1.4270 1.2268 17 7 12.1060 -2.0693 2.5452 18 1 11.3635 -2.7525 2.5392 19 6 13.3803 -2.7340 2.8492 20 6 11.8278 -1.0525 3.5682 21 6 10.7756 -0.2514 -0.5634 22 6 3.2972 3.6820 0.0005 23 6 3.9775 5.0268 0.0017 24 8 4.5034 5.2935 1.3033 25 14 2.7441 6.3472 -0.4524 26 6 1.9173 3.6065 0.0011 27 6 1.2906 2.3752 0.0005 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0276 0.0005 31 1 4.0197 0.3791 -0.0017 32 1 5.8664 0.7897 0.9003 33 1 5.8734 0.7864 -0.8796 34 1 8.1704 -0.2974 0.0212 35 1 11.5343 1.1429 1.5305 36 1 9.9312 0.6459 2.2263 37 1 12.4848 -2.1658 0.4810 38 1 12.9323 -0.6286 1.2588 39 1 14.1825 -1.9961 2.8557 40 1 13.3174 -3.2102 3.8277 41 1 13.5868 -3.4885 2.0902 42 1 10.8822 -0.5593 3.3426 43 1 11.7651 -1.5290 4.5466 44 1 12.6300 -0.3146 3.5746 45 1 10.2329 -0.8729 -1.2756 46 1 11.7464 0.0729 -0.9382 47 1 4.7901 5.0234 -0.7248 48 1 4.9565 6.1445 1.3777 49 1 2.2134 6.0988 -1.8168 50 1 1.6311 6.3620 0.5306 51 1 1.3278 4.5115 0.0019 52 1 0.2121 2.3187 0.0014 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=1 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16608396_4974312.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Sun Mar 7 2021 06:33:53 Heat of formation + Delta-G solvation = 28.120308 kcal Electronic energy + Delta-G solvation = -31561.491591 eV Core-core repulsion = 27227.459657 eV Total energy + Delta-G solvation = -4334.031934 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 352.200 amu Computer time = 1.16 seconds Orbital eigenvalues (eV) -42.31341 -41.92500 -41.01728 -40.09533 -39.07572 -38.20521 -37.08277 -34.67780 -32.54070 -31.66743 -30.51139 -29.52860 -29.16498 -28.48796 -26.70839 -26.16655 -25.84127 -24.22698 -23.59562 -22.52960 -22.02231 -20.66505 -20.03015 -19.09510 -18.59573 -18.43929 -18.06382 -17.72959 -17.55704 -17.43393 -17.30041 -16.93350 -16.79664 -16.74889 -15.92484 -15.75052 -15.71350 -15.36026 -15.24855 -14.94823 -14.67494 -14.18644 -14.06876 -13.92026 -13.78854 -13.69865 -13.55661 -13.50883 -13.45672 -13.29436 -13.28942 -13.06504 -12.76758 -12.61565 -12.53832 -12.16241 -12.03603 -12.00317 -11.79229 -11.69194 -11.37177 -11.10505 -10.27955 -10.20789 -9.87925 -9.27914 -4.99854 -0.01476 0.11866 1.03922 1.26087 1.32029 1.35645 1.57752 1.87736 2.08352 2.35877 2.45843 2.88094 2.96435 3.20759 3.34888 3.39083 3.44934 3.48307 3.52146 3.73107 3.77541 3.80162 3.83905 3.94927 3.98768 4.02781 4.04835 4.14789 4.18863 4.20940 4.23213 4.27538 4.28778 4.34076 4.40951 4.46466 4.52454 4.66491 4.70434 4.71726 4.77147 4.78391 4.82155 4.84557 4.88370 4.93812 5.02489 5.03232 5.09555 5.12094 5.24376 5.48853 5.97828 6.18133 6.35950 6.86079 7.06540 Molecular weight = 352.20amu Principal moments of inertia in cm(-1) A = 0.012475 B = 0.002256 C = 0.002019 Principal moments of inertia in units of 10**(-40)*gram-cm**2 A = 2243.903705 B =12408.492447 C =13866.670410 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.016 3.984 2 O -0.322 6.322 3 C 0.166 3.834 4 C -0.242 4.242 5 C 0.185 3.815 6 O -0.297 6.297 7 C 0.026 3.974 8 C 0.518 3.482 9 O -0.564 6.564 10 N -0.691 5.691 11 C 0.091 3.909 12 H 0.067 0.933 13 C -0.152 4.152 14 C -0.117 4.117 15 H 0.134 0.866 16 C 0.008 3.992 17 N -0.368 5.368 18 H 0.439 0.561 19 C -0.046 4.046 20 C -0.057 4.057 21 C -0.125 4.125 22 C -0.167 4.167 23 C -0.062 4.062 24 O -0.561 6.561 25 Si 0.766 3.234 26 C -0.060 4.060 27 C -0.244 4.244 28 H 0.064 0.936 29 H 0.064 0.936 30 H 0.123 0.877 31 H 0.170 0.830 32 H 0.124 0.876 33 H 0.121 0.879 34 H 0.422 0.578 35 H 0.109 0.891 36 H 0.080 0.920 37 H 0.150 0.850 38 H 0.135 0.865 39 H 0.116 0.884 40 H 0.124 0.876 41 H 0.128 0.872 42 H 0.116 0.884 43 H 0.126 0.874 44 H 0.119 0.881 45 H 0.086 0.914 46 H 0.111 0.889 47 H 0.071 0.929 48 H 0.397 0.603 49 H -0.289 1.289 50 H -0.285 1.285 51 H 0.129 0.871 52 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 28.401 -22.218 8.816 37.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.078 4.078 2 O -0.235 6.235 3 C 0.119 3.881 4 C -0.261 4.261 5 C 0.138 3.862 6 O -0.209 6.209 7 C -0.052 4.052 8 C 0.304 3.696 9 O -0.442 6.442 10 N -0.346 5.346 11 C -0.014 4.014 12 H 0.086 0.914 13 C -0.190 4.190 14 C -0.136 4.136 15 H 0.152 0.848 16 C -0.114 4.114 17 N 0.055 4.945 18 H 0.276 0.724 19 C -0.188 4.188 20 C -0.200 4.200 21 C -0.164 4.164 22 C -0.168 4.168 23 C -0.172 4.172 24 O -0.371 6.371 25 Si 0.671 3.329 26 C -0.077 4.077 27 C -0.263 4.263 28 H 0.083 0.917 29 H 0.083 0.917 30 H 0.141 0.859 31 H 0.187 0.813 32 H 0.142 0.858 33 H 0.139 0.861 34 H 0.260 0.740 35 H 0.128 0.872 36 H 0.099 0.901 37 H 0.168 0.832 38 H 0.153 0.847 39 H 0.135 0.865 40 H 0.142 0.858 41 H 0.146 0.854 42 H 0.134 0.866 43 H 0.145 0.855 44 H 0.137 0.863 45 H 0.105 0.895 46 H 0.129 0.871 47 H 0.089 0.911 48 H 0.247 0.753 49 H -0.216 1.216 50 H -0.212 1.212 51 H 0.146 0.854 52 H 0.167 0.833 Dipole moment (debyes) X Y Z Total from point charges 28.041 -21.661 8.716 36.489 hybrid contribution -0.981 -0.602 -0.214 1.171 sum 27.060 -22.262 8.502 36.058 Atomic orbital electron populations 1.23403 0.76112 1.05954 1.02366 1.86041 1.23554 1.26007 1.87849 1.18839 0.92030 0.84565 0.92622 1.20608 0.92865 0.97672 1.14980 1.18369 0.82198 0.92534 0.93078 1.86202 1.14618 1.32139 1.87979 1.22880 0.89185 0.86386 1.06740 1.20287 0.88127 0.85461 0.75724 1.90802 1.80524 1.23411 1.49429 1.45254 1.05382 1.09092 1.74855 1.22048 0.79140 1.00441 0.99794 0.91413 1.23796 1.02135 0.96516 0.96594 1.23006 0.97599 0.96232 0.96720 0.84847 1.23926 1.00283 1.03421 0.83753 1.44815 1.18230 1.17087 1.14321 0.72361 1.24123 0.84335 1.02126 1.08242 1.24267 1.08048 0.94252 0.93416 1.23273 1.01136 0.95496 0.96493 1.18900 0.92666 0.93614 1.11618 1.24565 1.04516 0.99281 0.88816 1.86429 1.77411 1.44190 1.29020 0.94232 0.77396 0.85236 0.76048 1.20749 0.92961 0.98091 0.95932 1.21338 1.01548 0.91551 1.11820 0.91729 0.91742 0.85882 0.81308 0.85828 0.86115 0.73961 0.87244 0.90144 0.83210 0.84739 0.86488 0.85764 0.85395 0.86557 0.85517 0.86278 0.89489 0.87057 0.91098 0.75259 1.21580 1.21197 0.85398 0.83282 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.26 9.81 113.37 1.11 0.85 16 2 O -0.32 3.59 10.49 -92.42 -0.97 2.62 16 3 C 0.17 -1.54 6.68 22.49 0.15 -1.39 16 4 C -0.24 2.86 8.97 22.46 0.20 3.06 16 5 C 0.18 -1.45 6.66 22.49 0.15 -1.30 16 6 O -0.30 2.78 9.00 -73.38 -0.66 2.12 16 7 C 0.03 -0.56 5.22 71.23 0.37 -0.18 16 8 C 0.52 -10.51 7.91 87.66 0.69 -9.82 16 9 O -0.56 4.37 16.10 15.98 0.26 4.62 16 10 N -0.69 22.62 5.26 -440.04 -2.32 20.30 16 11 C 0.09 -3.20 4.32 45.52 0.20 -3.00 16 12 H 0.07 -1.70 7.46 -2.39 -0.02 -1.72 16 13 C -0.15 6.87 5.69 31.12 0.18 7.05 16 14 C -0.12 6.40 3.18 -10.27 -0.03 6.36 16 15 H 0.13 -7.82 8.10 -2.39 -0.02 -7.83 16 16 C 0.01 -0.50 4.57 86.30 0.39 -0.11 16 17 N -0.37 24.55 0.66 -948.86 -0.62 23.92 16 18 H 0.44 -31.14 8.40 -89.69 -0.75 -31.90 16 19 C -0.05 2.99 9.19 127.69 1.17 4.16 16 20 C -0.06 3.56 8.57 127.69 1.09 4.65 16 21 C -0.13 5.61 7.39 31.12 0.23 5.84 16 22 C -0.17 0.79 5.31 -19.75 -0.10 0.68 16 23 C -0.06 0.45 2.36 71.24 0.17 0.62 16 24 O -0.56 3.95 12.86 -148.98 -1.92 2.04 16 25 Si 0.77 -7.70 30.20 68.60 2.07 -5.62 16 26 C -0.06 0.31 8.65 22.24 0.19 0.51 16 27 C -0.24 1.96 9.04 22.38 0.20 2.16 16 28 H 0.06 -1.10 7.66 -2.38 -0.02 -1.12 16 29 H 0.06 -1.10 7.66 -2.38 -0.02 -1.11 16 30 H 0.12 -2.48 8.14 -2.39 -0.02 -2.50 16 31 H 0.17 -3.31 6.30 -2.91 -0.02 -3.33 16 32 H 0.12 -3.42 7.67 -2.39 -0.02 -3.44 16 33 H 0.12 -3.24 7.66 -2.39 -0.02 -3.25 16 34 H 0.42 -17.31 8.70 -92.71 -0.81 -18.11 16 35 H 0.11 -5.04 7.90 -2.38 -0.02 -5.06 16 36 H 0.08 -3.49 7.18 -2.39 -0.02 -3.51 16 37 H 0.15 -9.66 8.09 -2.38 -0.02 -9.68 16 38 H 0.13 -8.32 7.79 -2.39 -0.02 -8.34 16 39 H 0.12 -7.33 8.14 -2.39 -0.02 -7.34 16 40 H 0.12 -7.89 8.14 -2.39 -0.02 -7.91 16 41 H 0.13 -8.26 8.11 -2.39 -0.02 -8.28 16 42 H 0.12 -6.91 5.13 -2.39 -0.01 -6.92 16 43 H 0.13 -7.85 8.14 -2.39 -0.02 -7.87 16 44 H 0.12 -7.22 8.11 -2.39 -0.02 -7.24 16 45 H 0.09 -3.76 8.14 -2.39 -0.02 -3.78 16 46 H 0.11 -4.99 8.10 -2.39 -0.02 -5.01 16 47 H 0.07 -0.54 7.83 -2.39 -0.02 -0.56 16 48 H 0.40 -6.61 8.74 -74.06 -0.65 -7.26 16 49 H -0.29 1.32 7.11 99.48 0.71 2.03 16 50 H -0.28 1.31 6.74 99.48 0.67 1.98 16 51 H 0.13 -0.74 4.89 -2.91 -0.01 -0.75 16 52 H 0.15 -1.79 6.29 -2.91 -0.02 -1.81 16 Total: 1.00 -92.44 410.42 0.96 -91.48 By element: Atomic # 1 Polarization: -160.39 SS G_CDS: -1.25 Total: -161.64 kcal Atomic # 6 Polarization: 13.78 SS G_CDS: 6.37 Total: 20.15 kcal Atomic # 7 Polarization: 47.17 SS G_CDS: -2.94 Total: 44.23 kcal Atomic # 8 Polarization: 14.69 SS G_CDS: -3.29 Total: 11.40 kcal Atomic # 14 Polarization: -7.70 SS G_CDS: 2.07 Total: -5.62 kcal Total: -92.44 0.96 -91.48 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16608396_4974312.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 119.598 kcal (2) G-P(sol) polarization free energy of solvation -92.441 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 27.157 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.963 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -91.477 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.120 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.16 seconds